BAC Information

Click to search

BAC

Clone NameB6Ng01-141B22
Chromosome14 (Build37)
Map Location 16,476,536 - 16,477,674
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042147, Slc4a7, Nek10, Lrrc3b
Downstream geneLOC667205, 1700062C10Rik, LOC667209, EG435389, Oxsm, Ngly1, Top2b, Rarb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141B22.bB6Ng01-141B22.g
ACCDH939661DH939662
length1,131367
definitionDH939661|Mus musculus domesticus DNA, BAC clone: B6Ng01-141B22, 5' end.DH939662|Mus musculus domesticus DNA, BAC clone: B6Ng01-141B22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttccatcattctccacctcatctcttggggcagggtacaaatgg
acataatagacttttgtgtatgttctggggatctagacttaagcctttga
cctagttaccatagttgtcaactcatcacaccctagactcagctgagtaa
ctgatactggcaagataactttggcttccccatgcctgtgttgacattga
cttgattgttaattgatatgggagaaccatcccactattagtggcatgtt
ccctatgcacgtggtcctgaattgtaagaaagccagttaagtagaagcct
gggagcaagtatttatttggaccaacagacagcatacctctatggatctt
tatccctactttgagttcctggcgtgatattcctcagtgatggattgtga
ccttgaagtgtaagtcaaataaaccctttcttctacaggttgctttggtt
agagtgttttgttagggacagaaaagaaactagaacaattctcatgcttg
cacatcaagcattttgtctatcaagccttctccccaacctggattgtcag
ccttaacctgataatttttttcagtcctttaaaacatctaaggcaatata
actttcagagggctatcaaaggaaaacttcacagtgcaaattaaatcatt
agcactgcatgagatgagttcaatagagtcataatatactggaagccaat
ggacagctgtagaggcatgttttcaatggagtcaagctttctctctgctg
agtagtgtttagctgattacagttaagaccctcccctcttactggaactt
gtattacatggatcaacttccttactgagtgcacttcatcgaatcacctc
tagggccttgagaaaagcccttctggtgtttgaaacctgcatggggcaga
gaagatttgtatatcagaagggagaaacagaattaatttataaatcctat
agtaaatggtctaagtaaaaggaggagctagagacagacaaaatgtacta
ctagggaagtatagtcaagctgtgaatgtatgcctttgatggttaaatga
agctgaattcagctcaactccacgtttggctgggaaacaaacaagatatt
tcattattatagataaatttttctttgctga

aataccaatgggcagatacatctgcaaaaccctcttgaaacttaggctca
gggaacattgtggaagaacagcaaaaagattcaaagagccagaggatcat
tgatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtga
gattctgtctcctagtaatatctgaagctacatccataaagtctcatcaa
catgactacctaaatattatctggacaaggacaacagtagagatgccaaa
ggaaagaaggaaagaccacaccaggtatcaaccctatacaaagaactact
ggtgcctggaaataaaaaccaacaataggaaaaatagttttccctgggga
atgatttaagttggtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_16476536_16477674
seq2: B6Ng01-141B22.b_46_1176 (reverse)

seq1  TCAGCAAAGAAAAAATTTAATTCTAATAATATATGAAATA-CTTTGTTGT  49
      ||||||||| |||||||||  ||| |||||| |||||||| |||  ||||
seq2  TCAGCAAAG-AAAAATTTA--TCT-ATAATA-ATGAAATATCTTGTTTGT  45

seq1  TTCCCAGCCAACCTGTGAAGTTGAGCTGAATTCAGCTTCATTTAA-CATC  98
      ||||||||||| | ||| ||||||||||||||||||||||||||| ||||
seq2  TTCCCAGCCAAAC-GTGGAGTTGAGCTGAATTCAGCTTCATTTAACCATC  94

seq1  AAAGGCCATACA-TCACAGCTTGACTATACTT-CCTAGTAGTTACATTTT  146
      ||||| |||||| ||||||||||||||||||| |||||||| ||||||||
seq2  AAAGG-CATACATTCACAGCTTGACTATACTTCCCTAGTAG-TACATTTT  142

seq1  GTTCTTGTCTCTAGCTCCTTCCTTTTACTTAGACCATTTACTTATAGGAT  196
      ||   ||||||||||||| |||||||||||||||||||||| ||||||||
seq2  GT--CTGTCTCTAGCTCC-TCCTTTTACTTAGACCATTTAC-TATAGGAT  188

seq1  TTATAAATTAATTCTGTTTCTCCCTTCTGATATACAAATCTTCTCTGCCC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAATTAATTCTGTTTCTCCCTTCTGATATACAAATCTTCTCTGCCC  238

seq1  CATGCAGGTTTCAAACACCAGAAGGGCTTTTCTCAAGGCCCTAGAGGTGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGGTTTCAAACACCAGAAGGGCTTTTCTCAAGGCCCTAGAGGTGA  288

seq1  TTCGATGAAGTGCACTCAGTAAGGAAGTTGATCCATGTAATACAAGTTCC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGATGAAGTGCACTCAGTAAGGAAGTTGATCCATGTAATACAAGTTCC  338

seq1  AGTAAGAGGGGAGGGTCTTAACTGTAATCAGCTAAACACTACTCAGCAGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGAGGGGAGGGTCTTAACTGTAATCAGCTAAACACTACTCAGCAGA  388

seq1  GAGAAAGCTTGACTCCATTGAAAACATGCCTCTACAGCTGTCCATTGGCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGCTTGACTCCATTGAAAACATGCCTCTACAGCTGTCCATTGGCT  438

seq1  TCCAGTATATTATGACTCTATTGAACTCATCTCATGCAGTGCTAATGATT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTATATTATGACTCTATTGAACTCATCTCATGCAGTGCTAATGATT  488

seq1  TAATTTGCACTGTGAAGTTTTCCTTTGATAGCCCTCTGAAAGTTATATTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGCACTGTGAAGTTTTCCTTTGATAGCCCTCTGAAAGTTATATTG  538

seq1  CCTTAGATGTTTTAAAGGACTGAAAAAAATTATCAGGTTAAGGCTGACAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGATGTTTTAAAGGACTGAAAAAAATTATCAGGTTAAGGCTGACAA  588

seq1  TCCAGGTTGGGGAGAAGGCTTGATAGACAAAATGCTTGATGTGCAAGCAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTTGGGGAGAAGGCTTGATAGACAAAATGCTTGATGTGCAAGCAT  638

seq1  GAGAATTGTTCTAGTTTCTTTTCTGTCCCTAACAAAACACTCTAACCAAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTGTTCTAGTTTCTTTTCTGTCCCTAACAAAACACTCTAACCAAA  688

seq1  GCAACCTGTAGAAGAAAGGGTTTATTTGACTTACACTTCAAGGTCACAAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCTGTAGAAGAAAGGGTTTATTTGACTTACACTTCAAGGTCACAAT  738

seq1  CCATCACTGAGGAATATCACGCCAGGAACTCAAAGTAGGGATAAAGATCC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCACTGAGGAATATCACGCCAGGAACTCAAAGTAGGGATAAAGATCC  788

seq1  ATAGAGGTATGCTGTCTGTTGGTCCAAATAAATACTTGCTCCCAGGCTTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGGTATGCTGTCTGTTGGTCCAAATAAATACTTGCTCCCAGGCTTC  838

seq1  TACTTAACTGGCTTTCTTACAATTCAGGACCACGTGCATAGGGAACATGC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAACTGGCTTTCTTACAATTCAGGACCACGTGCATAGGGAACATGC  888

seq1  CACTAATAGTGGGATGGTTCTCCCATATCAATTAACAATCAAGTCAATGT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAATAGTGGGATGGTTCTCCCATATCAATTAACAATCAAGTCAATGT  938

seq1  CAACACAGGCATGGGGAAGCCAAAGTTATCTTGCCAGTATCAGTTACTCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACAGGCATGGGGAAGCCAAAGTTATCTTGCCAGTATCAGTTACTCA  988

seq1  GCTGAGTCTAGGGTGTGATGAGTTGACAACTATGGTAACTAGGTCAAAGG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTCTAGGGTGTGATGAGTTGACAACTATGGTAACTAGGTCAAAGG  1038

seq1  CTTAAGTCTAGATCCCCAGAACATACACAAAAGTCTATTATGTCCATTTG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGTCTAGATCCCCAGAACATACACAAAAGTCTATTATGTCCATTTG  1088

seq1  TACCCTGCCCCAAGAGATGAGGTGGAGAATGATGGAAGAATTC  1139
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTGCCCCAAGAGATGAGGTGGAGAATGATGGAAGAATTC  1131


| Home | SequenceCutter | Blast | Download |