BAC Information

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BAC

Clone NameB6Ng01-141G14
Chromosome14 (Build37)
Map Location 8,001,421 - 8,133,140
singlet/doubletdoublet
Overlap geneLOC100041791, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235
Upstream geneLOC100041540, LOC100041840, EG666844, LOC666851, LOC100041569, LOC100041970, LOC100042000, EG666874, B930046C15Rik, LOC100041600, LOC100041958, LOC100041964, LOC546590, LOC666906, LOC100042024, LOC100041664, LOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043, EG666918, LOC100041700, LOC100042054, LOC100042100, EG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100042164
Downstream geneEG545013, EG666947, LOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272, LOC100041874, LOC100042304, LOC100041881, LOC100042312, LOC100041893, ENSMUSG00000058570, EG666976, Flnb, Dnase1l3, Abhd6, Rpp14, Pxk, Pdhb, Kctd6, Acox2, BC055107
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141G14.bB6Ng01-141G14.g
ACCDH939877DH939878
length1,1151,128
definitionDH939877|Mus musculus domesticus DNA, BAC clone: B6Ng01-141G14, 5' end.DH939878|Mus musculus domesticus DNA, BAC clone: B6Ng01-141G14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,001,421 - 8,002,525)(8,132,011 - 8,133,140)
sequence
gaattcaccacagaactcaaatatttcctcaagttgaacacataatgcaa
gtgcattgttgcttgaagtatggtttccagtcctaagcattggcattgtc
agcagagtgtaaggcaggcaattcctcaggtcctagcacatacccttatg
accagaatatagagagagtcgcacatacacacacacacatgcatgcacac
agaatcagggtgtgtttgcagggagaatgagaaagtacaattgaaataga
atccagaggaaatgcagaggacattctgtttataaggcccaaaatctgag
aagagtattaatgagcccaagaccttccatcatgtatcaggatggaccaa
atgggaccaagctttcctggtgatatagcaagcttcagcaagcaacacct
gccagacaattacaaagctttgcaaacaaacaaacaaagaactcaagcaa
gcaaacaatcaaacaaaacctcacagcaactaatatctcactcaaaccgt
cacatgtcagtgcctctattaacacatgctgagacatcacatcctcttca
atccctgagtggtaggatttcagtttcatataaaagaaattgaatagcct
atatccgcagctcactcctgctctgacttcaagttcagcctgtgagaatg
tttagggagaaaaggttgggcacagtgacaccctggagttacagtctccc
agtaccataaaatttaataagaataaatttgtaggccataccatagaccc
aagaaattgaccatgatgtttgacagaatgaaaaataccctcttgtgcaa
agctttctcactgatgaagatcaaggtgatcttgtagctcatttttccca
ctggtcatcggctgactgattagactttccacttttctcacccatttctg
aacaggagtgttgggggatggatggtggtacaccagcagccccctatggg
taggatgaacacatgatgaatatgcattactgttcaggcactaagcattg
accgaacactgaacctaatacagacttctgacaaatcagaaatgcatgtg
aatcagtcagacttctttttgcttcattatcaatggattcatggtgacca
aggacggaatcctca
gaattctccagctttggaaggagaggttgccaaaggggatcccacgggtc
catgagaggctccaggagaggcaccccagaaaaggaccaagcagggcaga
actagttaacaggtaggtcatggcagttgctagtgacatcatcagtaatg
ccttccttggagaatctcttgtatctaggatagaactagaatcttctgtg
ttgtcaactgtgttgtggtgacagcaactgcctgtggttcatcccttctg
tttgctccgggttcaccagcaggaatgttttcctggctgctcaggctatt
tcagaaagagaatggcgatgaaggagagaccagaccaaaaatgaaggaag
agggaatcctttctcatgaaaaaggaagaaggaaatggttatggagaagg
cacagtgagtcctgggcagagttggggaacttcctggtagaggtaggctt
gagctgggccttccaggattaggtcttacaagctgaagccttggactttg
tcaatgtcagaaaaagagtcaagaatttctgatgattagtatgacagagc
caggaattgacaaacctgcagctacttttctgggagctatttaatttcat
tttgagtggcaaaaaatgtcaggagtgggcactatgagaataacagtgtg
tccttttcatggaagggagttgaagcacttcatcttccagattactgtag
gtaacttgagtctctgatgaaaagaacagagaaaggatgctcccctggtc
atgtcatgtggtgaggactcagacactttggaatttgaagacacacgatt
aattagagcttgataggctaagcactatgaacttcagatatccctgcgtc
ccatctgattgacctgacaatgttcccaatatctttatgtctgaggtagc
ttatacaatttcatgcacccgggtctggtatcaggagtgtggcatattgt
ctgacatagtggttaggaagagaaactacctttacaaaccccctggagaa
agcttttcggcccatttagaaatcactgtcttatcattcttcctcctcct
acttttcttgggactcagaaatggtctccctctgtccctgggctataagt
aggtaaattcttttttgtttttacctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_8001421_8002525
seq2: B6Ng01-141G14.b_45_1159

seq1  GAATTCACCACAGAACTCAAATATTTCATCAAGTTGAACACATAATGCAA  50
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GAATTCACCACAGAACTCAAATATTTCCTCAAGTTGAACACATAATGCAA  50

seq1  GTGCATTGTTGCTTGAAGTATGGTTTCCAGTCCTAAGCATTGGCATTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATTGTTGCTTGAAGTATGGTTTCCAGTCCTAAGCATTGGCATTGTC  100

seq1  AGCAGAGTGTAAGGCAGGCAATTCCTCAGGTCCTAGCACATACCCTTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGTGTAAGGCAGGCAATTCCTCAGGTCCTAGCACATACCCTTATG  150

seq1  ACCAGAATATAGAGAGAGTCGCACATACACACACACACATGCATGCACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAATATAGAGAGAGTCGCACATACACACACACACATGCATGCACAC  200

seq1  AGAATCAGGGTGTGTTTGCAGGGAGAATGAGAAAGTACAATTGAAATAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCAGGGTGTGTTTGCAGGGAGAATGAGAAAGTACAATTGAAATAGA  250

seq1  ATCCAGAGGAAATGCAGAGGACATTCTGTTTATAAGGCCCAAAATCTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGAGGAAATGCAGAGGACATTCTGTTTATAAGGCCCAAAATCTGAG  300

seq1  AAGAGTATTAATGAGCCCAAGACCTTCCATCATGTATCAGGATGGACCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTATTAATGAGCCCAAGACCTTCCATCATGTATCAGGATGGACCAA  350

seq1  ATGGGACCAAGCTTTCCTGGTGATATAGCAAGCTTCAGCAAGCAACACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGACCAAGCTTTCCTGGTGATATAGCAAGCTTCAGCAAGCAACACCT  400

seq1  GCCAGACAATTACAAAGCTTTGCAAACAAACAAACAAAGAACTCAAGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGACAATTACAAAGCTTTGCAAACAAACAAACAAAGAACTCAAGCAA  450

seq1  GCAAACAATCAAACAAAACCTCACAGCAACTAATATCTCACTCAAACCGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACAATCAAACAAAACCTCACAGCAACTAATATCTCACTCAAACCGT  500

seq1  CACATGTCAGTGCCTCTATTAACACATGCTGAGACATCACATCCTCTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTCAGTGCCTCTATTAACACATGCTGAGACATCACATCCTCTTCA  550

seq1  ATCCCTGAGTGGTAGGATTTCAGTTTCATATAAAAGAAATTGAATAGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTGAGTGGTAGGATTTCAGTTTCATATAAAAGAAATTGAATAGCCT  600

seq1  ATATCCGCAGCTCACTCCTGCTCTGACTTCAAGTTCAGCCTGTGAGAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCGCAGCTCACTCCTGCTCTGACTTCAAGTTCAGCCTGTGAGAATG  650

seq1  TTTAGGGAGAAAAGGTTGGGCACAGTGACACCCTGGAGTTACAGTCTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGGAGAAAAGGTTGGGCACAGTGACACCCTGGAGTTACAGTCTCCC  700

seq1  AGTACCATAAAATTTAATAAGAATAAA-TTGTAGGCCATACCATAGACCC  749
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AGTACCATAAAATTTAATAAGAATAAATTTGTAGGCCATACCATAGACCC  750

seq1  AAGAAATTGACCATGATGTTTGACAGAATGAAAAATA-CCTCTTGTGCAA  798
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAGAAATTGACCATGATGTTTGACAGAATGAAAAATACCCTCTTGTGCAA  800

seq1  AGCTTTCTCACTGATGAAGATC-AGGTGATCTTGTAGCTCATTTTTCCCA  847
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGCTTTCTCACTGATGAAGATCAAGGTGATCTTGTAGCTCATTTTTCCCA  850

seq1  CTGGTCATCGGCTGACTGATTAGACTTTCCACTTTCCTCACCCATCTTCT  897
      ||||||||||||||||||||||||||||||||||| ||||||||| ||||
seq2  CTGGTCATCGGCTGACTGATTAGACTTTCCACTTTTCTCACCCAT-TTCT  899

seq1  GAACAGGAGTGTT-GGGGAT-GATGGTGGTACACCAGCAG-CCCCTATGG  944
      ||||||||||||| |||||| ||||||||||||||||||| |||||||||
seq2  GAACAGGAGTGTTGGGGGATGGATGGTGGTACACCAGCAGCCCCCTATGG  949

seq1  GTA-GATGAACACAAG-TGAATATGCA-TACTGTCAAGGCACAGAGCATT  991
      ||| |||||||||| | |||||||||| ||||||  ||||||  ||||||
seq2  GTAGGATGAACACATGATGAATATGCATTACTGTTCAGGCACTAAGCATT  999

seq1  GACAGAACACTGAGACCT-ATACAGACATCTGACAAAACAGGAATGCATG  1040
      ||| ||||||||| |||| |||||||| ||||||||| ||| ||||||||
seq2  GACCGAACACTGA-ACCTAATACAGACTTCTGACAAATCAGAAATGCATG  1048

seq1  TGACCCAGTCAGACCTC-TTTTGCTTCATTAGCACATGCA-TCAT-GTGA  1087
      |||  ||||||||| || ||||||||||||| || ||| | |||| ||||
seq2  TGAATCAGTCAGACTTCTTTTTGCTTCATTATCA-ATGGATTCATGGTGA  1097

seq1  CCAAGGACAGGATCCTCA  1105
      |||||||| | |||||||
seq2  CCAAGGACGGAATCCTCA  1115

seq1: chr14_8132011_8133140
seq2: B6Ng01-141G14.g_67_1194 (reverse)

seq1  ATAGGT--AAACACAAAAGAATTTGCATACTTGATGGCCCAGGGGCAG-G  47
      ||||||  ||||| |||||||||| | ||||| || |||||||| ||| |
seq2  ATAGGTAAAAACAAAAAAGAATTTACCTACTT-ATAGCCCAGGGACAGAG  49

seq1  GGAGACCA-TTCTGAGTCCCAAGAAGAAGATGGAGGGAGAGAAAAGATAA  96
      |||||||| |||||||||||||||| |||  |||||  ||  || ||| |
seq2  GGAGACCATTTCTGAGTCCCAAGAA-AAGTAGGAGGAGGAAGAATGAT-A  97

seq1  AGACAGTGAATTCCTAAAAGAGCAGAAAAGCTATCTTCCAGCTGGTTTGC  146
      |||||||| ||| ||||| | || |||||||| || |||||  |||||| 
seq2  AGACAGTG-ATTTCTAAATGGGCCGAAAAGCTTTC-TCCAGGGGGTTTGT  145

seq1  TAAGCTATGTTCCTCTTCCTAACCACCATTGTCAGAC-ATATGCCACACT  195
       ||| || ||| |||||||||||||| | |||||||| ||||||||||||
seq2  AAAGGTA-GTTTCTCTTCCTAACCACTA-TGTCAGACAATATGCCACACT  193

seq1  CCCTGTTA-CAGGCCCGGTTGCCTTGAAATGTATAAGCTGCCTCAGACAT  244
       |||| || ||| ||||| ||| |  || |||||||||| ||||||||||
seq2  -CCTGATACCAGACCCGGGTGCATGAAATTGTATAAGCTACCTCAGACAT  242

seq1  AAAGATATGGGGAACATTGTCAGGTCATATCAGATGGGACGCAGGGATAT  294
      |||||||| |||||||||||||||||| ||||||||||||||||||||||
seq2  AAAGATATTGGGAACATTGTCAGGTCA-ATCAGATGGGACGCAGGGATAT  291

seq1  CCTGAAGTTCATAGTGCTTAGCACTATCAAGCTCTAATTAATCGTGTGTC  344
       ||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  -CTGAAGTTCATAGTGCTTAGC-CTATCAAGCTCTAATTAATCGTGTGTC  339

seq1  TTCAAA-TCCAAAGTGTCTGAGTCCTCACCACATGACATGACCAGGGGAG  393
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATTCCAAAGTGTCTGAGTCCTCACCACATGACATGACCAGGGGAG  389

seq1  CATCC-TTCTCTGTTCTTTTCATCAGAGACTCAAGTTACCTACAGTAATC  442
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTTCTCTGTTCTTTTCATCAGAGACTCAAGTTACCTACAGTAATC  439

seq1  TGGAAGATGAAGTGCTTCAACTCCCTTCCATG-AAAGGACACACTGTTAT  491
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGGAAGATGAAGTGCTTCAACTCCCTTCCATGAAAAGGACACACTGTTAT  489

seq1  TCTCATAGTGCCCACTCCTGACATTTTTTGCCACTCAAAATGAAATTAAA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATAGTGCCCACTCCTGACATTTTTTGCCACTCAAAATGAAATTAAA  539

seq1  TAGCTCCCAGAAAAGTAGCTGCAGGTTTGTCAATTCCTGGCTCTGTCATA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCCCAGAAAAGTAGCTGCAGGTTTGTCAATTCCTGGCTCTGTCATA  589

seq1  CTAATCATCAGAAATTCTTGACTCTTTTTCTGACATTGACAAAGTCCAAG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCATCAGAAATTCTTGACTCTTTTTCTGACATTGACAAAGTCCAAG  639

seq1  GCTTCAGCTTGTAAGACCTAATCCTGGAAGGCCCAGCTCAAGCCTACCTC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAGCTTGTAAGACCTAATCCTGGAAGGCCCAGCTCAAGCCTACCTC  689

seq1  TACCAGGAAGTTCCCCAACTCTGCCCAGGACTCACTGTGCCTTCTCCATA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGGAAGTTCCCCAACTCTGCCCAGGACTCACTGTGCCTTCTCCATA  739

seq1  ACCATTTCCTTCTTCCTTTTTCATGAGAAAGGATTCCCTCTTCCTTCATT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTCCTTCTTCCTTTTTCATGAGAAAGGATTCCCTCTTCCTTCATT  789

seq1  TTTGGTCTGGTCTCTCCTTCATCGCCATTCTCTTTCTGAAATAGCCTGAG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTCTGGTCTCTCCTTCATCGCCATTCTCTTTCTGAAATAGCCTGAG  839

seq1  CAGCCAGGAAAACATTCCTGCTGGTGAACCCGGAGCAAACAGAAGGGATG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGGAAAACATTCCTGCTGGTGAACCCGGAGCAAACAGAAGGGATG  889

seq1  AACCACAGGCAGTTGCTGTCACCACAACACAGTTGACAACACAGAAGATT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACAGGCAGTTGCTGTCACCACAACACAGTTGACAACACAGAAGATT  939

seq1  CTAGTTCTATCCTAGATACAAGAGATTCTCCAAGGAAGGCATTACTGATG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTCTATCCTAGATACAAGAGATTCTCCAAGGAAGGCATTACTGATG  989

seq1  ATGTCACTAGCAACTGCCATGACCTACCTGTTAACTAGTTCTGCCCTGCT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACTAGCAACTGCCATGACCTACCTGTTAACTAGTTCTGCCCTGCT  1039

seq1  TGGTCCTTTTCTGGGGTGCCTCTCCTGGAGCCTCTCATGGACCCGTGGGA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCTTTTCTGGGGTGCCTCTCCTGGAGCCTCTCATGGACCCGTGGGA  1089

seq1  TCCCCTTTGGCAACCTCTCCTTCCAAAGCTGGAGAATTC  1130
      |||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTTGGCAACCTCTCCTTCCAAAGCTGGAGAATTC  1128