BAC Information

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BAC

Clone NameB6Ng01-141H06
Chromosome14 (Build37)
Map Location 124,151,814 - 124,152,929
singlet/doubletsinglet
Overlap geneItgbl1
Upstream genePcca, BC006662, 4930594M22Rik, Tmtc4, Vgcnl1, LOC668700
Downstream geneFgf14, GA_x5J8B7W4W3R-189177-188236
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141H06.bB6Ng01-141H06.g
ACCDH939908DH939909
length1,1041,166
definitionDH939908|Mus musculus domesticus DNA, BAC clone: B6Ng01-141H06, 5' end.DH939909|Mus musculus domesticus DNA, BAC clone: B6Ng01-141H06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgttttaaattgggttttcatatggtgttttcctgcaggcttcc
tccatttcaaatcctcttctagcccagtgttgctttctgttcatgagaca
gtagtgattgagaagcactccagtcctttgttttaatttgccatatttga
tggaaacatggatttaaaaatcatcatactgcgcagttgtgttttgtact
cagatagcatttgttcatccatagacacctgggaacagacctagtcacct
gtccctgtgattcactgggatttttatgtgaaaaaaggaaataaaaaaca
tttcacttatcctcaaaggaaataaaaaacatttcacttatcaactaagt
acttttaaagacaatgcctcatgttgagttaaaaacatgcacagcagcat
aaatgattaaaaaacaataatactgctagtaatatgatatatactacatc
acaagttgccttttatttttatgcttcttatctggggatgaagttatagc
taattttatagaataccagagttgggttcccagagtaaacatgcatactc
ataaccctttgtaactacagatctgacacctttttctggcctctgtgcat
acacacagacacacacacacataattaaaaaaaataaattaaaaaaaaga
cgtttttaagatcaaactggttttagagtaggtagatttcatttggagaa
atattcggtgattttcatactattttaaagcttatataacctaggattaa
cactctaaaatattttcattgatatttcctaactatttcatgctgagtga
catatgatctcaaggtttctgggtcaactttgaaattcagatgtttagac
attgttccaattgtatgtgtttgccatttagagaggagatgtgctactac
ccacattatgtgaaattgaattggcagaaaatgtgcttgggctcaaaata
atctcttaaggtttatttgcaaaggctttcatggccaatattcttttcag
cagagttatatgtgcttcttggtctcctaggagaaatgtgattttctctc
actcatccaggttgagaagactactttagattagcaactacacttgccct
tctt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacaatcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactgataagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggagctcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggaattacagagacaaagcttggagctgagatga
aaggagggaccatgtagagactgccatatccagggatccaccccataatc
agcacccaaacgctgacaccattgcatacactaacaagattttatagaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctattggatggatcacagggctccaa
tggaggagctagagaaagtagcaaaggagctaagggatctgcaacctata
gtggaacatattatgactaaccagtacccaggagctcttgactctagctg
catttgtatcaaagatgcctaagtggcatcctggaagagaggtccattgg
acgtcaacctatatgccccgttacaggaacgcgcagggcaaaacggagat
tgttgatagtatagcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_124151814_124152929
seq2: B6Ng01-141H06.b_46_1149

seq1  GAATTCTGTTTTAAATTGGGTTTTCATATGGTGTTTTCCTGCAGGCTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTTAAATTGGGTTTTCATATGGTGTTTTCCTGCAGGCTTCC  50

seq1  TCCATTTCAAATCCTCTTCTAGCCCAGTGTTGCTTTCTGTTCATGAGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTCAAATCCTCTTCTAGCCCAGTGTTGCTTTCTGTTCATGAGACA  100

seq1  GTAGTGATTGAGAAGCACTCCAGTCCTTTGTTTTAATTTGCCATATTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGATTGAGAAGCACTCCAGTCCTTTGTTTTAATTTGCCATATTTGA  150

seq1  TGGAAACATGGATTTAAAAATCATCATACTGCGCAGTTGTGTTTTGTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACATGGATTTAAAAATCATCATACTGCGCAGTTGTGTTTTGTACT  200

seq1  CAGATAGCATTTGTTCATCCATAGACACCTGGGAACAGACCTAGTCACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAGCATTTGTTCATCCATAGACACCTGGGAACAGACCTAGTCACCT  250

seq1  GTCCCTGTGATTCACTGGGATTTTTATGTGAAAAAAGGAAATAAAAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTGTGATTCACTGGGATTTTTATGTGAAAAAAGGAAATAAAAAACA  300

seq1  TTTCACTTATCCTCAAAGGAAATAAAAAACATTTCACTTATCAACTAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTTATCCTCAAAGGAAATAAAAAACATTTCACTTATCAACTAAGT  350

seq1  ACTTTTAAAGACAATGCCTCATGTTGAGTTAAAAACATGCACAGCAGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTAAAGACAATGCCTCATGTTGAGTTAAAAACATGCACAGCAGCAT  400

seq1  AAATGATTAAAAAACAATAATACTGCTAGTAATATGATATATACTACATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATTAAAAAACAATAATACTGCTAGTAATATGATATATACTACATC  450

seq1  ACAAGTTGCCTTTTATTTTTATGCTTCTTATCTGGGGATGAAGTTATAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTTGCCTTTTATTTTTATGCTTCTTATCTGGGGATGAAGTTATAGC  500

seq1  TAATTTTATAGAATACCAGAGTTGGGTTCCCAGAGTAAACATGCATACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTATAGAATACCAGAGTTGGGTTCCCAGAGTAAACATGCATACTC  550

seq1  ATAACCCTTTGTAACTACAGATCTGACACCTTTTTCTGGCCTCTGTGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCCTTTGTAACTACAGATCTGACACCTTTTTCTGGCCTCTGTGCAT  600

seq1  ACACACAGACACACACACACATAATTAAAAAAAATAAATTAAAAAAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAGACACACACACACATAATTAAAAAAAATAAATTAAAAAAAAGA  650

seq1  CGTTTTTAAGATCAAACTGGTTTTAGAGTAGGTAGATTTCATTTGGAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTTTAAGATCAAACTGGTTTTAGAGTAGGTAGATTTCATTTGGAGAA  700

seq1  ATATTCGGTGATTTTCATACTATTTTAAAGCTTATATAACCTAGGATTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCGGTGATTTTCATACTATTTTAAAGCTTATATAACCTAGGATTAA  750

seq1  CACTCTAAAATATTTTCATTGATATTTCCTAACTATTTCATGCTGAGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTAAAATATTTTCATTGATATTTCCTAACTATTTCATGCTGAGTGA  800

seq1  CATATGATCTCAAGGTTTCTGGGTCAACTTTGAAATTCAGGATGTTTAGA  850
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CATATGATCTCAAGGTTTCTGGGTCAACTTTGAAATTCA-GATGTTTAGA  849

seq1  CATTGTTCCAATTGTATGTGTTTGCCATTTAGAGAGGAGATGTGCTACTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTCCAATTGTATGTGTTTGCCATTTAGAGAGGAGATGTGCTACTA  899

seq1  CCCACATTATGTGAAATTGAATTGGCAGAAAATGTGCTTTGGCTCAAAAT  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CCCACATTATGTGAAATTGAATTGGCAGAAAATGTGCTTGGGCTCAAAAT  949

seq1  AATCTCTTAAGGTTTATTTGCAAAGGCTTCCATGGCCAATATTC-TTTCA  999
      ||||||||||||||||||||||||||||| |||||||||||||| |||||
seq2  AATCTCTTAAGGTTTATTTGCAAAGGCTTTCATGGCCAATATTCTTTTCA  999

seq1  GCAGAGGTTATATTGTGCTTCCTTGGTCACCTAGGAGAAATGTGATTTTT  1049
      ||||| |||||| ||||||| ||||||| |||||||||||||||||||| 
seq2  GCAGA-GTTATA-TGTGCTT-CTTGGTCTCCTAGGAGAAATGTGATTTT-  1045

seq1  CTTCTCACTCATTCGGGGTGTGAGAAGACTACTTTAGAATTTAGCAACCT  1099
        |||||||||| | ||   ||||||||||||||||||  ||||||| ||
seq2  -CTCTCACTCATCCAGG--TTGAGAAGACTACTTTAGA--TTAGCAA-CT  1089

seq1  ACACTTGCCCCTTTCTT  1116
      ||||||||||  |||||
seq2  ACACTTGCCC--TTCTT  1104