BAC Information

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BAC

Clone NameB6Ng01-142L13
Chromosome14 (Build37)
Map Location 116,185,153 - 116,325,470
singlet/doubletdoublet
Overlap geneGpc5
Upstream genenone
Downstream geneGpc6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142L13.bB6Ng01-142L13.g
ACCDH940845DH940846
length1,2161,123
definitionDH940845|Mus musculus domesticus DNA, BAC clone: B6Ng01-142L13, 5' end.DH940846|Mus musculus domesticus DNA, BAC clone: B6Ng01-142L13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(116,324,207 - 116,325,470)(116,185,153 - 116,186,295)
sequence
gaattcatgtgctatgtgtgtggtaaaagaaatttaggatttatcaatta
taataaagtggttttaaggttaagcagagattatcaatcctgctcatcca
tcactgcaatatgttaggagctcgataaaaatagatctgcaagcttgttt
atctgttataacccagaaagttaaaaaaaaacatttgattatgttttgat
tttttttactggtttaatggatgaacagaatttaataatattcatttttc
aacaagttaaaacattggaaaacagtaatactgataaaactatctgaaaa
ttttataaaatagtagtacttatttctcatatcctcaatgtggtttgtta
agtccacataagaaacgggccttttgatagattttattaagaatgtacag
tgattgactttctctgttttaatgctcacatgtggtttggtacatgtgtg
agcatgtgtgtacatatgtacaaagaatggagagccaagagctatgtcaa
gaattttcctgtttctctacattattgaagcagtctcttgctgaccctaa
ggcttgcttgttcgactaacctagctagccagatcctcacggaactcctg
cctcgactgcccaggtgctggaattacaggcaggtccctgtgcccactca
gctcttatgtggtgtggggatctgaactcgtctttgtgcttgcacgggaa
atgttatatccacccctctctggctctatattttctataaaaattcaaat
atgactgaaagggcttgatactgggaatagatgtgatgtaagccctctaa
gaggacagcctcattccggcatgcctgtggcagacagaattttcctttga
ggagagccctctcttcccagccccactttattatgagagcctcatcattt
gagttaaaagtcacttgtttccctttattcttctttctgatatatgtctc
tatgtgtcatgtaaatgtttacgattaacagtcagcatgtattataataa
ttgtattttaaaaataataagcagcaactttatttattgtacatgagcat
tactctccagatattgggcttaatgtattagagagaatctgctacttcca
cagactcgaaaaaaaaaaaaagcatgctgtaaataacttttatgaaatct
gtcctagtttaataattccacatactagagtgcgacttttatgggaaccg
tcacttttacacatat
gaattcttaggaaaataaagtggatatgggaaaaagttagcaaagaatgt
gagtgtctaaaaaaggaagcaagacatcatcagatcatggtttttgctat
agctgttatataagtcttctttataattggattcattgttagataattct
ttacactaatattgtgtgtttaaataacgttgtaatagctacgtaataaa
gtagatcatagtaatcagatgcattcatttttaatgatttcaccattatt
ttcaaattaattggtttttatgttttattctgaaaacgacaatggcacac
agatatcttgtaattattttagaagcaaggaagctgaattagttattcaa
ggaattcactcatacccatgttttctagcaaagtatgttaatatgaggat
tcatatatcagtatcttggatatcaacagcccaagccccttatagttatg
ctggctacttgctaagtacacagttgaataacaaacgataagggctctaa
aataaaattgcttctctttacctcttcacagttgagtttgtcatggttgg
atggatatccatgtttcaccattgtacctgtaacgaccccattcccccaa
cactaggaacaagcacagataccaacctcttagctctgtcaaagaagttt
cactgatggacatcatttgattcattagaatttgaaattattcttttaaa
tttaactctagtgacatgttctttgagaactgctaacaggcaagaagaat
atttttttttacactatcgccactgttttcatatgttttagttagaaaag
tagaaattaaaaaaaaaaagctataatgttttgaaggtgtgacctgttag
tttttattgtgaactttatgagctgccaagtccagttgcatgataaaagt
attcttaatggaaagcagcatttgttgcaacttattttcttcttcatgct
cccctcagtaggagatgctgtcatttggatgattgtactgtcagctaata
ccacttttgtgcatggataccacttcttggaactactgaaatccaattct
catatgcaagatcatatttaatgcataagtggacaacgaggatactgcct
tcatgcacatgtccttctgctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_116324207_116325470
seq2: B6Ng01-142L13.b_47_1262 (reverse)

seq1  ATATGTGTAAAAATGTACAGGTTCCCATAAAAATGTCTGCATCTTATGTA  50
      |||||||||||| || || |||||||||||||  ||| |||       | 
seq2  ATATGTGTAAAAGTG-AC-GGTTCCCATAAAA--GTC-GCA------CTC  39

seq1  TAGT-TGTGATATTTATATAAACTAGTGGACAGATTTTCTATTAGAAGTA  99
      |||| ||||  | |||| |||||||  |||||||||   |  || |||| 
seq2  TAGTATGTG-GAATTAT-TAAACTA--GGACAGATT---TCATAAAAGT-  81

seq1  TATTTAACAGCATGCTTTTTTTTTTTTTTTTTGGAGTTCTGGTGAAGTTA  149
      ||||| |||||||||    ||||||||||||| ||| ||||  |||| ||
seq2  TATTT-ACAGCATGC----TTTTTTTTTTTTTCGAG-TCTGTGGAAG-TA  124

seq1  GCAGATTTTCTCTTTAATACAATTAAGCCAAATTATTCTGGAAGAGTAAA  199
      |||||  |||||| |||||| |||||||| |||   ||||| ||||| ||
seq2  GCAGA--TTCTCTCTAATAC-ATTAAGCCCAAT--ATCTGG-AGAGT-AA  167

seq1  TGCTTCATGTACAATAATAAAAGTTTGCCTGCTTTATTATTTTTAAAATT  249
      ||| |||||||||||||  ||||||   |||| ||||||||||||||| |
seq2  TGC-TCATGTACAATAAATAAAGTT--GCTGC-TTATTATTTTTAAAA-T  212

seq1  ACCAATTTATTATAATTACATTGCTGACTTGTTAATTCGTTAAACATTTA  299
      ||  | ||||||||| |||| ||||||| |||||| ||| ||||||||||
seq2  AC--AATTATTATAA-TACA-TGCTGAC-TGTTAA-TCG-TAAACATTTA  255

seq1  CATGAACACATAGAGACAATATAATCAGAAAGAAGAAATAAAGGGAAACA  349
      |||| |||||||||||| |||| |||||||||||| ||||||||||||||
seq2  CATG-ACACATAGAGAC-ATAT-ATCAGAAAGAAG-AATAAAGGGAAACA  301

seq1  AGTGACTTTTTAACTCAAATGATGAGGCTTCTCATAATAAAGTGGGGCTG  399
      |||||| ||||||||||||||||||||| |||||||||||||||||||||
seq2  AGTGAC-TTTTAACTCAAATGATGAGGC-TCTCATAATAAAGTGGGGCTG  349

seq1  GGAAGAGAGGGCTCTCCTCAAAGGAAAATTCTGTCTGCCACAGGCATGCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGAGGGCTCTCCTCAAAGGAAAATTCTGTCTGCCACAGGCATGCC  399

seq1  GGAATGAGGCTGTCCTCTTAGAGGGCTTACATCACATCTATT-CCAGTAT  498
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GGAATGAGGCTGTCCTCTTAGAGGGCTTACATCACATCTATTCCCAGTAT  449

seq1  CAAGCCC-TTCAGTCATATTTGAATTTTTATAGAAAATATAGAGCCAGAG  547
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCCTTTCAGTCATATTTGAATTTTTATAGAAAATATAGAGCCAGAG  499

seq1  AGGGGTGGATATAACATTTCCCGTGCAAGCACAAAGACGAGTTCAGATCC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTGGATATAACATTTCCCGTGCAAGCACAAAGACGAGTTCAGATCC  549

seq1  CCACACCACATAAGAGCTGAGTGGGCACAGGGACCTGCCTGTAATTCCAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCACATAAGAGCTGAGTGGGCACAGGGACCTGCCTGTAATTCCAG  599

seq1  CACCTGGGCAGTCGAGGCAGGAGTTCCGTGAGGATCTGGCTAGCTAGGTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGGGCAGTCGAGGCAGGAGTTCCGTGAGGATCTGGCTAGCTAGGTT  649

seq1  AGTCGAACAAGCAAGCCTTAGGGTCAGCAAGAGACTGCTTCAATAATGTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGAACAAGCAAGCCTTAGGGTCAGCAAGAGACTGCTTCAATAATGTA  699

seq1  GAGAAACAGGAAAATTCTTGACATAGCTCTTGGCTCTCCATTCTTTGTAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACAGGAAAATTCTTGACATAGCTCTTGGCTCTCCATTCTTTGTAC  749

seq1  ATATGTACACACATGCTCACACATGTACCAAACCACATGTGAGCATTAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTACACACATGCTCACACATGTACCAAACCACATGTGAGCATTAAA  799

seq1  ACAGAGAAAGTCAATCACTGTACATTCTTAATAAAATCTATCAAAAGGCC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAAAGTCAATCACTGTACATTCTTAATAAAATCTATCAAAAGGCC  849

seq1  CGTTTCTTATGTGGACTTAACAAACCACATTGAGGATATGAGAAATAAGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTCTTATGTGGACTTAACAAACCACATTGAGGATATGAGAAATAAGT  899

seq1  ACTACTATTTTATAAAATTTTCAGATAGTTTTATCAGTATTACTGTTTTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTATTTTATAAAATTTTCAGATAGTTTTATCAGTATTACTGTTTTC  949

seq1  CAATGTTTTAACTTGTTGAAAAATGAATATTATTAAATTCTGTTCATCCA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTTTTAACTTGTTGAAAAATGAATATTATTAAATTCTGTTCATCCA  999

seq1  TTAAACCAGTAAAAAAAATCAAAACATAATCAAATGTTTTTTTTTAACTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACCAGTAAAAAAAATCAAAACATAATCAAATGTTTTTTTTTAACTT  1049

seq1  TCTGGGTTATAACAGATAAACAAGCTTGCAGATCTATTTTTATCGAGCTC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTTATAACAGATAAACAAGCTTGCAGATCTATTTTTATCGAGCTC  1099

seq1  CTAACATATTGCAGTGATGGATGAGCAGGATTGATAATCTCTGCTTAACC  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATATTGCAGTGATGGATGAGCAGGATTGATAATCTCTGCTTAACC  1149

seq1  TTAAAACCACTTTATTATAATTGATAAATCCTAAATTTCTTTTACCACAC  1247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACCACTTTATTATAATTGATAAATCCTAAATTTCTTTTACCACAC  1199

seq1  ACATAGCACATGAATTC  1264
      |||||||||||||||||
seq2  ACATAGCACATGAATTC  1216

seq1: chr14_116185153_116186295
seq2: B6Ng01-142L13.g_70_1192

seq1  GAATTCTTAGGAAAATAAAGTGGATATGGGAAAAAGTTAGCAAAGAATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGGAAAATAAAGTGGATATGGGAAAAAGTTAGCAAAGAATGT  50

seq1  GAGTGTCTAAAAAAGGAAGCAAGACATCATCAGATCATGGTTTTTGCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTCTAAAAAAGGAAGCAAGACATCATCAGATCATGGTTTTTGCTAT  100

seq1  AGCTGTTATATAAGTCTTCTTTATAATTGGATTCATTGTTAGATAATTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTATATAAGTCTTCTTTATAATTGGATTCATTGTTAGATAATTCT  150

seq1  TTACACTAATATTGTGTGTTTAAATAACGTTGTAATAGCTACGTAATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACTAATATTGTGTGTTTAAATAACGTTGTAATAGCTACGTAATAAA  200

seq1  GTAGATCATAGTAATCAGATGCATTCATTTTTAATGATTTCACCATTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATCATAGTAATCAGATGCATTCATTTTTAATGATTTCACCATTATT  250

seq1  TTCAAATTAATTGGTTTTTATGTTTTATTCTGAAAACGACAATGGCACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATTAATTGGTTTTTATGTTTTATTCTGAAAACGACAATGGCACAC  300

seq1  AGATATCTTGTAATTATTTTAGAAGCAAGGAAGCTGAATTAGTTATTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATCTTGTAATTATTTTAGAAGCAAGGAAGCTGAATTAGTTATTCAA  350

seq1  GGAATTCACTCATACCCATGTTTTCTAGCAAAGTATGTTAATATGAGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCACTCATACCCATGTTTTCTAGCAAAGTATGTTAATATGAGGAT  400

seq1  TCATATATCAGTATCTTGGATATCAACAGCCCAAGCCCCTTATAGTTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATATCAGTATCTTGGATATCAACAGCCCAAGCCCCTTATAGTTATG  450

seq1  CTGGCTACTTGCTAAGTACACAGTTGAATAACAAACGATAAGGGCTCTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTACTTGCTAAGTACACAGTTGAATAACAAACGATAAGGGCTCTAA  500

seq1  AATAAAATTGCTTCTCTTTACCTCTTCACAGTTGAGTTTGTCATGGTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATTGCTTCTCTTTACCTCTTCACAGTTGAGTTTGTCATGGTTGG  550

seq1  ATGGATATCCATGTTTCACCATTGTACCTGTAACGACCCCATTCCCCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATATCCATGTTTCACCATTGTACCTGTAACGACCCCATTCCCCCAA  600

seq1  CACTAGGAACAAGCACAGATACCAACCTCTTAGCTCTGTCAAAGAAGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGGAACAAGCACAGATACCAACCTCTTAGCTCTGTCAAAGAAGTTT  650

seq1  CACTGATGGACATCATTTGATTCATTAGAATTTGAAATTATTCTTTTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGATGGACATCATTTGATTCATTAGAATTTGAAATTATTCTTTTAAA  700

seq1  TTTAACTCTAGTGACATGTTCTTTGAGAACTGCTAACAGGCAAGAAGAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTCTAGTGACATGTTCTTTGAGAACTGCTAACAGGCAAGAAGAAT  750

seq1  ATTTTTTTTTACACTATCGCCACTGTTTTCATATGTTTTAGTTAGAAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTTACACTATCGCCACTGTTTTCATATGTTTTAGTTAGAAAAG  800

seq1  TAGAAATTAAAAAAAAAAAAGCTATAATGTTTTGAAGGTGTGACCTGTTA  850
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATT-AAAAAAAAAAAGCTATAATGTTTTGAAGGTGTGACCTGTTA  849

seq1  GTTTTTAATTGTGAACTTTATGAGCTGCCAAGTCCAGTTGCATGATAAAA  900
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTT-ATTGTGAACTTTATGAGCTGCCAAGTCCAGTTGCATGATAAAA  898

seq1  GTATTCTTAATGGAAAGCAGCATTTGTTGCAACTTATTTTCTTCTTCATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTTAATGGAAAGCAGCATTTGTTGCAACTTATTTTCTTCTTCATG  948

seq1  CT-CCCTCAGTAGGAGATGCTGTCATTTGGATGATTGTAACTGTCAGCTT  999
      || ||||||||||||||||||||||||||||||||||| ||||||||| |
seq2  CTCCCCTCAGTAGGAGATGCTGTCATTTGGATGATTGT-ACTGTCAGC-T  996

seq1  AATACCACTTTTTGTGCATTGATACCACTTCTTGGGAAACTACTGAAATC  1049
      |||||||| |||||||||| |||||||||||||||  |||||||||||||
seq2  AATACCAC-TTTTGTGCATGGATACCACTTCTTGG--AACTACTGAAATC  1043

seq1  CCATTCCTCATATGCAAAGAATCATAATTTAAATGCCCATTAAGTGGACA  1099
      | ||| |||||||||||   ||||||  || |||||    ||||||||||
seq2  CAATT-CTCATATGCAA--GATCATA--TTTAATGC---ATAAGTGGACA  1085

seq1  ACAGAGGGATACTGCCTTCATGGCATCTATGTTCTTTCTGCTTA  1143
      || || ||||||||||||||| |||   ||| || |||||||||
seq2  AC-GA-GGATACTGCCTTCAT-GCA--CATG-TCCTTCTGCTTA  1123