BAC Information

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BAC

Clone NameB6Ng01-142M03
Chromosome14 (Build37)
Map Location 14,873,435 - 15,056,528
singlet/doubletdoublet
Overlap geneAtxn7, Psmd6, Olfr720, LOC667125
Upstream geneEG328354, Synpr, A430083B19Rik, EG382844, LOC100042045, Gm281, Thoc7
Downstream geneLOC100042543, Olfr31, Il3ra, LOC627139, Olfr721-ps1, LOC667152, LOC100042147, Slc4a7, Nek10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142M03.bB6Ng01-142M03.g
ACCDH940873DH940874
length1,067925
definitionDH940873|Mus musculus domesticus DNA, BAC clone: B6Ng01-142M03, 5' end.DH940874|Mus musculus domesticus DNA, BAC clone: B6Ng01-142M03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,055,456 - 15,056,528)(14,873,435 - 14,874,201)
sequence
gaattcatgaaattcttaggcaaaccttcatagaagcaggtggagagagg
atgtgatagggtgtttctgggagggaggaaaaccgggaaaggaaataaca
tttgaattgtaaataaataaaatatttgataaaaataaacctgagagcct
gagaaagtcaaaattcaagatggtctccctctttctccctttcattgtgg
ttttgatacagggtttctgtgtgtagtcctggctgacctttaacttactc
catataccaggctgtccttgggagcttcaggtaaaagcatgtaacaccaa
tgcctactccctggttttaagatatcatatatatcttaaagatttgtggt
ggttcattgtaataagggactgtagcttgtttattgtagatagggagatt
ggattttaagttatttgtggtctccttagtttaaaagagattattttgtc
attccttccttacttccatccttctttcctttcttttttcctcctttctt
aattccattcttcactccttttgctctgttaatttctttatttctttcgt
tattgattgttgttagtttttgagactatggctcatgttggcctaaatct
cataatagtactatggctaggccttctgattatagattataattgttata
agtattatagcttctgattatagaattatagatatggtccaaaatgcctc
ataaggtttttctctttcaatcattaactggctttggttttaatagtatt
gttcatgtctccatgctttcattttttaaaattgatttttctggttatca
tccctacttctgtctaatttgtaatagaagttatttaatactttctcaat
cctcttcaaaagttacagccagatatatatagagaaatctaaagcctgcc
acagatgggagcaagacaggaggaggcacatgatggtaatcaaggcttaa
atgcagactcaggataaaagaagcagatcattgaataaatgattgggggg
atgacaaggtaataacagtgtcatgccagcttggctcctgtgtgtggggc
ctgggttgtgggaaaaa
gaattcactctgtagaccaggctggccttgaactcagaaatccacctgcc
tctgcctcccatgtggtaggattaaaggcgtgtgccaccaccacccgact
gaattttgttcttttttaaagataactgatatcttctatggtagctctgt
agatgaggctagctttgatctcacagagagagctcttgctgtctctgctt
ttggaatgatgggtttaaaagcatgtgccatcactgctcagccattgcac
cacattttctttgtttagtcctccatagccattgtgaatagtactgtaat
cagcatggcttcttggcattgctgttctgtcctttgagtgtacaccagca
gtgaagtagctagatcatgcagtgcaggggctgtcacctaagtgtcaaga
cctgttagagggcagacattaaacaaacttttcatgggttgtctacttca
tttggaaagcacagatattacattacaattcataacagtaagaaaattac
acttaggaagtagcaacataaataatggggctggagatatggctcaatgg
ttaagagcactgactgctcttccaaaggtcctgagttcaattcccagcaa
ccacatggtggctcacaaccatctgtaatagtatcttgatgccctcttct
ggtgtctctgaagacacctatggtgtactcacattaaataaataaataat
taaaaaaaaaaataattctatggttggggggtctccacgacatgaagaac
tatgttagtgggtcacagaattaagaaagttgagaaccactgatggagtg
gttctgtttttagatttttataatatttgtaatggcttgtactaatttag
atccccacccagtgtatagtttttgaccttcctctgtattcttgtcagca
tttttgttcttgtcattgttggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_15055456_15056528
seq2: B6Ng01-142M03.b_46_1112 (reverse)

seq1  TTTTTCCCACAAACCCATGGCCCCACACACCAAGAAGCCCAGACTGGCAT  50
      |||||||||| |||||| ||||||||||||  || |||| || |||||||
seq2  TTTTTCCCAC-AACCCA-GGCCCCACACAC--AGGAGCCAAG-CTGGCAT  45

seq1  GACACTGTTATTAACCTTGTCAT-CCCCCATTCA-TTATTCTATTGATCT  98
      |||||||||||| |||||||||| |||||| ||| |||||| | ||||||
seq2  GACACTGTTATT-ACCTTGTCATCCCCCCAATCATTTATTC-AATGATCT  93

seq1  GCTTCTTTTATCCTGAGTCTGCATTTAAGCCCTGATTTACATCATGTTGC  148
      ||||||||||||||||||||||||||||||| |||||  ||||||| |||
seq2  GCTTCTTTTATCCTGAGTCTGCATTTAAGCCTTGATTACCATCATG-TGC  142

seq1  CTCCTCCTGTCTTGCTCCCATCTGTGGCAGGCTTTAGATTTCTCTATATA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCTGTCTTGCTCCCATCTGTGGCAGGCTTTAGATTTCTCTATATA  192

seq1  TATCTGGCTGTAACTTTTGAAGAGGATTGAGAAAGTATTAAATAACTTCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGCTGTAACTTTTGAAGAGGATTGAGAAAGTATTAAATAACTTCT  242

seq1  ATTACAAATTAGACAGAAGTAGGGATGATAACCAGAAAAATCAATTTTAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAAATTAGACAGAAGTAGGGATGATAACCAGAAAAATCAATTTTAA  292

seq1  AAAATGAAAGCATGGAGACATGAACAATACTATTAAAACCAAAGCCAGTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAAAGCATGGAGACATGAACAATACTATTAAAACCAAAGCCAGTT  342

seq1  AATGATTGAAAGAGAAAAACCTTATGAGGCATTTTGGACCATATCTATAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTGAAAGAGAAAAACCTTATGAGGCATTTTGGACCATATCTATAA  392

seq1  TTCTATAATCAGAAGCTATAATACTTATAACAATTATAATCTATAATCAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATAATCAGAAGCTATAATACTTATAACAATTATAATCTATAATCAG  442

seq1  AAGGCCTAGCCATAGTACTATTATGAGATTTAGGCCAACATGAGCCATAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCTAGCCATAGTACTATTATGAGATTTAGGCCAACATGAGCCATAG  492

seq1  TCTCAAAAACTAACAACAATCAATAACGAAAGAAATAAAGAAATTAACAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAAACTAACAACAATCAATAACGAAAGAAATAAAGAAATTAACAG  542

seq1  AGCAAAAGGAGTGAAGAATGGAATTAAGAAAGGAGGAAAAAAGAAAGGAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAGGAGTGAAGAATGGAATTAAGAAAGGAGGAAAAAAGAAAGGAA  592

seq1  AGAAGGATGGAAGTAAGGAAGGAATGACAAAATAATCTCTTTTAAACTAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGATGGAAGTAAGGAAGGAATGACAAAATAATCTCTTTTAAACTAA  642

seq1  GGAGACCACAAATAACTTAAAATCCAATCTCCCTATCTACAATAAACAAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACCACAAATAACTTAAAATCCAATCTCCCTATCTACAATAAACAAG  692

seq1  CTACAGTCCCTTATTACAATGAACCACCACAAATCTTTAAGATATATATG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGTCCCTTATTACAATGAACCACCACAAATCTTTAAGATATATATG  742

seq1  ATATCTTAAAACCAGGGAGTAGGCATTGGTGTTACATGCTTTTACCTGAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTAAAACCAGGGAGTAGGCATTGGTGTTACATGCTTTTACCTGAA  792

seq1  GCTCCCAAGGACAGCCTGGTATATGGAGTAAGTTAAAGGTCAGCCAGGAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCAAGGACAGCCTGGTATATGGAGTAAGTTAAAGGTCAGCCAGGAC  842

seq1  TACACACAGAAACCCTGTATCAAAACCACAATGAAAGGGAGAAAGAGGGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACAGAAACCCTGTATCAAAACCACAATGAAAGGGAGAAAGAGGGA  892

seq1  GACCATCTTGAATTTTGACTTTCTCAGGCTCTCAGGTTTATTTTTATCAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATCTTGAATTTTGACTTTCTCAGGCTCTCAGGTTTATTTTTATCAA  942

seq1  ATATTTTATTTATTTACAATTCAAATGTTATTTCCTTTCCCGGTTTTCCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTATTTATTTACAATTCAAATGTTATTTCCTTTCCCGGTTTTCCT  992

seq1  CCCTCCCAGAAACACCCTATCACATCCTCTCTCCACCTGCTTCTATGAAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCAGAAACACCCTATCACATCCTCTCTCCACCTGCTTCTATGAAG  1042

seq1  GTTTGCCTAAGAATTTCATGAATTC  1073
      |||||||||||||||||||||||||
seq2  GTTTGCCTAAGAATTTCATGAATTC  1067

seq1: chr14_14873435_14874201
seq2: B6Ng01-142M03.g_68_834

seq1  GAATTCACTCTGTAGACCAGGCTGGCCTTGAACTCAGAAATCCACCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCAGGCTGGCCTTGAACTCAGAAATCCACCTGCC  50

seq1  TCTGCCTCCCATGTGGTAGGATTAAAGGCGTGTGCCACCACCACCCGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCATGTGGTAGGATTAAAGGCGTGTGCCACCACCACCCGACT  100

seq1  GAATTTTGTTCTTTTTTAAAGATAACTGATATCTTCTATGGTAGCTCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTGTTCTTTTTTAAAGATAACTGATATCTTCTATGGTAGCTCTGT  150

seq1  AGATGAGGCTAGCTTTGATCTCACAGAGAGAGCTCTTGCTGTCTCTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGGCTAGCTTTGATCTCACAGAGAGAGCTCTTGCTGTCTCTGCTT  200

seq1  TTGGAATGATGGGTTTAAAAGCATGTGCCATCACTGCTCAGCCATTGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAATGATGGGTTTAAAAGCATGTGCCATCACTGCTCAGCCATTGCAC  250

seq1  CACATTTTCTTTGTTTAGTCCTCCATAGCCATTGTGAATAGTACTGTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTTCTTTGTTTAGTCCTCCATAGCCATTGTGAATAGTACTGTAAT  300

seq1  CAGCATGGCTTCTTGGCATTGCTGTTCTGTCCTTTGAGTGTACACCAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGGCTTCTTGGCATTGCTGTTCTGTCCTTTGAGTGTACACCAGCA  350

seq1  GTGAAGTAGCTAGATCATGCAGTGCAGGGGCTGTCACCTAAGTGTCAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGTAGCTAGATCATGCAGTGCAGGGGCTGTCACCTAAGTGTCAAGA  400

seq1  CCTGTTAGAGGGCAGACATTAAACAAACTTTTCATGGGTTGTCTACTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTAGAGGGCAGACATTAAACAAACTTTTCATGGGTTGTCTACTTCA  450

seq1  TTTGGAAAGCACAGATATTACATTACAATTCATAACAGTAAGAAAATTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAAGCACAGATATTACATTACAATTCATAACAGTAAGAAAATTAC  500

seq1  ACTTAGGAAGTAGCAACATAAATAATGGGGCTGGAGATATGGCTCAATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGGAAGTAGCAACATAAATAATGGGGCTGGAGATATGGCTCAATGG  550

seq1  TTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAATTCCCAGCAA  600

seq1  CCACATGGTGGCTCACAACCATCTGTAATAGTATCTTGATGCCCTCTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGGTGGCTCACAACCATCTGTAATAGTATCTTGATGCCCTCTTCT  650

seq1  GGTGTCTCTGAAGACACCTATGGTGTACTCACATTAAATAAATAAATAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCTCTGAAGACACCTATGGTGTACTCACATTAAATAAATAAATAAT  700

seq1  TAAAAAAAAAAATAATTCTATGGTTGGGGGGTCTCCACGACATGAAGAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAAAAATAATTCTATGGTTGGGGGGTCTCCACGACATGAAGAAC  750

seq1  TATGTTAGTGGGTCACA  767
      |||||||||||||||||
seq2  TATGTTAGTGGGTCACA  767