BAC Information

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BAC

Clone NameB6Ng01-142O04
Chromosome14 (Build37)
Map Location 44,035,241 - 44,036,285
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666264, LOC100040787, EG666280, EG666285, LOC666298, LOC100042031, EG666318, EG546249, LOC100040863, LOC100040875, LOC100040890, LOC100042055, LOC635209, 1700091H14Rik, EG666415, LOC100040976, LOC100040983, LOC100042114, LOC666370, EG666376, LOC100041025, EG666396, LOC100041046, LOC100042130, LOC624893, LOC100041069, EG666420, LOC666436, EG638353, LOC666454, LOC100041106, EG638262, EG640992, EG666471, LOC666481, LOC100041143, EG666485, 1700049E17Rik, LOC666492, 1700001F09Rik
Downstream geneLOC673380, LOC100042326, EG666502, LOC545039, LOC100041227, LOC100041235, LOC100042342, LOC666322, EG666556, EG666561, LOC676304, Rbmxrtp, LOC673132, LOC100041300, LOC624717, LOC672977, EG666590, LOC100041327, EG623592, Ear1, Ear-ps12, Ear-ps9, Ear-ps8, Ang-ps3, Ear10, EG666451, LOC672161, Ang3, Ear-ps7, Ear-ps10, EG630952, EG666621, LOC100041356, LOC100041364, LOC100041371, LOC100041376, Ear-ps2, Ang-ps1, Ear2, LOC100041393, LOC100041422, EG666638, 4930503E14Rik, EG666647, EG624862, EG666660, EG666667, EG546250, EG666675, LOC100041494, LOC100041497
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142O04.bB6Ng01-142O04.g
ACCDH940968DH940969
length1,046123
definitionDH940968|Mus musculus domesticus DNA, BAC clone: B6Ng01-142O04, 5' end.DH940969|Mus musculus domesticus DNA, BAC clone: B6Ng01-142O04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagaacaaatttaaaaccatgtcggtgtgctgggcatggtggtg
catgcctgtaatctcagcactcaggaggcagaggcaggtggatttctgca
ttcagttcaaggtaatcctggtctacaaagtgagatccaggacagccaga
gctatacagagaaaccctgtcttaaaaaaaacaaacaaacaaagaaatgc
catgtgtagtagcataagaatactttaatctctgcacttgaaaggcagca
cttgcaggcagatatctgtgagtttgaggccaatatggtcccatgagtcc
caaaacaggcagggcttcatagagagaccctatctcaaagaataaataaa
tctaaaaataaagttctatacacacaatgaaaatgtgatttagttatgca
aggataacacaatagatgtaaatcaaataaatgtatctcagcacaaaaat
agtctcaaaaattaatagttgaattgtcatctcagtacctgcagaaaatg
cattgcacatgtccatcatcacctcatgataaaattcctgaagaaactag
gaataggagaaacatgcctcaccctaataaatcttctattcaacaaacat
agtcaacattatagtaatgggagagagaaaaagtctgtataaaataagaa
acaagaccagagtataaattctctctaccttattcaacataatacctgag
acttagaagcaatgagcaagtataaagaaacaagatagaaagagaaaata
aacatgtggatccctgcaaactctactttcattaaggaagtgctcttggt
gaggtaagaagaaaagtaaggtcagttcaaatttgtcagcaggctgggtc
aaacttctggagctgggtgcctagtgggatgaattttacaatctgaactc
agtaaaactttgggaaaatggttcctgttgacaggtactaacaagaaaac
tttaggcatgactaggtcagactctttttacagtttatgactttcaacca
agcacccatgaccttttcacccagaatgagttgtcctgacagagaa
agtcagagaaaattcacataagcctcaagagaatggaggccctagagagt
tcaaaggtttggtgggcgtgggggtggggacattctgtggacacaggggg
ttaggggtggtggtatgggatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_44035241_44036285
seq2: B6Ng01-142O04.b_43_1088

seq1  GAATTCCAGAACAAATTTAAAACCATGTCGGTGTGCTGGGCATGGTGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAACAAATTTAAAACCATGTCGGTGTGCTGGGCATGGTGGTG  50

seq1  CATGCCTGTAATCTCAGCACTCAGGAGGCAGAGGCAGGTGGATTTCTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTGTAATCTCAGCACTCAGGAGGCAGAGGCAGGTGGATTTCTGCA  100

seq1  TTCAGTTCAAGGTAATCCTGGTCTACAAAGTGAGATCCAGGACAGCCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTTCAAGGTAATCCTGGTCTACAAAGTGAGATCCAGGACAGCCAGA  150

seq1  GCTATACAGAGAAACCCTGTCTTAAAAAAAACAAACAAACAAAGAAATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATACAGAGAAACCCTGTCTTAAAAAAAACAAACAAACAAAGAAATGC  200

seq1  CATGTGTAGTAGCATAAGAATACTTTAATCTCTGCACTTGAAAGGCAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTAGTAGCATAAGAATACTTTAATCTCTGCACTTGAAAGGCAGCA  250

seq1  CTTGCAGGCAGATATCTGTGAGTTTGAGGCCAATATGGTCCCATGAGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGGCAGATATCTGTGAGTTTGAGGCCAATATGGTCCCATGAGTCC  300

seq1  CAAAACAGGCAGGGCTTCATAGAGAGACCCTATCTCAAAGAATAAATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAGGCAGGGCTTCATAGAGAGACCCTATCTCAAAGAATAAATAAA  350

seq1  TCTAAAAATAAAGTTCTATACACACAATGAAAATGTGATTTAGTTATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAAATAAAGTTCTATACACACAATGAAAATGTGATTTAGTTATGCA  400

seq1  AGGATAACACAATAGATGTAAATCAAATAAATGTATCTCAGCACAAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAACACAATAGATGTAAATCAAATAAATGTATCTCAGCACAAAAAT  450

seq1  AGTCTCAAAAATTAATAGTTGAATTGTCATCTCAGTACCTGCAGAAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCAAAAATTAATAGTTGAATTGTCATCTCAGTACCTGCAGAAAATG  500

seq1  CATTGGACATGTCCATCATCACCTCATGATAAAATTCCTGAAGAAACTAG  550
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCACATGTCCATCATCACCTCATGATAAAATTCCTGAAGAAACTAG  550

seq1  GTATAGGAGAAACATGCCTCACCCTAATAAATCTTCTATTCAACAAACAT  600
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGGAGAAACATGCCTCACCCTAATAAATCTTCTATTCAACAAACAT  600

seq1  AGTCAACATTATAGTAATGGGAGAGAGAGAAAGTCTGTATAAAATAAGAA  650
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AGTCAACATTATAGTAATGGGAGAGAGAAAAAGTCTGTATAAAATAAGAA  650

seq1  ACAAGACCAGAGTATAAATTCTCTCTACCTTATTCAACATAATACCTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGACCAGAGTATAAATTCTCTCTACCTTATTCAACATAATACCTGAG  700

seq1  ACTTAGAAGCAATGAGCAAGTATAAAGAAACAAGATAGAAAGAGAAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGAAGCAATGAGCAAGTATAAAGAAACAAGATAGAAAGAGAAAATA  750

seq1  AACATGTGGATCCCTGCAAACTCTACTTTCATTAGGGAAGTGGTCTTGGT  800
      |||||||||||||||||||||||||||||||||| ||||||| |||||||
seq2  AACATGTGGATCCCTGCAAACTCTACTTTCATTAAGGAAGTGCTCTTGGT  800

seq1  GAAGTAAGAAGAAAAGTAAGGTCAGTTCAAATTTGTCAGCAAGGCTGGTT  850
      || ||||||||||||||||||||||||||||||||||||| ||||||| |
seq2  GAGGTAAGAAGAAAAGTAAGGTCAGTTCAAATTTGTCAGC-AGGCTGGGT  849

seq1  CAAACTTCTGGAGCTTGGTGCCTAGT-GGATGAATTTTTACAAATCTGAA  899
      ||||||||||||||| |||||||||| ||||||| |||||| ||||||||
seq2  CAAACTTCTGGAGCTGGGTGCCTAGTGGGATGAA-TTTTAC-AATCTGAA  897

seq1  CTCAGTAAAACTTT-GGAAAATGGTTCCTGTTGACAGGTACT-ACAAGAA  947
      |||||||||||||| ||||||||||||||||||||||||||| |||||||
seq2  CTCAGTAAAACTTTGGGAAAATGGTTCCTGTTGACAGGTACTAACAAGAA  947

seq1  AACTTTAGGCATGACTAGGTCAGAACTCCTCTTTACAGTTTATGA---TC  994
      ||||||||||||||||||||||| ||| || ||||||||||||||   ||
seq2  AACTTTAGGCATGACTAGGTCAG-ACT-CTTTTTACAGTTTATGACTTTC  995

seq1  AACCAAGCACCCATGACCTTTTCACCCAGAATGAGTTGTCCTGACAGAGA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAGCACCCATGACCTTTTCACCCAGAATGAGTTGTCCTGACAGAGA  1045

seq1  A  1045
      |
seq2  A  1046