BAC Information

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BAC

Clone NameB6Ng01-142P13
Chromosome14 (Build37)
Map Location 108,722,134 - 108,723,284
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668752, EG668754, LOC668757
Downstream geneEG668761, Slitrk1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142P13.bB6Ng01-142P13.g
ACCDH941033DH941034
length1,1331,166
definitionDH941033|Mus musculus domesticus DNA, BAC clone: B6Ng01-142P13, 5' end.DH941034|Mus musculus domesticus DNA, BAC clone: B6Ng01-142P13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatcacactctggcaaggagcaaacatatggttgggcacatcat
tgctggtgttgttgctttcacaacacgtatagccagtgcttcttcatttc
cattagctttgtcacaataagtatgaacaggtagttttgtaaatcatctt
gaagaaaatataaccaatgccattccgtggacacacaagagaatttggat
agacagctaggacaaagaattgacacattataataacatagtgcagatca
tgggagatgaggtacaagaaataaaagttagaagccatttggaatgttat
cgatggatttgtatcgttccaaaaatgtataatgagaagcagtataattg
gaccagagtaaaatgtcacgttacaggtgtgtggcataaaactacttctt
ttgatttgttagccctgcataccgagtttataagtttaaaaaatacaaac
ctcagtggttttgatactgctagtactgaaatgctaatggtaatctgaaa
atgttacatgcctaagacaggccacaaatacaagattattcacacaccaa
tgatggttaagagctgtgttttcagatagcaagctaagacaggcacagct
ttctgctccatggttgataaagtgccttttattgatgttaaaaaaaaagt
gtgtcaacttaagacaaggcagaaatgctagtattaatgtactgatgaca
ggtccataaatcctaagaggacccctaagataggcacaaccttctgtgct
aaaagctgagacaactttggcatgtacagataaaaaaaatgcggaattaa
ctttggctgactttttgcttgtgaataatcatggatgagtctgctgacat
ctgtctttgtttttaattaagatatgaattataccctgtcaagtttctcc
acttacacatatgtccttgagagactgtctaagcttgaaggaaatgggcc
ttagtcacacatagatactgtgtagaaaaactcacactgacccagtgaaa
gactacatgcacatacatgaggctgatggtgtgaaatatcagacttggtg
ataaagacttatacaggacagataataggaaataaaggaagatctccaat
ttacacactggaatttcaggcttaatcatctta
gaattcctagagacttggaatggagaaagctctcaagagtgaatgttggg
gatccctttagctgagatgcatagcagtggggatatggaacctgaagaag
ccacctcccaaatagctaggcaggacctcccatggagggataaggatacc
aaaccacccacaaaacttttaacccagcatttgtcctgtctataagaaat
gaagcaacaaagatggaacagaggagaaatggccaaccaatcatctgtcc
aattcaagacccagctcatgggtaagaactactctctgacactattaatg
atactcagttatgctgacatacaggaccatagtataacagtcttctgaga
agctctacccagcagctcactgaaacagatgcagatacacatagccaatc
attggtcagacatccaggacacctattgaagagttgggggaatgatagga
accctacaggaagaccaacaaagtcaactaaggtggacccttgggagctc
tcagagagtgagccacaccaaccaaagatcatacacaggctggacctagc
atcccaaacatgcagcagatgtgtagcctagtctccatgtggctctccca
acaggtagactgtgggctgtccttaaaagagttgcctgactgagagagaa
atctgttcgaaaatatgtttccttgtctcgcttcagtggaagagaatgta
cttaaccctgcagggacatgatgctgagggggaaaggggtgaagcctttc
agagatagggcatgggaatggaaggaggaactctgtgtatatgtggcagg
ggaatccaggaggcacagcagagactggggatgaacatacatacataaat
acatacatacataataagtattatttatggctaactatattgatatatca
cataaatgcattccacagcatttgttatccatgatcatttgtgtttacac
ataaatacttgggtttttcttttgtcaactgcagatttttatggagttag
ttagtctgtacatagttcgttaatatacatctagtataaatttgcataaa
aagtaggttctataggcagtagtgaatgagaatgaaagtaagttcttcaa
acagattctatgcataaagactaagattccgatgtatttcaattttagat
agaattcaaggtttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_108722134_108723284
seq2: B6Ng01-142P13.b_48_1180

seq1  GAATTCAATCACACTCTGGCAAGGAGCAAACATATGGTTGGGCACATCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCACACTCTGGCAAGGAGCAAACATATGGTTGGGCACATCAT  50

seq1  TGCTGGTGTTGTTGCTTTCACAACACGTATAGCCAGTGCTTCTTCATTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTGTTGTTGCTTTCACAACACGTATAGCCAGTGCTTCTTCATTTC  100

seq1  CATTAGCTTTGTCACAATAAGTATGAACAGGTAGTTTTGTAAATCATCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGCTTTGTCACAATAAGTATGAACAGGTAGTTTTGTAAATCATCTT  150

seq1  GAAGAAAATATAACCAATGCCATTCCGTGGACACACAAGAGAATTTGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAATATAACCAATGCCATTCCGTGGACACACAAGAGAATTTGGAT  200

seq1  AGACAGCTAGGACAAAGAATTGACACATTATAATAACATAGTGCAGATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCTAGGACAAAGAATTGACACATTATAATAACATAGTGCAGATCA  250

seq1  TGGGAGATGAGGTACAAGAAATAAAAGTTAGAAGCCATTTGGAATGTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGATGAGGTACAAGAAATAAAAGTTAGAAGCCATTTGGAATGTTAT  300

seq1  CGATGGATTTGTATCGTTCCAAAAATGTATAATGAGAAGCAGTATAATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGGATTTGTATCGTTCCAAAAATGTATAATGAGAAGCAGTATAATTG  350

seq1  GACCAGAGTAAAATGTCACGTTACAGGTGTGTGGCATAAAACTACTTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGAGTAAAATGTCACGTTACAGGTGTGTGGCATAAAACTACTTCTT  400

seq1  TTGATTTGTTAGCCCTGCATACCGAGTTTATAAGTTTAAAAAATACAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTGTTAGCCCTGCATACCGAGTTTATAAGTTTAAAAAATACAAAC  450

seq1  CTCAGTGGTTTTGATACTGCTAGTACTGAAATGCTAATGGTAATCTGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGGTTTTGATACTGCTAGTACTGAAATGCTAATGGTAATCTGAAA  500

seq1  ATGTTACATGCCTAAGACAGGCCACAAATACAAGATTATTCACACACCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTACATGCCTAAGACAGGCCACAAATACAAGATTATTCACACACCAA  550

seq1  TGATGGTTAAGAGCTGTGTTTTCAGATAGCAAGCTAAGACAGGCACAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGTTAAGAGCTGTGTTTTCAGATAGCAAGCTAAGACAGGCACAGCT  600

seq1  TTCTGCTCCATGGTTGATAAAGTGCCTTTTATTGATGTTAAAAAAAAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTCCATGGTTGATAAAGTGCCTTTTATTGATGTTAAAAAAAAAGT  650

seq1  GTGTCAACTTAAGACAAGGCAGAAATGCTAGTATTAATGTACTGATGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAACTTAAGACAAGGCAGAAATGCTAGTATTAATGTACTGATGACA  700

seq1  GGTCCATAAATCCTAAGAGGACCCCTAAGATAGGCACAACCTTCTGTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCATAAATCCTAAGAGGACCCCTAAGATAGGCACAACCTTCTGTGCT  750

seq1  AAAAGCTGAGACAACTTTGGCATGTACAGATAAAAAAAATGCGGAATTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTGAGACAACTTTGGCATGTACAGATAAAAAAAATGCGGAATTAA  800

seq1  CTTTGGCTGACTTTTTGCTTGTGAATAATCATGGATGAGTCTGCTGACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGCTGACTTTTTGCTTGTGAATAATCATGGATGAGTCTGCTGACAT  850

seq1  CTGTCTTTGTTTTTAATTAAGATATGAATTATACCCTGTCAAGTTTCTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTTGTTTTTAATTAAGATATGAATTATACCCTGTCAAGTTTCTCC  900

seq1  ACTTACACATATGTCCTTGAGAGACTGTCTAAGCTTGAAGGAAAT-GGCC  949
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACTTACACATATGTCCTTGAGAGACTGTCTAAGCTTGAAGGAAATGGGCC  950

seq1  TTAGTCACACATAGATACTGTGTAGAAAAAACTCACCACTGACCCAAGTG  999
      ||||||||||||||||||||||||| ||||||||| ||||||||| ||||
seq2  TTAGTCACACATAGATACTGTGTAG-AAAAACTCA-CACTGACCC-AGTG  997

seq1  AAAGACTACATGCACAATACATGGAAGGCTGGATGGTGTGAAATATTCAG  1049
      ||||||||||||||| |||||||  ||||| |||||||||||||| ||||
seq2  AAAGACTACATGCAC-ATACATG--AGGCT-GATGGTGTGAAATA-TCAG  1042

seq1  ACTTTGGTGATTAAAAGACTTTATTACAGGAAACAGATAATAGAAATAAA  1099
      || ||||||||  ||||||||   ||||||  ||||||||||| || | |
seq2  AC-TTGGTGAT--AAAGACTT--ATACAGG--ACAGATAATAGGAA-ATA  1084

seq1  AAGAAAGAATCTCACATTTTACACACTGG-ATTTCAGGCTTTATATCATC  1148
      ||| ||| ||||| || |||||||||||| |||||||||||   ||||||
seq2  AAGGAAG-ATCTC-CAATTTACACACTGGAATTTCAGGCTT--AATCATC  1130

seq1  TTA  1151
      |||
seq2  TTA  1133