BAC Information

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BAC

Clone NameB6Ng01-143H12
Chromosome14 (Build37)
Map Location 36,720,451 - 36,720,967
singlet/doubletsinglet
Overlap genenone
Upstream geneGrid1, 4930596D02Rik, LOC100040277
Downstream geneLOC665933, 4930474N05Rik, Gcap14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143H12.bB6Ng01-143H12.g
ACCDH941395DH941396
length1,231934
definitionDH941395|Mus musculus domesticus DNA, BAC clone: B6Ng01-143H12, 5' end.DH941396|Mus musculus domesticus DNA, BAC clone: B6Ng01-143H12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaaactggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaagagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccccaaaaattccaccagagaactcctaaacc
tgataaagagcttcggtgaagtagctggatataaaataaactcaaacaat
tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagttacaaataatataaaatatctcggcg
tgactctaactagggaagtgaaagatttgtatggtaaaaacttcaagtct
ctgaagagagaaattaaagaagatctcagaagatggaaggatctcctatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccataaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttatcaaggataaaggaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtgataaaaactcca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaatgaacccacacacctatggtcacttgatctttgacaagggagc
taaaccatccagtggagaaagacagtattttcaacatggtgctggcacaa
ctggtgtatcatgtagaagatgcgaatcgatccatactatctcttctact
aagtcaatctagtggatctaggacttcactaaacagagaaactgaactaa
gagggagaaaggggggaaagcttgagattgtgcataggaaatctgaacga
aacgcaatgcctggtgctgtaagatcggattaccaattgggactatgaac
ttcaagtttctcgcagcagatcggtctagacagagacctccacgatgtga
gacttgtatctagtctccaatccgaagttag
gaattcctatggctaggacttcaagtacaatgttaaataggtaggtagaa
agtcggcagccttgtcaattccctgattttagtgggatggcttccagctt
ctcaccatttactttgatgttggctactggtttgctgtaggttggtttta
tcatgtttaggtatgggccttgagccttggattcggttagcaagaatttt
attgaggattcttgcatcaatattcataagggaaattggtctgaagttct
ctgtctttgttgggtcgttctgtggtttaggtatcagagtaattgtggct
tcatagaatgaattgggcagagtaccttctgcttctcatttgtggaatag
tttgtgaagaactggaattagatcttctttgaaggtctgatagaactctg
cactaaacccatctggtcctggacttttttgtttgggagtctattaatga
ctgctgctatttctttaggggatataggactgtttagatcattaacctga
tcctgatttaactttgatacctggtatctactagaaatgtgtccatttcc
tccaggttttccagttttgttgagtatagctttttgtagaaggatctggt
ggtgttttggatttcttcaggatcagttgttatgtctcccttttctcatt
tagttaattaggatgctgtccctgtgccctctattgagtcttgctaaggg
tttatctatcattttattttctcaaagaaccagctcctctttggttggta
tttcaaatagttcttcttgtttctacttggttgatttcacccgttgagtt
ttattatttcctgctgtctattcctctttgagtgaatttgcttcttttgt
ttagagcttttaggtggtgttgtcaagctgctagtgtgtgtgcttttcta
gtttcttttttgcagaactcagagctttgagttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_36720451_36720967
seq2: B6Ng01-143H12.g_78_395 (reverse)

seq1  AGGTACTCTACCCAATTCATTCTATGAAGCCACAATTACTCTGAGACCTA  50
      ||||||||| |||||||||||||||||||||||||||||||||| |||||
seq2  AGGTACTCTGCCCAATTCATTCTATGAAGCCACAATTACTCTGATACCTA  50

seq1  AACCACAGAAAGAACCAACAAAGATAGAGAACTTCAGACCAATTTCCCTT  100
      |||||||||| || |||||||||| |||||||||||||||||||||||||
seq2  AACCACAGAACGACCCAACAAAGACAGAGAACTTCAGACCAATTTCCCTT  100

seq1  ATGAATATCGATGCAAAAATACTCAATAAAATTCTCGCTAACCGAATCCA  150
      |||||||| ||||||| ||| |||||||||||||| ||||||||||||||
seq2  ATGAATATTGATGCAAGAATCCTCAATAAAATTCTTGCTAACCGAATCCA  150

seq1  AGAACACATTAAAACAATCATCCATCCTGACCAAGTAGGTTTTATTCCAG  200
      ||                                                
seq2  AG------------------------------------------------  152

seq1  GGATGTAGGGATGGTTTAATATACGGAAATCCATCAACATAATCCATTAT  250
                                                        
seq2  --------------------------------------------------  152

seq1  GTAAACAAACACAAAGACAAAAACCACATGATCATCTCCTTAGGTGCAGA  300
                                                        
seq2  --------------------------------------------------  152

seq1  GAAAGCATTTGACAAAATCCAACACCTATTCACAATAAAAGTCTTAGAAA  350
          ||                                            
seq2  ----GC--------------------------------------------  154

seq1  GATCAGGAATTCAAGGCCCATACCTAAACAAGAGAAAAGCAATCTACAAC  400
                |||||||||||||||||||| || |||| ||| ||||| |
seq2  ----------TCAAGGCCCATACCTAAACATGATAAAACCAACCTACAGC  194

seq1  AAACCAGTAGCCAACATCAAAGTAAATGGTGA-------GAAGCAATCCC  443
      ||||||||||||||||||||||||||||||||       ||||| |||||
seq2  AAACCAGTAGCCAACATCAAAGTAAATGGTGAGAAGCTGGAAGCCATCCC  244

seq1  ACTAAAATCAGGGACTAGACAAGGCTGCCCACTTTCGCCCTACCTATTCA  493
      |||||||||||||| | |||||||||||| ||||||  |||||||||| |
seq2  ACTAAAATCAGGGAATTGACAAGGCTGCCGACTTTCTACCTACCTATTTA  294

seq1  ACATTGTACTTGAAGTCCTAGCCA  517
      ||||||||||||||||||||||||
seq2  ACATTGTACTTGAAGTCCTAGCCA  318