BAC Information

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BAC

Clone NameB6Ng01-144O10
Chromosome14 (Build37)
Map Location 32,591,354 - 32,730,109
singlet/doubletdoublet
Overlap geneAnkrd28
Upstream geneSfmbt1, Tmem110, Mustn1, Itih4, Itih3, Itih1, Nek4, Spcs1, Glt8d1, Gnl3, Pbrm1, EG432834, Nt5dc2, Stab1, Nisch, Tnnc1, Sema3g, Phf7, Bap1, Dnahc1, Capn7, Sh3bp5, Mettl6, Eaf1, Colq, Hacl1, Btd
Downstream geneGalntl2, Dph3, Oxnad1, Msmb, Ncoa4, Timm23, Parg, LOC665601, Ogdhl, 1700024G13Rik, Chat, Slc18a3, LOC100040834, EG665618, Ercc6, 9430077A04Rik, Prrxl1, 3425401B19Rik, 1810011H11Rik, 4922501K12Rik, E130203B14Rik, EG665658
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144O10.bB6Ng01-144O10.g
ACCDH942454DH942455
length1,1041,131
definitionDH942454|Mus musculus domesticus DNA, BAC clone: B6Ng01-144O10, 5' end.DH942455|Mus musculus domesticus DNA, BAC clone: B6Ng01-144O10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,729,005 - 32,730,109)(32,591,354 - 32,592,500)
sequence
gaattcagatgacaagattctcttaagatagccttatatctgtctgtaac
ttagtcctccctctattcctaaggaaagaggtggtttgttgaaggatatt
tgatcattctgtgaacctgaggttgtgttatttactgggggaaagaaatc
atttctagttgtggtgtggctcaacctttagcagacacctttaacccctc
tggctggaatacagacatgcatttagtacacacctttaatcccaaacaat
gaaagtaaagttagttttcagaaagaacactatgtttgaaagtgacatat
aattgagtggcagacaaagtgatgaatcagagaaagatttgaccaaatag
gatgtgcccaactctcacgagaagagagaagaatgggaagctacttaaga
gagagcagcacagagagaaaagagggggaaggcagtttagctgggacagt
tgtacagaggcaagttgcagagagaacaagccagacacaggtgaagacag
aatgagccagagaatggaaaggaacaagaacagattgccagagttaattt
gaggccaagcagagtaaaaagacagaggctgaaagggagagaagtcagat
taaatcagtcatcttggaaaggagtttgagccagaagagctgagttgaat
cagccagagaactgaaaagaactaggaaggatgagtttatttatccgtaa
gtctcagaggctgaaaacattctaggcttagagaagatcacacagaggct
agaagcttccaggactaagcctaggttagcagacagaggcagtaagcctc
gaagacaacaattacctcagacaaataaaagttatattagcagaggttgt
gccatctccccatatcctttcaccaataaaaggtttttctttgctccttc
taaagctttcagagttttaaagttttgtaccccactctgaatatctccag
gaggaactgtatatagtatctcctggtatgagtacatctttgtgagttaa
tacattcatcaccatcaaactttagtaccgcaaatattatttgagctgta
tacttagaaagaacaaatattctttcttgcaaggaaaagagggtgaaagg
ggaa
gaattctttgtaaaactctcaccacagttatgtacagaaatcatatctgc
tctcataatcaagttaggtacattttaaaatcatagaaatcttttctctt
aagttttaaaagaacccccatatctaaaaaaatttatgaaatgtcatatt
tgcaatttactgtcaaaatgtgattcagcaacagaaaaccgtgtttatgt
gcgctcacgctcctcccccgccccgcccccgccccgatgaatgagagtaa
ataacaaaacactatcaatgctgaaccaaagcaaggatatacaacagtct
tagagatacaacggtcttagagtggctttttttgacattcctatgtttga
aaatttcaaagcaaaaaattcagagaacacaaacctatcaacctgcttcc
aggaattatgggttttcagacagatttatatgtgtgtgtatgatatatac
acataaatgtatgacatatacattggagacacacacacacacacacacac
acacgtccagactacccctattggtctcaagtgagactctcctgccttct
ctaaaaacaactgttgcagaattatgcttttaaatgaaaccagcaacaaa
acaaaagcatatgtttaaacaaaaaatatgcttttaaaccaaaacataaa
aagctaccaaacaaaatcacaatattagaaaaggttttttgttctttttt
ttggtttttaaaaggaggataaaaaggttggtgtaagtgaatcaattgct
ttacctgaaagttaacatcttctttcttaaatattagtgctcggacttca
tctggatcaccattaaatatagcttgcaccagtgatggctaaaagaaatg
aaataaaagaaagaaagaaagaaagaaacaagcgtcaatcacatcattca
gcatagatgtaaagacatttctgcaggacttccaacctagtgcttttttc
tccctgcagcgtaatttttttgagggtatgggaatatgactttaatttca
tacagccctaatcatatcaagtatagggttcatcctgggtggggagccat
aaaaaaaggctactaatcgattcaatgccatttggaccaaactagtatat
ccctcattttatttctagtaaggctttgctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_32729005_32730109
seq2: B6Ng01-144O10.b_49_1151 (reverse)

seq1  TCCCCCTTCA-CCTC-TTCCTTTGCCAGAAAG-ATATTTGTTCTTTCTAA  47
      ||||| |||| |||| || | |||| |||||| |||||||||||||||||
seq2  TCCCCTTTCACCCTCTTTTCCTTGCAAGAAAGAATATTTGTTCTTTCTAA  50

seq1  GTATACAGCTTCCAAATAATATTTGCGTAACTAAAGTTTGATGGTGATTG  97
      ||||||||||  |||||||||||||||  |||||||||||||||||| ||
seq2  GTATACAGCT--CAAATAATATTTGCGGTACTAAAGTTTGATGGTGA-TG  97

seq1  AATTGTATTAACTCACAAAGATGTACTCATACCAGGGAGATACTATATAC  147
      || ||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AA-TGTATTAACTCACAAAGATGTACTCATACCA-GGAGATACTATATAC  145

seq1  AGTTCCTCCTGGAGATATTCAGAGTGGGGTACAAAACTTTAAAACTCTGA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCTCCTGGAGATATTCAGAGTGGGGTACAAAACTTTAAAACTCTGA  195

seq1  AAGCTTTAGAAGGAGCAAAGAAAAACCTTTTATTGGTGAAAGGATATGGG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTAGAAGGAGCAAAGAAAAACCTTTTATTGGTGAAAGGATATGGG  245

seq1  GAGATGGCACAACCTCTGCTAATATAACTTTTATTTGTCTGAGGTAATTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGCACAACCTCTGCTAATATAACTTTTATTTGTCTGAGGTAATTG  295

seq1  TTGTCTTCGAGGCTTACTGCCTCTGTCTGCTAACCTAGGCTTAGTCCTGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTCGAGGCTTACTGCCTCTGTCTGCTAACCTAGGCTTAGTCCTGG  345

seq1  AAGCTTCTAGCCTCTGTGTGATCTTCTCTAAGCCTAGAATGTTTTCAGCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCTAGCCTCTGTGTGATCTTCTCTAAGCCTAGAATGTTTTCAGCC  395

seq1  TCTGAGACTTACGGATAAATAAACTCATCCTTCCTAGTTCTTTTCAGTTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGACTTACGGATAAATAAACTCATCCTTCCTAGTTCTTTTCAGTTC  445

seq1  TCTGGCTGATTCAACTCAGCTCTTCTGGCTCAAACTCCTTTCCAAGATGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTGATTCAACTCAGCTCTTCTGGCTCAAACTCCTTTCCAAGATGA  495

seq1  CTGATTTAATCTGACTTCTCTCCCTTTCAGCCTCTGTCTTTTTACTCTGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTAATCTGACTTCTCTCCCTTTCAGCCTCTGTCTTTTTACTCTGC  545

seq1  TTGGCCTCAAATTAACTCTGGCAATCTGTTCTTGTTCCTTTCCATTCTCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCTCAAATTAACTCTGGCAATCTGTTCTTGTTCCTTTCCATTCTCT  595

seq1  GGCTCATTCTGTCTTCACCTGTGTCTGGCTTGTTCTCTCTGCAACTTGCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCATTCTGTCTTCACCTGTGTCTGGCTTGTTCTCTCTGCAACTTGCC  645

seq1  TCTGTACAACTGTCCCAGCTAAACTGCCTTCCCCCTCTTTTCTCTCTGTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTACAACTGTCCCAGCTAAACTGCCTTCCCCCTCTTTTCTCTCTGTG  695

seq1  CTGCTCTCTCTTAAGTAGCTTCCCATTCTTCTCTCTTCTCGTGAGAGTTG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTCTCTTAAGTAGCTTCCCATTCTTCTCTCTTCTCGTGAGAGTTG  745

seq1  GGCACATCCTATTTGGTCAAATCTTTCTCTGATTCATCACTTTGTCTGCC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACATCCTATTTGGTCAAATCTTTCTCTGATTCATCACTTTGTCTGCC  795

seq1  ACTCAATTATATGTCACTTTCAAACATAGTGTTCTTTCTGAAAACTAACT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAATTATATGTCACTTTCAAACATAGTGTTCTTTCTGAAAACTAACT  845

seq1  TTACTTTCATTGTTTGGGATTAAAGGTGTGTACTAAATGCATGTCTGTAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTCATTGTTTGGGATTAAAGGTGTGTACTAAATGCATGTCTGTAT  895

seq1  TCCAGCCAGAGGGGTTAAAGGTGTCTGCTAAAGGTTGAGCCACACCACAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCCAGAGGGGTTAAAGGTGTCTGCTAAAGGTTGAGCCACACCACAA  945

seq1  CTAGAAATGATTTCTTTCCCCCAGTAAATAACACAACCTCAGGTTCACAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAATGATTTCTTTCCCCCAGTAAATAACACAACCTCAGGTTCACAG  995

seq1  AATGATCAAATATCCTTCAACAAACCACCTCTTTCCTTAGGAATAGAGGG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATCAAATATCCTTCAACAAACCACCTCTTTCCTTAGGAATAGAGGG  1045

seq1  AGGACTAAGTTACAGACAGATATAAGGCTATCTTAAGAGAATCTTGTCAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTAAGTTACAGACAGATATAAGGCTATCTTAAGAGAATCTTGTCAT  1095

seq1  CTGAATTC  1105
      ||||||||
seq2  CTGAATTC  1103

seq1: chr14_32591354_32592500
seq2: B6Ng01-144O10.g_67_1197

seq1  GAATTCTTTGTAAAACTCTCACCACAGTTATGTACAGAAATCATATCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTAAAACTCTCACCACAGTTATGTACAGAAATCATATCTGC  50

seq1  TCTCATAATCAAGTTAGGTACATTTTAAAATCATAGAAATCTTTTCTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATAATCAAGTTAGGTACATTTTAAAATCATAGAAATCTTTTCTCTT  100

seq1  AAGTTTTAAAAGAACCCCCATATCTAAAAAAATTTATGAAATGTCATATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTAAAAGAACCCCCATATCTAAAAAAATTTATGAAATGTCATATT  150

seq1  TGCAATTTACTGTCAAAATGTGATTCAGCAACAGAAAACCGTGTTTATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATTTACTGTCAAAATGTGATTCAGCAACAGAAAACCGTGTTTATGT  200

seq1  GCGCTCACGCTCCTCCCCCGCCCCGCCCCCGCCCCGATGAATGAGAGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTCACGCTCCTCCCCCGCCCCGCCCCCGCCCCGATGAATGAGAGTAA  250

seq1  ATAACAAAACACTATCAATGCTGAACCAAAGCAAGGATATACAACAGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAAAACACTATCAATGCTGAACCAAAGCAAGGATATACAACAGTCT  300

seq1  TAGAGATACAACGGTCTTAGAGTGGCTTTTTTTGACATTCCTATGTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATACAACGGTCTTAGAGTGGCTTTTTTTGACATTCCTATGTTTGA  350

seq1  AAATTTCAAAGCAAAAAATTCAGAGAACACAAACCTATCAACCTGCTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCAAAGCAAAAAATTCAGAGAACACAAACCTATCAACCTGCTTCC  400

seq1  AGGAATTATGGGTTTTCAGACAGATTTATATGTGTGTGTATGATATATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTATGGGTTTTCAGACAGATTTATATGTGTGTGTATGATATATAC  450

seq1  ACATAAATGTATGACATATACATTGGAGACACACACACACACACACACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAATGTATGACATATACATTGGAGACACACACACACACACACACAC  500

seq1  ACACGTCCAGACTACCCCTATTGGTCTCAAGTGAGACTCTCCTGCCTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGTCCAGACTACCCCTATTGGTCTCAAGTGAGACTCTCCTGCCTTCT  550

seq1  CTAAAAACAACTGTTGCAGAATTATGCTTTTAAATGAAACCAGCAACAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAACAACTGTTGCAGAATTATGCTTTTAAATGAAACCAGCAACAAA  600

seq1  ACAAAAGCATATGTTTAAACAAAAAATATGCTTTTAAACCAAAACATAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGCATATGTTTAAACAAAAAATATGCTTTTAAACCAAAACATAAA  650

seq1  AAGCTACCAAACAAAATCACAATATTAGAAAAGGTTTTTTGTTCTTTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTACCAAACAAAATCACAATATTAGAAAAGGTTTTTTGTTCTTTTTT  700

seq1  TTGGTTTTTAAAAGGAGGATAAAAAGGTTGGTGTAAGTGAATCAATTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTTTAAAAGGAGGATAAAAAGGTTGGTGTAAGTGAATCAATTGCT  750

seq1  TTACCTGAAAGTTAACATCTTCTTTCTTAAATATTAGTGCTCGGACTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTGAAAGTTAACATCTTCTTTCTTAAATATTAGTGCTCGGACTTCA  800

seq1  TCTGGATCACCATTAAATATAGCTTGCACCAGTGATGGCTAAAAGAAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATCACCATTAAATATAGCTTGCACCAGTGATGGCTAAAAGAAATG  850

seq1  AAAATAAAAAGAAAGAAAGAAAGAAAAGAAACAAGCGTCAATCACATCAT  900
      |||   ||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAA--TAAAAGAAAGAAAGAAAG-AAAGAAACAAGCGTCAATCACATCAT  897

seq1  TCAGCATAGATGTAAAGACATTTCTGCAGGACTTCCAACCTAGTGGCTTT  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCAGCATAGATGTAAAGACATTTCTGCAGGACTTCCAACCTAGT-GCTTT  946

seq1  TTTCTTCCCTGCAGCCGTAATATTTTTGAGGGGTAT-GGAATATGAACTA  999
      |||| ||||||||| |||||| ||||||| |||||| |||||||| ||| 
seq2  TTTC-TCCCTGCAG-CGTAATTTTTTTGA-GGGTATGGGAATATG-ACTT  992

seq1  TATATTTCATACAG-CCTAATCATATCAAAGTATAGGGTTCATCCTGGGT  1048
      || ||||||||||| |||||||||||| ||||||||||||||||||||||
seq2  TA-ATTTCATACAGCCCTAATCATATC-AAGTATAGGGTTCATCCTGGGT  1040

seq1  -GGGAGCCATAAAAAAAAGCCTACCTAATCTATTCAAATGCAATTTGACC  1097
       ||||||||| |||||||| ||| |||||| |||| ||||| |||||  |
seq2  GGGGAGCCAT-AAAAAAAGGCTA-CTAATCGATTC-AATGCCATTTGGAC  1087

seq1  AAAACTAAGTAATACGCTCATTTTATTTCTTAAGTAAAAGCCTTTTGCTT  1147
       ||||| ||||   | ||||||||||||||  |||  ||| | |||||||
seq2  CAAACT-AGTATATCCCTCATTTTATTTCT--AGT--AAGGC-TTTGCTT  1131