BAC Information

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BAC

Clone NameB6Ng01-145A21
Chromosome14 (Build37)
Map Location 109,544,850 - 109,545,861
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668761, Slitrk1
Downstream geneLOC640892
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145A21.bB6Ng01-145A21.g
ACCDH942566DH942567
length1,0091,020
definitionDH942566|Mus musculus domesticus DNA, BAC clone: B6Ng01-145A21, 5' end.DH942567|Mus musculus domesticus DNA, BAC clone: B6Ng01-145A21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgaaatgcaaatttgaaatgttccaattactgctataagaaa
tataaataaaccctgtggtcctgagaaagcgacttccatctctgtaatct
gtctcttgagtgcagacacaaatgatgcattcccagaggctcagaaaaga
gtcagttgtgttcaggagcaaccatctatgtgtagccagctatgtccaac
ctgcacagggtctatcttctgcaggagatgctgtttcccaacaagatata
ggatagccaggcctacatagaaagttcatgtctcaaaatacaaagctcaa
aacaaaccaaagcaaaaccctttaccactttcactaaaacatacattgtc
acaaattgttgaacagatttataaaaatgtgcaatattttgatatataaa
tctataatataatttttatatctgagtaaacttaatcatatatttatttt
attattcatttatttattttaaagtaaggaggtattacctttacattttc
taccaaatttcttttttttttttttttttttttagtagatactttctctc
tttacatttcaaatgctatcccggaagtttcctataccctctctctgccc
agctcccctacccacctactctcacgtcttgccctggtgtttccctgtac
tggggcatatacagtttgcaataccaaggggactctcttcccagtgatgg
ccgactaggccatcttctgctgcatatgcagctagagacatgagctctgg
gggtaccggttagttcatattgttgttccacctataggattgcagacccc
ttcagctccttggggtgctttctctagcttctccattggggacctggtgt
tccatcctatagatgactgtgagcattcacttctgtatttgccaggcact
gacatagactcatagagacagctatttcagggtccttcagaaaaatctca
tggcatatgaaaactgtcttgttttggtggctgaattatggatggatccc
caggtgggg
gaattctttgtttagctttctgccccattttttaatggagtttttgattt
tctagagtccatcctttttagttctttatatatattggatattagcccca
tatctgatttagaattggtaaagatcctttcccagtctgttggtggcctt
tttgtcttattgatagtgtctttagccttacagaaggtttacaattttat
taggtcccatttgtcaattcttgatcttacagaacaagccattgctgttc
tattcatgaatttccccccgtgcccatatcttcgtggtttttccccacaa
agttgaaatacagatcaattgtgataaaaatttcatggtactagtatatc
gacagagaggtagaccaatggaatagaattgaagacccagaaatgaaccc
acacacctatggtcccttgatctttgacaagagagctaaaaccatacagt
ggaaaaaaaaaaagacagcattttagtcctggcacaactggaggttatca
tgtagaagaatgaaaattgatccattctaatcaccaactctgttttatgt
atttatctgtatttttatttagtctgctttaattattaccaaataagtat
gaactttagtgtttaatatatgataatagaataaattgcaaatattttta
atattttcaatactgatttatatactttaatatcacttgatatattttct
gattatgtaaatctaatggaagtgttcactgtttctaatgagttttaatt
tgatgtaattttaataattggcaaaaatttttaaaagctacgtttctttc
aaggggaattttgttaagcaatttatattgaattgaaatacatattttaa
aatttttcaacaaaataatttttaagtatattttaaaatttgtgtgttaa
gacaatattacaatttattcttctataatatagattaacttgttttatat
atatattcatatatatatatatgatattatataatataactatgtttatt
aattataataataatagtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_109544850_109545861
seq2: B6Ng01-145A21.b_45_1053

seq1  GAATTCTTTGAAATGCAAATTTGAAATGTTCCAATTACTGCTATAAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGAAATGCAAATTTGAAATGTTCCAATTACTGCTATAAGAAA  50

seq1  TATAAATAAACCCTGTGGTCCTGAGAAAGCGACTTCCATCTCTGTAATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATAAACCCTGTGGTCCTGAGAAAGCGACTTCCATCTCTGTAATCT  100

seq1  GTCTCTTGAGTGCAGACACAAATGATGCATTCCCAGAGGCTCAGAAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTTGAGTGCAGACACAAATGATGCATTCCCAGAGGCTCAGAAAAGA  150

seq1  GTCAGTTGTGTTCAGGAGCAACCATCTATGTGTAGCCAGCTATGTCCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTTGTGTTCAGGAGCAACCATCTATGTGTAGCCAGCTATGTCCAAC  200

seq1  CTGCACAGGGTCTATCTTCTGCAGGAGATGCTGTTTCCCAACAAGATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACAGGGTCTATCTTCTGCAGGAGATGCTGTTTCCCAACAAGATATA  250

seq1  GGATAGCCAGGCCTACATAGAAAGTTCATGTCTCAAAATACAAAGCTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGCCAGGCCTACATAGAAAGTTCATGTCTCAAAATACAAAGCTCAA  300

seq1  AACAAACCAAAGCAAAACCCTTTACCACTTTCACTAAAACATACATTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACCAAAGCAAAACCCTTTACCACTTTCACTAAAACATACATTGTC  350

seq1  ACAAATTGTTGAACAGATTTATAAAAATGTGCAATATTTTGATATATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATTGTTGAACAGATTTATAAAAATGTGCAATATTTTGATATATAAA  400

seq1  TCTATAATATAATTTTTATATCTGAGTAAACTTAATCATATATTTATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAATATAATTTTTATATCTGAGTAAACTTAATCATATATTTATTTT  450

seq1  ATTATTCATTTATTTATTTTAAAGTAAGGAGGTATTACCTTTACATTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCATTTATTTATTTTAAAGTAAGGAGGTATTACCTTTACATTTTC  500

seq1  TACCAAATTTCTTTTTTTTTTTTTTTTTTTTTTAGTAGATACTTTCTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAATTTCTTTTTTTTTTTTTTTTTTTTTTAGTAGATACTTTCTCTC  550

seq1  TTTACATTTCAAATGCTATCCCGGAAGTTTCCTATACCCTCTCTCTGCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACATTTCAAATGCTATCCCGGAAGTTTCCTATACCCTCTCTCTGCCC  600

seq1  AGCTCCCCTACCCACCTACTCTCACGTCTTGCCCTGGTGTTTCCCTGTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCCCTACCCACCTACTCTCACGTCTTGCCCTGGTGTTTCCCTGTAC  650

seq1  TGGGGCATATACAGTTTGCAATACCAAGGGGACTCTCTTCCCAGTGATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCATATACAGTTTGCAATACCAAGGGGACTCTCTTCCCAGTGATGG  700

seq1  CCGACTAGGCCATCTTCTGCTGCATATGCAGCTAGAGACATGAGCTCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACTAGGCCATCTTCTGCTGCATATGCAGCTAGAGACATGAGCTCTGG  750

seq1  GGGTACCGGTTAGTTCATATTGTTGTTCCACCTATAGGATTGCAGACCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACCGGTTAGTTCATATTGTTGTTCCACCTATAGGATTGCAGACCCC  800

seq1  TTCAGCTCCTT-GGGTGCTTTCTCTAGCTTCTCCATTGGGGACCCTGTGT  849
      ||||||||||| ||||||||||||||||||||||||||||||||  ||||
seq2  TTCAGCTCCTTGGGGTGCTTTCTCTAGCTTCTCCATTGGGGACCTGGTGT  850

seq1  TCCATCCTATAGATGACTGTGAGCATTCACTTCTGTATTTGCCAGGCACT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCTATAGATGACTGTGAGCATTCACTTCTGTATTTGCCAGGCACT  900

seq1  GACATAGACTCATAAGAGACAGCTATATCAGGGTCCCTTCAGAAAAATCT  949
      ||||||||||||| |||||||||||| ||||||| |||||||||||||||
seq2  GACATAGACTCAT-AGAGACAGCTATTTCAGGGT-CCTTCAGAAAAATCT  948

seq1  CATTGGCATATGAAATAGTGTCTTGTTTTGGTGGCTG-ATTATGGGATGG  998
      || |||||||||||| | ||||||||||||||||||| ||||| ||||||
seq2  CA-TGGCATATGAAA-ACTGTCTTGTTTTGGTGGCTGAATTAT-GGATGG  995

seq1  ATCCCCAGGTGGGG  1012
      ||||||||||||||
seq2  ATCCCCAGGTGGGG  1009