BAC Information

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BAC

Clone NameB6Ng01-145K19
Chromosome14 (Build37)
Map Location 110,966,316 - 110,967,454
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneSlitrk6, EG668772, EG622052, LOC100043491, LOC100043494
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145K19.bB6Ng01-145K19.g
ACCDH943014DH943015
length9041,126
definitionDH943014|Mus musculus domesticus DNA, BAC clone: B6Ng01-145K19, 5' end.DH943015|Mus musculus domesticus DNA, BAC clone: B6Ng01-145K19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtctgcttgccctctgggcttcagtccttttctctcacaatat
agcaggtcagtttcccctctccacccctacctcccatcaattttcctccc
aggttccttccttcctccccaattgtgtttgctttcttctacctacaagt
gggactgaggcattctcacttggtcccatcagcttattgttctttctgaa
ctctgtggactgtatcttgggaattctgtacttttatttttgactaatat
ccatttattagtgagtacataccatgcttatccttttgggtctgagttac
ctcactcaggatgatattttctagttccattcatttgcctgcaaaaccca
ggatgtcctcattcttaatagctgagtagtattccattgtgtaaatgaac
cacattttctgtatccattctcctatcatgggacatctaggttgtttcca
gattctggctatcagaaggccactatttacataatgaaccatgccactgg
ggcatgggtagggcatcttttgggtaaattcccaagagcggtatagctgg
gtcttcaggtagatctatttccaattttctaaggaacctgcggattgatt
tccaaagtgattgtaccagtttgcaaatccaccaacaatgtaggagtgtt
cctcttcctccacatcctctccaacatgtgttgtcacctgaggtgttgat
cttagccattctgattggtgtaaggtggaatctcagggtccttttgattt
gcatttctctgatcactaagaactttgtacatttctttagtgcttttcag
cctttgggattcctctcttgtgttcagtcagagaaggtgcacttaaccct
taagagactggaggccccagggaggttagaggtctgttggggtgaggggt
tggg

gaattctatatccaaaatccctttttctgttttttaacattattctgata
ttttcattattttgtgtgtatatgtatgtgtgtattaatgcacatctttg
aaatacttatggaagttatgggagagacagcattgtgttccaccatgtga
tggctgttgagcattgcatatgcaatcacaataaaatgatgtttgcctat
tttttttgtgaaaatatcagtcactgagatgttaactagaagtggaaaat
tgtatttcagctgtcagttttgcattattaacgtaagattctgtattttt
tcaatttgtttatactctgaataggcaataacatctatggtataagtgta
gttagattgtttccacttcttagctactgtgattagaacaggaagaagat
tagatgcacaattatctctgaggtgtatttagcctccttgtggtaatcct
caggaggggtacagtaggatcataactatagttctcattgtagaacaatt
ttttgctctctttgttgtattgccagaaaccaacacactgatttccaaag
tggttgtgccagtttgatttctactagtgatgtattctatgtgtgtatag
cttgttgtatatgttcatgtacttttattttttttcttttactgatttct
cctaaaagtctaatttaaagtttacagtgttataaaagttgatagtattc
tgtttgttgaccttttccctatatcctctgtggagaagtaaaggattaat
tcttcagcttgtacaattgaaaaaggttttaaaaacacattgttaatagc
acacaatgaattattgtctatgaatagatgcagtatttaacttcatattt
tataaaataaatgacaaaatacgtacataaaaggctccattgagaagtca
cttaagttacaaacaaaatgtacagactaatggtgaagttttagttttac
cttggtgtgaaaagagtatggttaataatgtatatatttgcctatgtcac
taattcccgtgtgataaataaaaccaccagcatgggaagaatatccagaa
aatccttcgcaatcgattctcataagacattgcctataaatcgaaatggt
agtctaagtaagttgctgctatccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_110966316_110967454
seq2: B6Ng01-145K19.g_68_1193

seq1  GAATTCTATATCCAAAATCCCTTTTTCTGTTTTTTAACATTATTCTGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATATCCAAAATCCCTTTTTCTGTTTTTTAACATTATTCTGATA  50

seq1  TTTTCATTATTTTGTGTGTATATGTATGTGTGTATTAATGCACATCTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATTATTTTGTGTGTATATGTATGTGTGTATTAATGCACATCTTTG  100

seq1  AAATACTTATGGAAGTTATGGGAGAGACAGCATTGTGTTCCACCATGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTTATGGAAGTTATGGGAGAGACAGCATTGTGTTCCACCATGTGA  150

seq1  TGGCTGTTGAGCATTGCATATGCAATCACAATAAAATGATGTTTGCCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTTGAGCATTGCATATGCAATCACAATAAAATGATGTTTGCCTAT  200

seq1  TTTTTTTGTGAAAATATCAGTCACTGAGATGTTAACTAGAAGTGGAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGTGAAAATATCAGTCACTGAGATGTTAACTAGAAGTGGAAAAT  250

seq1  TGTATTTCAGCTGTCAGTTTTGCATTATTAACGTAAGATTCTGTATTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTCAGCTGTCAGTTTTGCATTATTAACGTAAGATTCTGTATTTTT  300

seq1  TCAATTTGTTTATACTCTGAATAGGCAATAACATCTATGGTATAAGTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTGTTTATACTCTGAATAGGCAATAACATCTATGGTATAAGTGTA  350

seq1  GTTAGATTGTTTCCACTTCTTAGCTACTGTGATTAGAACAGGAAGAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGATTGTTTCCACTTCTTAGCTACTGTGATTAGAACAGGAAGAAGAT  400

seq1  TAGATGCACAATTATCTCTGAGGTGTATTTAGCCTCCTTGTGGTAATCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGCACAATTATCTCTGAGGTGTATTTAGCCTCCTTGTGGTAATCCT  450

seq1  CAGGAGGGGTACAGTAGGATCATAACTATAGTTCTCATTGTAGAACAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGGGTACAGTAGGATCATAACTATAGTTCTCATTGTAGAACAATT  500

seq1  TTTTGCTCTCTTTGTTGTATTGCCAGAAACCAACACACTGATTTCCAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTCTCTTTGTTGTATTGCCAGAAACCAACACACTGATTTCCAAAG  550

seq1  TGGTTGTGCCAGTTTGATTTCTACTAGTGATGTATTCTATGTGTGTATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTGCCAGTTTGATTTCTACTAGTGATGTATTCTATGTGTGTATAG  600

seq1  CTTGTTGTATATGTTCATGTACTTTTATTTTTTTTCTTTTACTGATTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTGTATATGTTCATGTACTTTTATTTTTTTTCTTTTACTGATTTCT  650

seq1  CCTAAAAGTCTAATTTAAAGTTTACAGTGTTATAAAAGTTGATAGTATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAAGTCTAATTTAAAGTTTACAGTGTTATAAAAGTTGATAGTATTC  700

seq1  TGTTTGTTGACCTTTTCCCTATATCCTCTGTGGAGAAGTAAAGGATTAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTGACCTTTTCCCTATATCCTCTGTGGAGAAGTAAAGGATTAAT  750

seq1  TCTTCAGCTTGTACAATTGAAAAAGGTTTTAAAAACACATTGTTAATAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGCTTGTACAATTGAAAAAGGTTTTAAAAACACATTGTTAATAGC  800

seq1  ACACAATGAATTATTGTCTATGAATAGATGCAGTATTTAACTTCATATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAATGAATTATTGTCTATGAATAGATGCAGTATTTAACTTCATATTT  850

seq1  TATAAAATAAATGACAAAATACGTACATAAAAGGCTCCATTGAGAAGTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATAAATGACAAAATACGTACATAAAAGGCTCCATTGAGAAGTCA  900

seq1  CTTAAGTTACAAACAAAAATGTACAGACTAATGGTGAAGTTTTAGTTTTA  950
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTTAAGTTACAAAC-AAAATGTACAGACTAATGGTGAAGTTTTAGTTTTA  949

seq1  CCT--GTGTGAAAAGAAGTATGGTTACATAATGTATATATTTGCCTATGT  998
      |||  |||||||||| |||||||||| |||||||||||||||||||||||
seq2  CCTTGGTGTGAAAAG-AGTATGGTTA-ATAATGTATATATTTGCCTATGT  997

seq1  CACT-ATTCCCGTGTGATTAAATAATACCAACAAGCATGGG-AGAATATT  1046
      |||| |||||||||||| ||||||| ||| || |||||||| ||||||| 
seq2  CACTAATTCCCGTGTGA-TAAATAAAACC-ACCAGCATGGGAAGAATATC  1045

seq1  CAGAAAAACCTTCACATACGATTTCTCATTAGACACATTGCC-ATAAAAC  1095
      ||||||| ||||| ||  ||| ||||||| ||  |||||||| ||||| |
seq2  CAGAAAATCCTTCGCAATCGA-TTCTCATAAG--ACATTGCCTATAAATC  1092

seq1  TGAATAGATGGCTCTAAAGTTAAAAGTGTTTGCTGCTATTCCAG  1139
        ||| |  | ||   ||||   |||   ||||||||| |||||
seq2  GAAATGGTAGTCT---AAGT---AAG---TTGCTGCTA-TCCAG  1126


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