BAC Information

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BAC

Clone NameB6Ng01-145L12
Chromosome14 (Build37)
Map Location 33,959,844 - 34,132,285
singlet/doubletdoublet
Overlap geneEG622657, Arhgap22
Upstream geneMsmb, Ncoa4, Timm23, Parg, LOC665601, Ogdhl, 1700024G13Rik, Chat, Slc18a3, LOC100040834, EG665618, Ercc6, 9430077A04Rik, Prrxl1, 3425401B19Rik, 1810011H11Rik, 4922501K12Rik, E130203B14Rik, EG665658, Lrrc18
Downstream geneMapk8, LOC100040079, LOC665681, Frmpd2, LOC100040093, Ptpn20, Gdf10, Gdf2, Rbp3, Zfp488, EG665754, EG432838, Antxrl, Anxa8, LOC100041131, LOC665768, Ppyr1, LOC100041163, Gprin2, Syt15, 3110001K24Rik, LOC623142, Glud1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145L12.bB6Ng01-145L12.g
ACCDH943046DH943047
length1,056254
definitionDH943046|Mus musculus domesticus DNA, BAC clone: B6Ng01-145L12, 5' end.DH943047|Mus musculus domesticus DNA, BAC clone: B6Ng01-145L12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,959,844 - 33,960,900)(34,132,032 - 34,132,285)
sequence
gaattccagaggctgcctcccttacttgataagggtttagcctctgttaa
gcaatatttcctccacttgccacacaaaatgagcttttttgtgtgcaaag
ctgaaattgcacaggtggaaagtagattaagggaagatctaatatccacg
ggtctaggtcatgtctccaaaggtcagaagcatcagaccttgtgacaaat
gcaaatggactcagagaccagcatagcctggtcaggacatcatactggct
ctccagttacctggagacacagtgaggacccaccagaagcctcctgatgg
aacttgaagccttcaagctgaggataagtgacgctgtcaaacaccttcag
ctctgacctcccacaggttgtcagccacatcaccagctcgatgagctcct
ccagatggggctccaccacaccctgggtcagcccgttatacctgcaggac
aaacagggtcagctcctggatggaacagctatgtgtgtgtacagtgctcc
tcccagaggccagaagaggatgctagagctccccaaactgaagttactgg
tggttgtaagccaccatgtaggtgtttgggactgaaactagtcctccaca
aaagcaaaggctcttaaccactgagtcatctctctgacccccaaaagttc
cctctcatcatgtgtgtactctgtaacttccattgccattcgtcatctgt
ggcctccaaacagcaactggaacttgggtgtaggttgtttgataaagtgc
ttgtctcgtattcagagggacctggtttggatccctaatactgcatagga
ccagtcgtggtgacgtttacccataatcttagaattcgaaaggtgtgtac
aggagtatcgagatcattcttgataatatagagagcttgagaccattctt
gagttatgtgagttacatgagaccttatcaaaataaaatataaaatataa
taaatgacatttcttaaacacacacactgagaaagagagagagaatcagc
aatgaattcagaaattaaaaaaaaatcatgctttaactaatttgttaaat
atggct
ttgtccacatggctagggaaactatgtataggggccattcattgcagcct
tgctggcaactgtttaacactagagccagcaaaatgtttctcagtaaagg
aattttctaatgcatggtgataaagtggagcatggtagttggggtggatc
tactgagaggggcttgatgtgcccaggtaaaacaccaccaggtgttctag
acacttgggaggtggaaatccaggcttgcttctttttgggatgggggggg
gggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_33959844_33960900
seq2: B6Ng01-145L12.b_48_1103

seq1  GAATTCCAGAGGCTGCCTCCCTTACTTGATAAGGGTTTAGCCTCTGTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGGCTGCCTCCCTTACTTGATAAGGGTTTAGCCTCTGTTAA  50

seq1  GCAATATTTCCTCCACTTGCCACACAAAATGAGCTTTTTTGTGTGCAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATATTTCCTCCACTTGCCACACAAAATGAGCTTTTTTGTGTGCAAAG  100

seq1  CTGAAATTGCACAGGTGGAAAGTAGATTAAGGGAAGATCTAATATCCACG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATTGCACAGGTGGAAAGTAGATTAAGGGAAGATCTAATATCCACG  150

seq1  GGTCTAGGTCATGTCTCCAAAGGTCAGAAGCATCAGACCTTGTGACAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTAGGTCATGTCTCCAAAGGTCAGAAGCATCAGACCTTGTGACAAAT  200

seq1  GCAAATGGACTCAGAGACCAGCATAGCCTGGTCAGGACATCATACTGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGGACTCAGAGACCAGCATAGCCTGGTCAGGACATCATACTGGCT  250

seq1  CTCCAGTTACCTGGAGACACAGTGAGGACCCACCAGAAGCCTCCTGATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTTACCTGGAGACACAGTGAGGACCCACCAGAAGCCTCCTGATGG  300

seq1  AACTTGAAGCCTTCAAGCTGAGGATAAGTGACGCTGTCAAACACCTTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGAAGCCTTCAAGCTGAGGATAAGTGACGCTGTCAAACACCTTCAG  350

seq1  CTCTGACCTCCCACAGGTTGTCAGCCACATCACCAGCTCGATGAGCTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGACCTCCCACAGGTTGTCAGCCACATCACCAGCTCGATGAGCTCCT  400

seq1  CCAGATGGGGCTCCACCACACCCTGGGTCAGCCCGTTATACCTGCAGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGGGGCTCCACCACACCCTGGGTCAGCCCGTTATACCTGCAGGAC  450

seq1  AAACAGGGTCAGCTCCTGGATGGAACAGCTATGTGTGTGTACAGTGCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGGGTCAGCTCCTGGATGGAACAGCTATGTGTGTGTACAGTGCTCC  500

seq1  TCCCAGAGGCCAGAAGAGGATGCTAGAGCTCCCCAAACTGAAGTTACTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAGGCCAGAAGAGGATGCTAGAGCTCCCCAAACTGAAGTTACTGG  550

seq1  TGGTTGTAAGCCACCATGTAGGTGTTTGGGACTGAAACTAGTCCTCCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTAAGCCACCATGTAGGTGTTTGGGACTGAAACTAGTCCTCCACA  600

seq1  AAAGCAAAGGCTCTTAACCACTGAGTCATCTCTCTGACCCCCAAAAGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAAGGCTCTTAACCACTGAGTCATCTCTCTGACCCCCAAAAGTTC  650

seq1  CCTCTCATCATGTGTGTACTCTGTAACTTCCATTGCCATTCGTCATCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCATCATGTGTGTACTCTGTAACTTCCATTGCCATTCGTCATCTGT  700

seq1  GGCCTCCAAACAGCAACTGGAACTTGGGTGTAGGTTGTTTGATAAAGTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCCAAACAGCAACTGGAACTTGGGTGTAGGTTGTTTGATAAAGTGC  750

seq1  TTGTCTCGTATTCAGAGGGACCTGGTTTGGATCCCTAATACTGCATAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCGTATTCAGAGGGACCTGGTTTGGATCCCTAATACTGCATAGGA  800

seq1  CCAGTCGTGGTGACGTTTACCCATAATCTTAGAATTCGAAAGGTGTGTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCGTGGTGACGTTTACCCATAATCTTAGAATTCGAAAGGTGTGTAC  850

seq1  AGGAGTATCGAGATCATTCTTGATAATATAGAGAGCTTGAGACCA-TCCT  899
      ||||||||||||||||||||||||||||||||||||||||||||| || |
seq2  AGGAGTATCGAGATCATTCTTGATAATATAGAGAGCTTGAGACCATTCTT  900

seq1  GAGTTATGTGAGTTACATGAGACCTTATCAAAATAAAATATAAAATAAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GAGTTATGTGAGTTACATGAGACCTTATCAAAATAAAATATAAAATATAA  950

seq1  TAAATGACATTTC-TAAACACACACACTGAGAAAGAGAGAGAG-ATCAGC  997
      ||||||||||||| ||||||||||||||||||||||||||||| ||||||
seq2  TAAATGACATTTCTTAAACACACACACTGAGAAAGAGAGAGAGAATCAGC  1000

seq1  AAAGAATTCCAGAAATTAAAAAAAAAATCATGCTTTAAACTAATTTGTTA  1047
      || ||||| |||||||| |||||||||||||||||| |||||||||||||
seq2  AATGAATT-CAGAAATT-AAAAAAAAATCATGCTTT-AACTAATTTGTTA  1047

seq1  TAATATGGCT  1057
       |||||||||
seq2  -AATATGGCT  1056

seq1: chr14_34132032_34132285
seq2: B6Ng01-145L12.g_74_327 (reverse)

seq1  CCCCCCCCCCCCATCCCAAAAAGAAGCAAGCCTGGATTTCCACCTCCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCCATCCCAAAAAGAAGCAAGCCTGGATTTCCACCTCCCAA  50

seq1  GTGTCTAGAACACCTGGTGGTGTTTTACCTGGGCACATCAAGCCCCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTAGAACACCTGGTGGTGTTTTACCTGGGCACATCAAGCCCCTCTC  100

seq1  AGTAGATCCACCCCAACTACCATGCTCCACTTTATCACCATGCATTAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGATCCACCCCAACTACCATGCTCCACTTTATCACCATGCATTAGAA  150

seq1  AATTCCTTTACTGAGAAACATTTTGCTGGCTCTAGTGTTAAACAGTTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTTTACTGAGAAACATTTTGCTGGCTCTAGTGTTAAACAGTTGCC  200

seq1  AGCAAGGCTGCAATGAATGGCCCCTATACATAGTTTCCCTAGCCATGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGGCTGCAATGAATGGCCCCTATACATAGTTTCCCTAGCCATGTGG  250

seq1  ACAA  254
      ||||
seq2  ACAA  254