BAC Information

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BAC

Clone NameB6Ng01-145N22
Chromosome14 (Build37)
Map Location 12,738,348 - 12,871,229
singlet/doubletdoublet
Overlap genePtprg, LOC100042441
Upstream geneFhit, LOC100041974, LOC667030, EG382843, LOC100042427, LOC667059, LOC100041996
Downstream gene3830406C13Rik, EG667072, Fezf2, Cadps, EG432822, LOC100042022, LOC100042026
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145N22.bB6Ng01-145N22.g
ACCDH943158DH943159
length1,031250
definitionDH943158|Mus musculus domesticus DNA, BAC clone: B6Ng01-145N22, 5' end.DH943159|Mus musculus domesticus DNA, BAC clone: B6Ng01-145N22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,870,191 - 12,871,229)(12,738,348 - 12,738,597)
sequence
gaattcaaatagtttggtgaggcatgcatctaaatcaatattcaaagcat
tttacaaagtatcctttcctatacaaacagcacccactcacctacccacc
cccactcccgccccccagaacagggcctggttgctcacagtggctttgaa
ggagggtgggaggtaacagccagctatttaaaaagcatcttgttggaagg
taaggtcagaaaacaatgggttaacagccaggtggaaattgcttgagagt
gagctgtcactgttgtcaaaggcattccagcctctgtcagttgcagagag
gagcatggctcagtgggtaaaggcacttgccttggccaagcttgacaacg
tcagataaaaaaaactaaggatcatggtcaaagagagaaactagtcctgt
aagttgccttctgacttccacatgtgctcttaaacacacacacacacaca
cacacacacacacacacacacacacacacacacacgaacggacggggttg
gggggtgtgtatgtgagagagagagagagatagggaaagagagagaatga
atatacctgagaggcattatctaaaacagaacaaaaggtttgcacctttc
actaaaagctgatataagagctatgagcagtaatcaatatgatacatgag
aagagaaaaaagaatgtaccgtggctcacacctgcagtcccagcgcagaa
aagctaaagcagggggattactgagtttcagacttgtctgcattacactg
tgaaactctatcttaaataaaacaagagatggagaaccgcctttcataag
tgaaccacttggacagagtctcaggaaggacaagtaccatgggagttcag
ggatggaaagaaagggtctttcccagaagtgtctgatgctgttattgatg
cttcttcaggaatgtggatttcaaagtggctggaagaaagccacttcctt
tcatctgcctcttatttattctaagggacctgtttcgaaaccttcaccac
aagtagttagatggaaaaatgtggctcccca
actgaactgctcacgccctggccagtgtgcctctggctttggctatatct
gctgacttttcatactatatctgcctgacttttcttcctttccaaatggg
aagttttctgctgatgttctccagcatcttgggtgaatcatcctgtaact
ctccaggccctgctttaagatttcctgcaagacttatccctagagcatcc
attccctgcttgcagagtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_12870191_12871229
seq2: B6Ng01-145N22.b_45_1075 (reverse)

seq1  TGGGGAG-CACATTTAT-CATCTAACTTACTTTGTGGCTGAAGTGTTTCG  48
      ||||||| ||||||| | |||||||| ||| |||||| ||||| ||||||
seq2  TGGGGAGCCACATTTTTCCATCTAAC-TAC-TTGTGG-TGAAG-GTTTCG  46

seq1  -AACAGGTTCCTTTAGAAT-AATAAGAGGCAGATGAAAGGGAGGTGGCTT  96
       |||||| ||| ||||||| |||||||||||||||||| ||| |||||||
seq2  AAACAGG-TCCCTTAGAATAAATAAGAGGCAGATGAAA-GGAAGTGGCTT  94

seq1  TCTTTCCAGCCACTTTGAAATTCAACATTACCTGAAGAAGCATCAATAAA  146
      || ||||||||||||||||| || ||||| ||||||||||||||||| ||
seq2  TC-TTCCAGCCACTTTGAAA-TCCACATT-CCTGAAGAAGCATCAAT-AA  140

seq1  CAGCATCAGACACTTACTGGGAAAGACCCTTTCTTTCCATCCCTGAACT-  195
      ||||||||||||||| ||||||||||||||||||||||||||||||||| 
seq2  CAGCATCAGACACTT-CTGGGAAAGACCCTTTCTTTCCATCCCTGAACTC  189

seq1  CCATGGTAACTTGTCCTTCCTGAGACTCTGTCCAAGTTGGTTCACTTATG  245
      ||||||| |||||||||||||||||||||||||||| |||||||||||||
seq2  CCATGGT-ACTTGTCCTTCCTGAGACTCTGTCCAAG-TGGTTCACTTATG  237

seq1  AAAGGCGGTTCTCCATCTCTTGTTTTATTTAAGATAGAGTTTCACAGTGT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCGGTTCTCCATCTCTTGTTTTATTTAAGATAGAGTTTCACAGTGT  287

seq1  AATGCAGACAAGTCTGAAACTCAGTAATCCCCCTGCTTTAGCTTTTCTGC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAGACAAGTCTGAAACTCAGTAATCCCCCTGCTTTAGCTTTTCTGC  337

seq1  GCTGGGACTGCAGGTGTGAGCCACGGTACATTCTTTTTTCTCTTCTCATG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGACTGCAGGTGTGAGCCACGGTACATTCTTTTTTCTCTTCTCATG  387

seq1  TATCATATTGATTACTGCTCATAGCTCTTATATCAGCTTTTAGTGAAAGG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATATTGATTACTGCTCATAGCTCTTATATCAGCTTTTAGTGAAAGG  437

seq1  TGCAAACCTTTTGTTCTGTTTTAGATAATGCCTCTCAGGTATATTCATTC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACCTTTTGTTCTGTTTTAGATAATGCCTCTCAGGTATATTCATTC  487

seq1  TCTCTCTTTCCCTATCTCTCTCTCTCTCTCACATACACACCCCCCAACCC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTTTCCCTATCTCTCTCTCTCTCTCACATACACACCCCCCAACCC  537

seq1  CGTCCGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCGTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  587

seq1  TGTGTGTGTGTTTAAGAGCACATGTGGAAGTCAGAAGGCAACTTACAGGA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTTTAAGAGCACATGTGGAAGTCAGAAGGCAACTTACAGGA  637

seq1  CTAGTTTCTCTCTTTGACCATGATCCTTAGTTTTTTTTATCTGACGTTGT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTCTCTCTTTGACCATGATCCTTAGTTTTTTTTATCTGACGTTGT  687

seq1  CAAGCTTGGCCAAGGCAAGTGCCTTTACCCACTGAGCCATGCTCCTCTCT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTTGGCCAAGGCAAGTGCCTTTACCCACTGAGCCATGCTCCTCTCT  737

seq1  GCAACTGACAGAGGCTGGAATGCCTTTGACAACAGTGACAGCTCACTCTC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTGACAGAGGCTGGAATGCCTTTGACAACAGTGACAGCTCACTCTC  787

seq1  AAGCAATTTCCACCTGGCTGTTAACCCATTGTTTTCTGACCTTACCTTCC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATTTCCACCTGGCTGTTAACCCATTGTTTTCTGACCTTACCTTCC  837

seq1  AACAAGATGCTTTTTAAATAGCTGGCTGTTACCTCCCACCCTCCTTCAAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGATGCTTTTTAAATAGCTGGCTGTTACCTCCCACCCTCCTTCAAA  887

seq1  GCCACTGTGAGCAACCAGGCCCTGTTCTGGGGGGCGGGAGTGGGGGTGGG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTGTGAGCAACCAGGCCCTGTTCTGGGGGGCGGGAGTGGGGGTGGG  937

seq1  TAGGTGAGTGGGTGCTGTTTGTATAGGAAAGGATACTTTGTAAAATGCTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGAGTGGGTGCTGTTTGTATAGGAAAGGATACTTTGTAAAATGCTT  987

seq1  TGAATATTGATTTAGATGCATGCCTCACCAAACTATTTGAATTC  1039
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATTGATTTAGATGCATGCCTCACCAAACTATTTGAATTC  1031

seq1: chr14_12738348_12738597
seq2: B6Ng01-145N22.g_74_323

seq1  ACTGAACTGCTCACGCCCTGGCCAGTGTGCCTCTGGCTTTGGCTATATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAACTGCTCACGCCCTGGCCAGTGTGCCTCTGGCTTTGGCTATATCT  50

seq1  GCTGACTTTTCATACTATATCTGCCTGACTTTTCTTCCTTTCCAAATGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTTTTCATACTATATCTGCCTGACTTTTCTTCCTTTCCAAATGGG  100

seq1  AAGTTTTCTGCTGATGTTCTCCAGCATCTTGGGTGAATCATCCTGTAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTCTGCTGATGTTCTCCAGCATCTTGGGTGAATCATCCTGTAACT  150

seq1  CTCCAGGCCCTGCTTTAAGATTTCCTGCAAGACTTATCCCTAGAGCATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGCCCTGCTTTAAGATTTCCTGCAAGACTTATCCCTAGAGCATCC  200

seq1  ATTCCCTGCTTGCAGAGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTGCTTGCAGAGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  250