BAC Information

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BAC

Clone NameB6Ng01-145N24
Chromosome14 (Build37)
Map Location 110,363,250 - 110,363,978
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC640892
Downstream geneSlitrk6, EG668772
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145N24.bB6Ng01-145N24.g
ACCDH943162DH943163
length1,0371,072
definitionDH943162|Mus musculus domesticus DNA, BAC clone: B6Ng01-145N24, 5' end.DH943163|Mus musculus domesticus DNA, BAC clone: B6Ng01-145N24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaaggaatctacagcaaacca
gtagccaacatcaaagtaaatggtgagaagctggaagcaatcccactaaa
atcagggactagacaaggctgtccactctcgccctacctattcaacattg
tacttgaagtcctagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcaatttttgcagataatat
gacagtatatataagtgaccctaaaaattccaccagagaagtcctaaacc
tcataaacagctttggtgaagtagctggatataaaattaactcaaacatg
tcaatggcctttctgtacacaaaaaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatctcagca
tgactctaaggaagtgaaagatctgtatgataaaaacttcaaatctctga
agaaagaaattaaagaagatctcagaagatggaaagatctcccatgctca
tggattggcaggatcaacattgtaaaaatggctatcttgccaaaagcaat
ctacagattcaatgcaatccccatcaaaattccaactcaattcttcaacg
aattagaaggagcaatttgcaaattcatctggaataacaaaaaacctagg
atagcaaaaactcttctcaaggataaaagaacctctggtggaatcaccat
gcctgacctaaagcttaactacagagcaattgtgataaaaactgcatggt
actggtatagagacagaccagtagaccaatggaatagaattgaagaccca
gaaatgaacccacacacctatggtcacttgattcttcgacaagggagcta
aaccatccagtggaagaaagacagcattttccaacaatttggtgctggca
caactggttgttatccatgtagaagattgcgatccgattccatacttatc
ctccttgtactaaggtcaattctacgtggtatccagg
gaattccctttatttatatggcttgaaacattgttcaccttgatatctgt
gttgatgatgtaatggcagtaaaggaaccttgtaacaccaatgaaaaaaa
aatgattagaagcaagcacttggaaaagtaaagccagtactgcattaata
aatattcttccttttgagaattaacttgtcatcacaagctaattcatgct
tatatgttcaagtaaacacactcacatggagaaatttaacaatatagtgt
aatcacgggccttttatttcatgtgggaagccgccctcacatttgccatt
gtaagatggcactgacagctgtgttctaagtggtaaacataatctgcaca
cgtgcaggggcagttttcccgccatgtgttctgcctttctcgtgatgaca
actgggccgatgggctgcagccaatcagggagtaatacgtcctaggcgga
ggataattctccttaaaagggacggggttttgccattctttctcttgctt
tcttgttcttgttctttttcttgctttcttgctctctcttgctcttgctc
ttgctctcgctctcttgctctctggctcgtgaagatgtaagcaataaagc
tttgccgcagaagattccggtttgttgcgttcttcctggccggtcgcgag
aacgagtgtaagagttggtgctgaaacccgggacgagaagacccgggacg
agaagacctgggacgagaaaaccagggacagttaccatcaccggcgcaag
gaagatccctcattccggaaccagaactgcgggtcatggtcataaaggtt
cccgtaaaacagactgttgagaaggattcaactgcgtgaattcagaactc
ttcagctggggaacgtggtaatgaagtgttcccgcaacacagactgtgag
agattcaactgcgtgaattcagaactcttcagctgggacaggatactcgt
aagtatagctttacaaggtaagtctgccttgactttctatgaaatcagaa
agtctatcagagtaagtggaaatagcttacagtaccttctggcctgactt
ctacgaatcaggacagtctatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_110363250_110363978
seq2: B6Ng01-145N24.g_480_1137 (reverse)

seq1  GATAGACTGTCTTGAATTTCGTTAGAAAGTTCAAGGCCAG-ATGTACCTT  49
      ||||||||||| |||  |||| ||| ||||   ||||||| | ||||  |
seq2  GATAGACTGTCCTGA--TTCG-TAG-AAGT--CAGGCCAGAAGGTAC--T  42

seq1  GTAAAGCTATTTCCCACTTTACTTCTGATAGACTGTCTTGAATTTCGTTA  99
      || ||||||||| |||| |||| ||||||||||| |||   |||||  ||
seq2  GT-AAGCTATTT-CCAC-TTAC-TCTGATAGACTTTCT--GATTTC-ATA  85

seq1  GAAAGTTCAAGGCCAGACTTACCTTGTAAAGCTATACTTACGGGTACCCT  149
      ||||| |||||| ||||||||||||||||||||||||||||| ||| |||
seq2  GAAAG-TCAAGG-CAGACTTACCTTGTAAAGCTATACTTACGAGTATCCT  133

seq1  GTTCCCCAGCTGAAGAGTTCTGAATTCACGCAGTTGAATCCTTCTCAACA  199
      ||  ||||||||||||||||||||||||||||||||||||  |||| |||
seq2  GT--CCCAGCTGAAGAGTTCTGAATTCACGCAGTTGAATC--TCTC-ACA  178

seq1  GTCTGTGTTGCGGGAACACTTCATTACCACCATTCCCCAGCTGAAGAGTT  249
      ||||||||||||||||||||||||||||| | ||||||||||||||||||
seq2  GTCTGTGTTGCGGGAACACTTCATTACCA-CGTTCCCCAGCTGAAGAGTT  227

seq1  CTGAATTCACGCAGTTGAATCCTTCTCAACAGTCTGTTTTACGGGAACAC  299
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTGAATTCACGCAGTTGAATCCTTCTCAACAGTCTGTTTTACGGGAAC-C  276

seq1  TTCATTACCATGACCCGCAGTTCTGGTTCCAGAATGAGGGATCTTCCTTG  349
      || || |||||||||||||||||||||||| |||||||||||||||||||
seq2  TTTATGACCATGACCCGCAGTTCTGGTTCCGGAATGAGGGATCTTCCTTG  326

seq1  CGCCGGTGATGGTAACCGTCCCAGGTTTTCTCATCCCAGGATTTCTCGTC  399
      |||||||||||||||| ||||| |||                        
seq2  CGCCGGTGATGGTAACTGTCCCTGGT------------------------  352

seq1  CCGGGATTTCTCGTCCCAGGTCTTCTCGTCCCGGGTCTTCTCGTCCCGGG  449
            ||||||||||||||||||||||||||||||||||||||||||||
seq2  ------TTTCTCGTCCCAGGTCTTCTCGTCCCGGGTCTTCTCGTCCCGGG  396

seq1  TCTCAGCACCAACTCTTACACGCGTTCTCGTGACCAGCCAGGAAGAACGC  499
      | ||||||||||||||||||| |||||||| |||| ||||||||||||||
seq2  TTTCAGCACCAACTCTTACACTCGTTCTCGCGACCGGCCAGGAAGAACGC  446

seq1  AACAAACCAGAATCTTCTGCGGCAAAACTTTATTGCTTACATCTTCAGGA  549
      |||||||| ||||||||||||||||| |||||||||||||||||||| ||
seq2  AACAAACCGGAATCTTCTGCGGCAAAGCTTTATTGCTTACATCTTCACGA  496

seq1  GCCAGAGAGCAAGAGAGCAAGAGAGCAAGAGAGCAAGAGAACAAGAGAGC  599
      ||||||||||||||||||  |||||||  ||||||||||  ||||     
seq2  GCCAGAGAGCAAGAGAGC--GAGAGCA--AGAGCAAGAG--CAAG-----  535

seq1  AAGAGAGAAAGAGAGCAAGAGAGAGAAAAAGAACAAGAACAAGAAAGCAA  649
       |||||| |||| ||||      |||||||||||||||||||||||||||
seq2  -AGAGAGCAAGAAAGCA------AGAAAAAGAACAAGAACAAGAAAGCAA  578

seq1  GAGAGAGAATGGCAAAACCCCGTCCCTTTTAAGGAGAATTATCCTCCGCC  699
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGAATGGCAAAACCCCGTCCCTTTTAAGGAGAATTATCCTCCGCC  628

seq1  TAGGACGTATTACTCCCTGATTGGCTGCAG  729
      ||||||||||||||||||||||||||||||
seq2  TAGGACGTATTACTCCCTGATTGGCTGCAG  658