BAC Information

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BAC

Clone NameB6Ng01-145O16
Chromosome14 (Build37)
Map Location 48,876,874 - 49,023,666
singlet/doubletdoublet
Overlap genePeli2
Upstream geneWdhd1, Socs4, LOC670795, C130032J12Rik, Lgals3, Dlg7, LOC666895, Fbxo34, D14Ertd436e, EG625730, LOC100042787, Ktn1, 4930447J18Rik, Map1lc3-ps2, EG624367
Downstream geneLOC100041831, 6720456H20Rik, 4930572G02Rik, Otx2, LOC100041864, LOC666972, Exoc5, 4932432K03Rik, LOC218997, Nat12, 1700011H14Rik, Slc35f4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-145O16.bB6Ng01-145O16.g
ACCDH943194DH943195
length9111,089
definitionDH943194|Mus musculus domesticus DNA, BAC clone: B6Ng01-145O16, 5' end.DH943195|Mus musculus domesticus DNA, BAC clone: B6Ng01-145O16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(49,022,757 - 49,023,666)(48,876,874 - 48,877,969)
sequence
gaattctggactgttgcgaacggcccagtgtgggtgctaggaatcaaact
tgagtgttctggaaaaggggaatacattcttacctggtgagccctttctc
catccctctacagtgtcattttatggagcatgaaagatgctattttacat
attttgtgatagcctaggatgtctgcattccactttatttttaatttatt
ctcccaggatttgttgccgttccatcacccccaaagctttggcatgcacg
gacttggagtaaactccacacttcaaaagcccctgtagtgagcctgtgtg
actgctcctggaaggaaacagccttctgaaaagcacaaggaccggattaa
aagaggcctccggtcaggactgtctctcatctgctccactgaagtttcca
aagtttcaggcccacggtgtgtccctttaagctgaatcatgactggtggt
ttctgagaccctttctgtagtcagagccccatcctcactcctagggcggg
ctcaaatggaccaggctgtgtgaaatgttttcatttcccattgactggtt
gtgtatttcccttgtgttaatcccttgttaatggacactttctttgagcc
agctgagattggagttgtgctgtctttgtgactctagcagattttatgac
ttggatatctttgtttttgttattgtgagattttgggattttgtctgttt
catcgatattgattctctcagtgagagatggcctaggctcccacagttct
gtttgtgtttgatctacgaacagtgggagggactcctcagactgcaaatg
ttttccttctctgcttcaactgggaaaggcagagccattagcagctccca
ccactggaaacagatgaatggggctttaaacccagttttgtgtgtgttgg
ggttgtggggt
gaattcacttacatactcattcatcagatacttggcatgtcaaacaaaga
atttccccatggttttaatctgccctgttatgggctgctcctcatcttac
gtgtcaagaagtgactggttggttgattggttggttgattgattgattga
tgattgaattcatgagctgaggggaatggccttgcactacgggggctggt
gctgctgcagttggcagcagtgggctgtcctaggtactcttgacaccagc
tttgtctggacaccagaacacttacgacccaagtgggatttaaagtacgc
ttttactttttaaaatccacttgttggcacttcacagaacggtttccttc
tcttctccttcttaggaaagacaaaattttgtaagcccagaagcaacaag
cgacagtgagattgccatttctgtcccctaccttcccaccatctgtcacc
ttcccttccagtttaaggagccccataagttgtttgtttttatttttttc
aatgtttgcaaatcagactaaacctaaatgtgctgatgagatacacggag
cactgagcggcgtgtctgccgaaatcatttgaaattcctgattttgagag
accaagtgagtgtttactgaggaataattaaatcaggatttcattgagct
gcaatgaccctctctttcagtttcatcttgcattgattaatgatgcctga
atactcgttttccatgcttggtgccaggagtatctgtggctcccagagtg
tcagcatggagagacactgctgagcttggctgtgttccaccccattccca
aaggaggaagtctccagtaaaatcagcgtccgctcaagtggaccgtcagc
agctttgagctgcctgtttagcgtttgtaaatatagatatttatatgatt
atgacatatccatacttgaattggtttttcatatctgcccattagcagat
actattttggctatttttacaattaaacctatgtgactacttttttcctg
aaagcaagcggtatatttaattgctctgtagccgctgctgcctagtttga
ttcatgtggctgcatttaaggagctttaattttcccatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_49022757_49023666
seq2: B6Ng01-145O16.b_49_959 (reverse)

seq1  ACCCCAC-ACCCCAACACACACAAACCTGGGTTTAAAGCCCCATTCATCT  49
      ||||||| ||||||||||||||||| ||||||||||||||||||||||||
seq2  ACCCCACAACCCCAACACACACAAAACTGGGTTTAAAGCCCCATTCATCT  50

seq1  GTTTCCAGTGGTGGGAGCTGCTAATGGCTCTGCCTTTCCCAGTTGAAGCA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCAGTGGTGGGAGCTGCTAATGGCTCTGCCTTTCCCAGTTGAAGCA  100

seq1  GAGAAGGAAAACATTTGCAGTCTGAGGAGTCCCTCCCACTGTTCGTAGAT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGAAAACATTTGCAGTCTGAGGAGTCCCTCCCACTGTTCGTAGAT  150

seq1  CAAACACAAACAGAACTGTGGGAGCCTAGGCCATCTCTCACTGAGAGAAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACAAACAGAACTGTGGGAGCCTAGGCCATCTCTCACTGAGAGAAT  200

seq1  CAATATCGATGAAACAGACAAAATCCCAAAATCTCACAATAACAAAAACA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATCGATGAAACAGACAAAATCCCAAAATCTCACAATAACAAAAACA  250

seq1  AAGATATCCAAGTCATAAAATCTGCTAGAGTCACAAAGACAGCACAACTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATCCAAGTCATAAAATCTGCTAGAGTCACAAAGACAGCACAACTC  300

seq1  CAATCTCAGCTGGCTCAAAGAAAGTGTCCATTAACAAGGGATTAACACAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTCAGCTGGCTCAAAGAAAGTGTCCATTAACAAGGGATTAACACAA  350

seq1  GGGAAATACACAACCAGTCAATGGGAAATGAAAACATTTCACACAGCCTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATACACAACCAGTCAATGGGAAATGAAAACATTTCACACAGCCTG  400

seq1  GTCCATTTGAGCCCGCCCTAGGAGTGAGGATGGGGCTCTGACTACAGAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATTTGAGCCCGCCCTAGGAGTGAGGATGGGGCTCTGACTACAGAAA  450

seq1  GGGTCTCAGAAACCACCAGTCATGATTCAGCTTAAAGGGACACACCGTGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTCAGAAACCACCAGTCATGATTCAGCTTAAAGGGACACACCGTGG  500

seq1  GCCTGAAACTTTGGAAACTTCAGTGGAGCAGATGAGAGACAGTCCTGACC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAAACTTTGGAAACTTCAGTGGAGCAGATGAGAGACAGTCCTGACC  550

seq1  GGAGGCCTCTTTTAATCCGGTCCTTGTGCTTTTCAGAAGGCTGTTTCCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCCTCTTTTAATCCGGTCCTTGTGCTTTTCAGAAGGCTGTTTCCTT  600

seq1  CCAGGAGCAGTCACACAGGCTCACTACAGGGGCTTTTGAAGTGTGGAGTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAGCAGTCACACAGGCTCACTACAGGGGCTTTTGAAGTGTGGAGTT  650

seq1  TACTCCAAGTCCGTGCATGCCAAAGCTTTGGGGGTGATGGAACGGCAACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCAAGTCCGTGCATGCCAAAGCTTTGGGGGTGATGGAACGGCAACA  700

seq1  AATCCTGGGAGAATAAATTAAAAATAAAGTGGAATGCAGACATCCTAGGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTGGGAGAATAAATTAAAAATAAAGTGGAATGCAGACATCCTAGGC  750

seq1  TATCACAAAATATGTAAAATAGCATCTTTCATGCTCCATAAAATGACACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACAAAATATGTAAAATAGCATCTTTCATGCTCCATAAAATGACACT  800

seq1  GTAGAGGGATGGAGAAAGGGCTCACCAGGTAAGAATGTATTCCCCTTTTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGGGATGGAGAAAGGGCTCACCAGGTAAGAATGTATTCCCCTTTTC  850

seq1  CAGAACACTCAAGTTTGATTCCTAGCACCCACACTGGGCCGTTCGCAACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACACTCAAGTTTGATTCCTAGCACCCACACTGGGCCGTTCGCAACA  900

seq1  GTCCAGAATTC  910
      |||||||||||
seq2  GTCCAGAATTC  911

seq1: chr14_48876874_48877969
seq2: B6Ng01-145O16.g_67_1155

seq1  GAATTCACTTACATACTCATTCATCAGATACTTGGCATGTCAAACAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTACATACTCATTCATCAGATACTTGGCATGTCAAACAAAGA  50

seq1  ATTTCCCCATGGTTTTAATCTGCCCTGTTATGGGCTGCTCCTCATCTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCCATGGTTTTAATCTGCCCTGTTATGGGCTGCTCCTCATCTTAC  100

seq1  GTGTCAAGAAGTGACTGGTTGGTTGATTGGTTGGTTGATTGATTGATTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAAGAAGTGACTGGTTGGTTGATTGGTTGGTTGATTGATTGATTGA  150

seq1  TGATTGAATTCATGAGCTGAGGGGAATGGCCTTGCACTACGGGGGCTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGAATTCATGAGCTGAGGGGAATGGCCTTGCACTACGGGGGCTGGT  200

seq1  GCTGCTGCAGTTGGCAGCAGTGGGCTGTCCTAGGTACTCTTGACACCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGCAGTTGGCAGCAGTGGGCTGTCCTAGGTACTCTTGACACCAGC  250

seq1  TTTGTCTGGACACCAGAACACTTACGACCCAAGTGGGATTTAAAGTACGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTGGACACCAGAACACTTACGACCCAAGTGGGATTTAAAGTACGC  300

seq1  TTTTACTTTTTAAAATCCACTTGTTGGCACTTCACAGAACGGTTTCCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTTTTTAAAATCCACTTGTTGGCACTTCACAGAACGGTTTCCTTC  350

seq1  TCTTCTCCTTCTTAGGAAAGACAAAATTTTGTAAGCCCAGAAGCAACAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCCTTCTTAGGAAAGACAAAATTTTGTAAGCCCAGAAGCAACAAG  400

seq1  CGACAGTGAGATTGCCATTTCTGTCCCCTACCTTCCCACCATCTGTCACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACAGTGAGATTGCCATTTCTGTCCCCTACCTTCCCACCATCTGTCACC  450

seq1  TTCCCTTCCAGTTTAAGGAGCCCCATAAGTTGTTTGTTTTTATTTTTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTCCAGTTTAAGGAGCCCCATAAGTTGTTTGTTTTTATTTTTTTC  500

seq1  AATGTTTGCAAATCAGACTAAACCTAAATGTGCTGATGAGATACACGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTGCAAATCAGACTAAACCTAAATGTGCTGATGAGATACACGGAG  550

seq1  CACTGAGCGGCGTGTCTGCCGAAATCATTTGAAATTCCTGATTTTGAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGCGGCGTGTCTGCCGAAATCATTTGAAATTCCTGATTTTGAGAG  600

seq1  ACCAAGTGAGTGTTTACTGAGGAATAATTAAATCAGGATTTCATTGAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGTGAGTGTTTACTGAGGAATAATTAAATCAGGATTTCATTGAGCT  650

seq1  GCAATGACCCTCTCTTTCAGTTTCATCTTGCATTGATTAATGATGCCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGACCCTCTCTTTCAGTTTCATCTTGCATTGATTAATGATGCCTGA  700

seq1  ATACTCGTTTTCCATGCTTGGTGCCAGGAGTATCTGTGGCTCCCAGAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCGTTTTCCATGCTTGGTGCCAGGAGTATCTGTGGCTCCCAGAGTG  750

seq1  TCAGCATGGAGAGACACTGCTGAGCTTGGCTGTGTTCCACCCCATTCCC-  799
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TCAGCATGGAGAGACACTGCTGAGCTTGGCTGTGTTCCACCCCATTCCCA  800

seq1  AAGGAGGAAGTCTCCAGTAAAATCAGCGTCCGCTCAGGTGGACCGTCAGC  849
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAGGAGGAAGTCTCCAGTAAAATCAGCGTCCGCTCAAGTGGACCGTCAGC  850

seq1  AGCTTTGAGCTGCCTGTTTTAGCGTTTGTAAATATAGATAATTTATATGA  899
      |||||||||||||||| |||||||||||||||||||||| ||||||||||
seq2  AGCTTTGAGCTGCCTG-TTTAGCGTTTGTAAATATAGAT-ATTTATATGA  898

seq1  TTATGACATATCCATACTTGAATTGGTTTTTCCATATCTTGCCCATTAGC  949
      ||||||||||||||||||||||||||||||| |||||| |||||||||||
seq2  TTATGACATATCCATACTTGAATTGGTTTTT-CATATC-TGCCCATTAGC  946

seq1  AGATACTATTTTGCCTATTTTCACAAATTAAACCTATGTGACTACTTTTT  999
      ||||||||||||| ||||||| || |||||||||||||||||||||||||
seq2  AGATACTATTTTGGCTATTTTTAC-AATTAAACCTATGTGACTACTTTTT  995

seq1  TCCTGAAAGCAAAACGGTAATATTAATTGCTCTGTAG-CGCTGCTGCTCA  1048
      |||||||||| || |||||   ||||||||||||||| |||||||||  |
seq2  TCCTGAAAGC-AAGCGGTATATTTAATTGCTCTGTAGCCGCTGCTGCCTA  1044

seq1  GTTTGATTCAGTGT-GCTGTCATTTTAAAAGGAGCTTT-ATTTTCCCATG  1096
      |||||||||| ||| |||| |||||   |||||||||| |||||||||||
seq2  GTTTGATTCA-TGTGGCTG-CATTT---AAGGAGCTTTAATTTTCCCATG  1089