BAC Information

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BAC

Clone NameB6Ng01-146J03
Chromosome14 (Build37)
Map Location 70,887,460 - 71,025,394
singlet/doubletdoublet
Overlap geneBmp1, Sftpc, Lgi3, Reep4, Hr, Nudt18, Rai16, Epb4.9
Upstream geneSlc25a37, D930020E02Rik, Entpd4, Loxl2, R3hcc1, Chmp7, Tnfrsf10b, Rhobtb2, LOC100043701, 1700081D17Rik, LOC668397, Egr3, Bin3, 2610301G19Rik, 9930012K11Rik, Pdlim2, Sorbs3, Ppp3cc, LOC100043115, Slc39a14, EG668450, Piwil2, Polr3d, Phyhip
Downstream geneFgf17, Npm2, Xpo7, LOC668443, Dok2, Gfra2, LOC100043132, LOC100043136
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146J03.bB6Ng01-146J03.g
ACCDH943681DH943682
length1,231854
definitionDH943681|Mus musculus domesticus DNA, BAC clone: B6Ng01-146J03, 5' end.DH943682|Mus musculus domesticus DNA, BAC clone: B6Ng01-146J03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,887,460 - 70,888,698)(71,024,542 - 71,025,394)
sequence
gaattcagacacacatatatgcagagtgtgttcaagcccatcatgtgggc
atttcacgtagagctgctcgcatgctgacaggcacacacaggcacacagt
tacagacttctgtgtgccacaccattgttctaagcccacgtgcctagcat
aggagcaggcactcaggacaagtgtgtggatcccaattacacccagaatt
ccagagatgagccacgaagtgggaagatggctgttggcattccactgaca
aggcagctttgtggtaagtggacagttcctaagctgagggcaggaccctg
agggctgtagccctgactcccagaaggccctatttcatgctcaggtgggc
tagacttgaggtagagttgtcaagccccttgccagaggctcctcctcagg
agagcagagcctgaccgagagagctgccattgtacccgtctgtgagacag
gccctatggtgtgcctctcctgagactctggtaggagctccagggagctc
agctcacgaagtaagccatggcttccctagtatgtttggaccctcgtgcc
ttcttcatgtatgctctcccaaatatctagtccagtgcttgggacacagg
tggggcaaaagaaaactgttaatccaatgagtggatgggtaagtgaaaga
ctaaagtaatgtgtggatgtcagttctgtggatggctgcctgaacatctg
ggagggggctctggcccaccctgaagagtgaacggcccattctgtgactg
gagaagacattgcaggggaccggggcaagggaggtggcacagaccccaac
aaggagatggcactcaccctacagtgcccaaatgccccggaggtgctggg
gtcagactgaaggtcttcaaggttttgcttctccttcttgtcttaggtct
cctcgatgggtgtcccaatagtccatacagcccctcctgagggccagagt
cacatgccccaggccccgaggctgaactctgatgcccatcgatgagaagt
cctctgcaggtttcttgtgcaagggcaatgcatatgtgtgcacgcattgg
tgtatgcatatgttgtgagcacatgtacatgcatgtaatccctgcatggt
gtgaatacctatgtagtagggaaacaaggcaagctcaaaacaaaccactg
gttattcctatatccttctcagactgtgagcactgaaggtcagaatcgat
cagagtagacagtaatggtttctctgaagaa
gaattctttcagagctcacgtgtggggagagtggaatggggacctctcct
gaattctagaatctggatttagggtgggagtttcctctcctccccagatc
tgccgatccagctatatatacctcaggactcagatctataaggaacgtgt
ttggacaaagcaagcctgagcagtggagggacctagctagaaaagagaaa
cttacctcttctgaggaaagagcacagaaatggccactaactcggtcaag
aggggaacctaagaaaactctaatgagctcaggcatgtttgcaggggagg
gaggcaggagggggggtcaaagggaaaggagcactcttgtcactgagagt
gggtaggcaggtcctggaacagacggactccgttatctactcctgaagct
gcctgatcttgttcaatgggacaggtgtcattcagagttggtatgaggaa
tgcatagtccaaagcaataggaaaaggatcagaaagcatttgcatgagcg
agagagagagagagagagagaaagagagagagagagagaaaacaagagaa
gagaaagtaacagggccttggtggcctgagaaaaggccagggataaactt
gacttaagtaaggcttttgatgagccactggcctaagcaggcccaaaccc
tgctgtcccgtgtctcaccccaccctacaatacacacattcactgtagtg
cgcgcccagttcccgccctattgactacaccacccttctcccaccctagg
atgctgttttgggaacgggtgacctagctggagcctgtctttatttctgg
cattgcgttgttgttgccacagcaactgtgcaagtggggctggggagggg
gaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_70887460_70888698
seq2: B6Ng01-146J03.b_50_1280

seq1  GAATTCAGACACACATATATGCAGAGTGTGTTCAAGCCCATCATGTGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGACACACATATATGCAGAGTGTGTTCAAGCCCATCATGTGGGC  50

seq1  ATTTCACGTAGAGCTGCTCGCATGCTGACAGGCACACACAGGCACACAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCACGTAGAGCTGCTCGCATGCTGACAGGCACACACAGGCACACAGT  100

seq1  TACAGACTTCTGTGTGCCACACCATTGTTCTAAGCCCACGTGCCTAGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGACTTCTGTGTGCCACACCATTGTTCTAAGCCCACGTGCCTAGCAT  150

seq1  AGGAGCAGGCACTCAGGACAAGTGTGTGGATCCCAATTACACCCAGAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCAGGCACTCAGGACAAGTGTGTGGATCCCAATTACACCCAGAATT  200

seq1  CCAGAGATGAGCCACGAAGTGGGAAGATGGCTGTTGGCATTCCACTGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGATGAGCCACGAAGTGGGAAGATGGCTGTTGGCATTCCACTGACA  250

seq1  AGGCAGCTTTGTGGTAAGTGGACAGTTCCTAAGCTGAGGGCAGGACCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCTTTGTGGTAAGTGGACAGTTCCTAAGCTGAGGGCAGGACCCTG  300

seq1  AGGGCTGTAGCCCTGACTCCCAGAAGGCCCTATTTCATGCTCAGGTGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTGTAGCCCTGACTCCCAGAAGGCCCTATTTCATGCTCAGGTGGGC  350

seq1  TAGACTTGAGGTAGAGTTGTCAAGCCCCTTGCCAGAGGCTCCTCCTCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTTGAGGTAGAGTTGTCAAGCCCCTTGCCAGAGGCTCCTCCTCAGG  400

seq1  AGAGCAGAGCCTGACCGAGAGAGCTGCCATTGTACCCGTCTGTGAGACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGAGCCTGACCGAGAGAGCTGCCATTGTACCCGTCTGTGAGACAG  450

seq1  GCCCTATGGTGTGCCTCTCCTGAGACTCTGGTAGGAGCTCCAGGGAGCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTATGGTGTGCCTCTCCTGAGACTCTGGTAGGAGCTCCAGGGAGCTC  500

seq1  AGCTCACGAAGTAAGCCATGGCTTCCCTAGTATGTTTGGACCCTCGTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCACGAAGTAAGCCATGGCTTCCCTAGTATGTTTGGACCCTCGTGCC  550

seq1  TTCTTCATGTATGCTCTCCCAAATATCTAGTCCAGTGCTTGGGACACAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCATGTATGCTCTCCCAAATATCTAGTCCAGTGCTTGGGACACAGG  600

seq1  TGGGGCAAAAGAAAACTGTTAATCCAATGAGTGGATGGGTAAGTGAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCAAAAGAAAACTGTTAATCCAATGAGTGGATGGGTAAGTGAAAGA  650

seq1  CTAAAGTAATGTGTGGATGTCAGTTCTGTGGATGGCTGCCTGAACATCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGTAATGTGTGGATGTCAGTTCTGTGGATGGCTGCCTGAACATCTG  700

seq1  GGAGGGGGCTCTGGCCCACCCTGAAGAGTGAACGGCCCATTCTGTGACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGGGCTCTGGCCCACCCTGAAGAGTGAACGGCCCATTCTGTGACTG  750

seq1  GAGAAGACATTGCAGGGGACCGGGGCAAGGGAGGTGGCACAGACCCCAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGACATTGCAGGGGACCGGGGCAAGGGAGGTGGCACAGACCCCAAC  800

seq1  AAGGAGATGGCACTCACCCTACAGTGCCCAAATGCCCCGGAGGTGCTGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGATGGCACTCACCCTACAGTGCCCAAATGCCCCGGAGGTGCTGGG  850

seq1  GTCAGACTGAAGGTCTTCAGGGTCTTGCTTCTCCTTCTTGTCTTAGGGTC  900
      ||||||||||||||||||| ||| ||||||||||||||||||||| ||||
seq2  GTCAGACTGAAGGTCTTCAAGGTTTTGCTTCTCCTTCTTGTCTTA-GGTC  899

seq1  TCCTCGATGGGTGTCCCAATAGTCCATACAGCCCCCTCCTGAGGGCCAGA  950
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCCTCGATGGGTGTCCCAATAGTCCATACAG-CCCCTCCTGAGGGCCAGA  948

seq1  GTCACATGCCCCAGGCCCCGAGGCTGAACTCTGATGCCCATCGATGAG-A  999
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GTCACATGCCCCAGGCCCCGAGGCTGAACTCTGATGCCCATCGATGAGAA  998

seq1  GTCCTCTGCAGGTTTCTTGTGCAAGGGGCAATGCATATTGTGTGCACGCA  1049
      |||||||||||||||||||||||| |||||||||||| ||||||||||||
seq2  GTCCTCTGCAGGTTTCTTGTGCAA-GGGCAATGCATA-TGTGTGCACGCA  1046

seq1  TGTGTGTATGCATATGTTGTGAGCACATGTACATGCATGTACATCCCTTG  1099
      |  |||||||||||||||||||||||||||||||||||||| ||||| ||
seq2  TTGGTGTATGCATATGTTGTGAGCACATGTACATGCATGTA-ATCCC-TG  1094

seq1  CATGGTGTTGAGTA-CTATGTAGTAGGGAGACAAGGCAGAGGCTCCAAAC  1148
      ||||||| ||| || |||||||||||||| |||||||  | |||| ||||
seq2  CATGGTG-TGAATACCTATGTAGTAGGGAAACAAGGC--AAGCTCAAAAC  1141

seq1  AAA-CACCGGTATCCCCCATATCCTCTCCAAGACTG-GAGCAGCAGAAGG  1196
      ||| ||| |||    || ||||||| ||  |||||| ||||| | |||||
seq2  AAACCACTGGTTATTCCTATATCCT-TCTCAGACTGTGAGCA-CTGAAGG  1189

seq1  GCAGAGACAGACAAGAGTAAGCAGGTAATGGTTTCTCT-AAGAA  1239
       |||| |  ||  ||||||  || |||||||||||||| |||||
seq2  TCAGA-ATCGATCAGAGTAGACA-GTAATGGTTTCTCTGAAGAA  1231

seq1: chr14_71024542_71025394
seq2: B6Ng01-146J03.g_67_920 (reverse)

seq1  TCTCCCCCT-CCCAGCCCCACTTGCACAGTTGCTGTGGCAACAACAACGC  49
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCCTCCCCAGCCCCACTTGCACAGTTGCTGTGGCAACAACAACGC  50

seq1  AATGCCAGAAATAAAGACAGGCTCCAGCTAGGTCACCCGTTCCCAAAACA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCAGAAATAAAGACAGGCTCCAGCTAGGTCACCCGTTCCCAAAACA  100

seq1  GCATCCTAGGGTGGGAGAAGGGTGGTGTAGTCAATAGGGCGGGAACTGGG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCTAGGGTGGGAGAAGGGTGGTGTAGTCAATAGGGCGGGAACTGGG  150

seq1  CGCGCACTACAGTGAATGTGTGTATTGTAGGGTGGGGTGAGACACGGGAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGCACTACAGTGAATGTGTGTATTGTAGGGTGGGGTGAGACACGGGAC  200

seq1  AGCAGGGTTTGGGCCTGCTTAGGCCAGTGGCTCATCAAAAGCCTTACTTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGGTTTGGGCCTGCTTAGGCCAGTGGCTCATCAAAAGCCTTACTTA  250

seq1  AGTCAAGTTTATCCCTGGCCTTTTCTCAGGCCACCAAGGCCCTGTTACTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAGTTTATCCCTGGCCTTTTCTCAGGCCACCAAGGCCCTGTTACTT  300

seq1  TCTCTTCTCTTGTTTTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTCTTGTTTTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCT  350

seq1  CTCTCGCTCATGCAAATGCTTTCTGATCCTTTTCCTATTGCTTTGGACTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCGCTCATGCAAATGCTTTCTGATCCTTTTCCTATTGCTTTGGACTA  400

seq1  TGCATTCCTCATACCAACTCTGAATGACACCTGTCCCATTGAACAAGATC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCCTCATACCAACTCTGAATGACACCTGTCCCATTGAACAAGATC  450

seq1  AGGCAGCTTCAGGAGTAGATAACGGAGTCCGTCTGTTCCAGGACCTGCCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCTTCAGGAGTAGATAACGGAGTCCGTCTGTTCCAGGACCTGCCT  500

seq1  ACCCACTCTCAGTGACAAGAGTGCTCCTTTCCCTTTGACCCCCCCTCCTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACTCTCAGTGACAAGAGTGCTCCTTTCCCTTTGACCCCCCCTCCTG  550

seq1  CCTCCCTCCCCTGCAAACATGCCTGAGCTCATTAGAGTTTTCTTAGGTTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTCCCCTGCAAACATGCCTGAGCTCATTAGAGTTTTCTTAGGTTC  600

seq1  CCCTCTTGACCGAGTTAGTGGCCATTTCTGTGCTCTTTCCTCAGAAGAGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTGACCGAGTTAGTGGCCATTTCTGTGCTCTTTCCTCAGAAGAGG  650

seq1  TAAGTTTCTCTTTTCTAGCTAGGTCCCTCCACTGCTCAGGCTTGCTTTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTCTCTTTTCTAGCTAGGTCCCTCCACTGCTCAGGCTTGCTTTGT  700

seq1  CCAAACACGTTCCTTATAGATCTGAGTCCTGAGGTATATATAGCTGGATC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACACGTTCCTTATAGATCTGAGTCCTGAGGTATATATAGCTGGATC  750

seq1  GGCAGATCTGGGGAGGAGAGGAAACTCCCACCCTAAATCCAGATTCTAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGATCTGGGGAGGAGAGGAAACTCCCACCCTAAATCCAGATTCTAGA  800

seq1  ATTCAGGAGAGGTCCCCATTCCACTCTCCCCACACGTGAGCTCTGAAAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGGAGAGGTCCCCATTCCACTCTCCCCACACGTGAGCTCTGAAAGA  850

seq1  ATTC  853
      ||||
seq2  ATTC  854