BAC Information

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BAC

Clone NameB6Ng01-147D10
Chromosome14 (Build37)1 (Build37)
Map Location 68,692,013 - 68,692,04750,280,843 - 50,281,967
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEbf2, EG628416, LOC100043046, LOC100043056, Cdca2, Kctd9, Gnrh1, Dock5
Downstream geneNefl, Nefm, LOC100043072, Adam7, Adamdec1, Adam28, LOC641033, LOC100043082, Stc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147D10.bB6Ng01-147D10.g
ACCDH944157DH944158
length7061,103
definitionDH944157|Mus musculus domesticus DNA, BAC clone: B6Ng01-147D10, 5' end.DH944158|Mus musculus domesticus DNA, BAC clone: B6Ng01-147D10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(68,692,013 - 68,692,047)(50,280,843 - 50,281,967)
sequence
gaattctgtggattgtatcctgggtactctgaacttttctggctattatc
cacttattagtgagtatatactatgcatgttcttttgggtctgagttata
tcactcaacaggatgacattttctagttccattcgtttgcctgaaaaact
catgatgtccttgctcttggtagctgagtcgtattcaattgtgtaaatga
accacacattctgtatccatttttctattgtgggacatctgggttgtttc
cagcttctggatatcacaaataaagcatgatggagatagtagaacatttg
cccctatggcatggtaggatatcttttggatatatccaagagttgttggt
atagctgtgacttctggtagatctatttccagttttctgaggaaccatga
gattgatttccaaagtggttgtatcagcttccaattctaccagcaataaa
ggagtgttcctctttcttcacagcctggacaatatttgctgtcataagag
tgtttgatcttagccgttctgattggtagaaggtagaatcttagggtcat
tttgatttgcatttccctgatcactaaggacttttaacacttctttaagt
gcttctcagccatttgagattcctctgttgtaaattcttaatttagttct
atgctccatattttgattggggttgtttggtttttgttgtttgtttgttt
gttttg
gaattcaagccagatttgatgggatactggaaatcgacataaatcgtaat
ctattatttaaagatccataataaaagtgaagtaattacaagtgcttcat
tgatttatcatgttggatatacaatgtcccaggaataaatatcacatcct
agtcactgtgacattcaaagccataagttttggctctgtagatgacacaa
tcaggagagaaatgacaaccaaataatgctaaggaaccatggataatgga
aggcaatgattgcattcttctgtaatttgttattcacaaaattgcttagt
agtactgaatacataaatcaaattgcttatggttgtagtgtctttttctc
cccaattaaatttgtgttagttaaaaaattctgttttcttccagcagtca
taagtcactcatgaatttgtcttcttcaggacccacattcattctgcaat
aaagtctgagactagctgaatgacaccctgtattcctggaaattgttctt
ttctatgagagacaaaaaaggaatggacatggcaggaaagtaaaaagaaa
ctgggaagagtagagggttgaaaaactataatcaaatatattgtaagaaa
aaaatctattttcaataaatgaaaataggtcgaaagaaagaactgaaaaa
taatatagctgatcatgttccacactccccaccctgtctgctttcccaca
gagttccctccctcccttccctcttgtgattgctatcttctccttcccaa
atgggactgaggcatcctcacttgggcccatcagcttgttgacctttttg
agttctgtagactgtatcttggaaattctgtactattttttttttttggc
taacatccaactattagtaaagtcacccatgcatgtccttttggatccga
gttactcactcagatgatattttctagtccatccatttcccagtaaaact
catgatgcccttgttctatagtcattgtggtaaatgaacacatttttctc
tattattctctaatgtaagaaatctgggttgtcagcttctgctatcacaa
caaggaccactatgacatatgggacaatgccctggtgtgggtatctttgt
ata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_68692013_68692047
seq2: B6Ng01-147D10.b_719_752 (reverse)

seq1  CAAAACAAAACAAACAAACAACAAAAACCAAACAA  35
      |||||| ||||||||||||||||||||||||||||
seq2  CAAAAC-AAACAAACAAACAACAAAAACCAAACAA  34

seq1: chr1_50280843_50281967
seq2: B6Ng01-147D10.g_69_1171

seq1  GAATTCAAGCCAGATTTGATGGGATACTGGAAATCGACATAAATCGTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGCCAGATTTGATGGGATACTGGAAATCGACATAAATCGTAAT  50

seq1  CTATTATTTAAAGATCCATAATAAAAGTGAAGTAATTACAAGTGCTTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTATTTAAAGATCCATAATAAAAGTGAAGTAATTACAAGTGCTTCAT  100

seq1  TGATTTATCATGTTGGATATACAATGTCCCAGGAATAAATATCACATCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTATCATGTTGGATATACAATGTCCCAGGAATAAATATCACATCCT  150

seq1  AGTCACTGTGACATTCAAAGCCATAAGTTTTGGCTCTGTAGATGACACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTGTGACATTCAAAGCCATAAGTTTTGGCTCTGTAGATGACACAA  200

seq1  TCAGGAGAGAAATGACAACCAAATAATGCTAAGGAACCATGGATAATGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAGAGAAATGACAACCAAATAATGCTAAGGAACCATGGATAATGGA  250

seq1  AGGCAATGATTGCATTCTTCTGTAATTTGTTATTCACAAAATTGCTTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAATGATTGCATTCTTCTGTAATTTGTTATTCACAAAATTGCTTAGT  300

seq1  AGTACTGAATACATAAATCAAATTGCTTATGGTTGTAGTGTCTTTTTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTGAATACATAAATCAAATTGCTTATGGTTGTAGTGTCTTTTTCTC  350

seq1  CCCAATTAAATTTGTGTTAGTTAAAAAATTCTGTTTTCTTCCAGCAGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATTAAATTTGTGTTAGTTAAAAAATTCTGTTTTCTTCCAGCAGTCA  400

seq1  TAAGTCACTCATGAATTTGTCTTCTTCAGGACCCACATTCATTCTGCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCACTCATGAATTTGTCTTCTTCAGGACCCACATTCATTCTGCAAT  450

seq1  AAAGTCTGAGACTAGCTGAATGACACCCTGTATTCCTGGAAATTGTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTGAGACTAGCTGAATGACACCCTGTATTCCTGGAAATTGTTCTT  500

seq1  TTCTATGAGAGACAAAAAAGGAATGGACATGGCAGGAAAGTAAAAAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGAGAGACAAAAAAGGAATGGACATGGCAGGAAAGTAAAAAGAAA  550

seq1  CTGGGAAGAGTAGAGGGTTGAAAAACTATAATCAAATATATTGTAAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAAGAGTAGAGGGTTGAAAAACTATAATCAAATATATTGTAAGAAA  600

seq1  AAAATCTATTTTCAATAAATGAAAATAGGTCGAAAGAAAGAACTGAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTATTTTCAATAAATGAAAATAGGTCGAAAGAAAGAACTGAAAAA  650

seq1  TAATATAGCTGATCATGTTCCACACTCCCCACCCTGTCTGCTTTCCCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATAGCTGATCATGTTCCACACTCCCCACCCTGTCTGCTTTCCCACA  700

seq1  GAGTTCCCTCCCTCCCTTCCCTCTTGTGATTGCTATCTTCTCCTTCCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCCTCCCTCCCTTCCCTCTTGTGATTGCTATCTTCTCCTTCCCAA  750

seq1  ATGGGACTGAGGCATCCTCACTTGGGCCCATCAGCTTGTTGACCTTTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGACTGAGGCATCCTCACTTGGGCCCATCAGCTTGTTGACCTTTTTG  800

seq1  AGTTCTGTAGACTGTATCTTGGAAATTCTGTACTATTTTTTTTTTTTTGG  850
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGTTCTGTAGACTGTATCTTGGAAATTCTGTACTA-TTTTTTTTTTTTGG  849

seq1  CTAACATCCAACTATTAGTAAGTACACACCATGCATGTCCTTTTGGATCC  900
      |||||||||||||||||||||   ||| ||||||||||||||||||||||
seq2  CTAACATCCAACTATTAGTAAAGTCAC-CCATGCATGTCCTTTTGGATCC  898

seq1  GAGTTACCTCACTCAGGATGATATTTTCTAGTTCCATCCATTTTCCCAGT  950
      |||||| |||||||| ||||||||||||||| |||||||| |||||||||
seq2  GAGTTA-CTCACTCA-GATGATATTTTCTAG-TCCATCCA-TTTCCCAGT  944

seq1  AAAACTCATGATGCCCTTGTTCTTAATAGTTCCATTGT-GTAAATGAACC  999
      |||||||||||||||||||||||  |||||  |||||| ||||||||| |
seq2  AAAACTCATGATGCCCTTGTTCT--ATAGT--CATTGTGGTAAATGAA-C  989

seq1  ACA-TTTTCTCTATCTATTCCTCTAATGTAGGAAATCTGGGTTGTTTCCA  1048
      ||| |||||||||| |||| |||||||||| ||||||||||||||   ||
seq2  ACATTTTTCTCTAT-TATT-CTCTAATGTAAGAAATCTGGGTTGT---CA  1034

seq1  GCTTCTGGCTATCACAAACAAGACCACTATGAACATAGTGGGACACATGC  1098
      |||||| ||||||||||  | |||||||||| ||||| ||||||| ||||
seq2  GCTTCT-GCTATCACAACAAGGACCACTATG-ACATA-TGGGACA-ATGC  1080

seq1  CCCTGTGTGGGTCATCTTTTGGGTATA  1125
      ||  |||||||| ||||||   |||||
seq2  CCTGGTGTGGGT-ATCTTT---GTATA  1103