BAC Information

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BAC

Clone NameB6Ng01-147G02
Chromosome14 (Build37)
Map Location 37,655,549 - 37,802,244
singlet/doubletdoublet
Overlap geneGcap14
Upstream geneLOC665933, 4930474N05Rik
Downstream geneLOC100040341, LOC670331, Rgr, Lrrc21, Lrrc22, Pcdh21, 2610528A11Rik, Ghitm, LOC382871, LOC382872
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147G02.bB6Ng01-147G02.g
ACCDH944279DH944280
length1291,128
definitionDH944279|Mus musculus domesticus DNA, BAC clone: B6Ng01-147G02, 5' end.DH944280|Mus musculus domesticus DNA, BAC clone: B6Ng01-147G02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,802,116 - 37,802,244)(37,655,549 - 37,656,671)
sequence
gaattcatgcttatgtgtgtacagacacacatgtatgtggttgtgcatgc
acacatgtgttccagaaattaactttgggtgggtatgtatgcatgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattctggatataggacacagaattcaagctgaaacttagcttgaattt
tcttccctattggctaccattcacaggttttttttatgatttttaaacac
atttcacacgtatttgtgtgtacttaaatgtctgtatgtgcaccacgtat
gtacaagtacctatagaggcgagaagaacgtatcatatacactggaatca
aatcagaggcaattgtgtgctatccagtactgtgggctgggaatcaaact
agggtacaatgcaaaaccaaaatgttccttactactgaaccacgactttt
tttttaatgtatcagtttaaaaatgagcccagaagctagggattgacttt
aatgttgaagcacaagtttaatatgtgcaaagccttgatccaatattcag
aatctaattaattaattcatttttaatgatggtcttttcataaacctgac
cctgggtcagctgaataaacactttcaatctactttctacccctcactaa
aaaaaaaaaaaaaaatcaagcacatggtactgaaggtttaacgagaaaca
taaaacaactggattaaaggaagtgatgtgggaagagggaataacgatac
aggaagattaaatcaataaggtcccaaaagcactaactacaaaggaagca
attaccaggtgagacctgattaaaactggggattctggtctgttaaaaga
gaatgaaaaatcaatttacaaatagaaaatatttacaatctacagatgta
gtttgagagactaagagattcagactttaaaaaaaaacttaggataagag
aaggcactgtgcaggtctctcacacacaagctagaccagtgcccaataaa
cacatgagaatgggactgggcttcaccagtcattagaaattgtatatcaa
aaccacaatgaaccatcatcattatacccataatcaccagaatattttaa
cttaaaacgctggcagctcaagcctttgttaagtgtgacagttggaacat
ccataatatgtttaaataaaacatggttcataagattaccaccctcgggg
ataacacttggcttcttttgaagcaagagtattttttattgcccttactt
aggaagaaatcccattcatggtttagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_37802116_37802244
seq2: B6Ng01-147G02.b_41_169 (reverse)

seq1  CACACACACACACACACACACACACACACACACACATGCATACATACCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACATGCATACATACCCA  50

seq1  CCCAAAGTTAATTTCTGGAACACATGTGTGCATGCACAACCACATACATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAGTTAATTTCTGGAACACATGTGTGCATGCACAACCACATACATG  100

seq1  TGTGTCTGTACACACATAAGCATGAATTC  129
      |||||||||||||||||||||||||||||
seq2  TGTGTCTGTACACACATAAGCATGAATTC  129

seq1: chr14_37655549_37656671
seq2: B6Ng01-147G02.g_71_1198

seq1  GAATTCTGGATATAGGACACAGAATTCAAGCTGAAACTTAGCTTGAATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGATATAGGACACAGAATTCAAGCTGAAACTTAGCTTGAATTT  50

seq1  TCTTCCCTATTGGCTACCATTCACAGGTTTTTTTTATGATTTTTAAACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCTATTGGCTACCATTCACAGGTTTTTTTTATGATTTTTAAACAC  100

seq1  ATTTCACACGTATTTGTGTGTACTTAAATGTCTGTATGTGCACCACGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCACACGTATTTGTGTGTACTTAAATGTCTGTATGTGCACCACGTAT  150

seq1  GTACAAGTACCTATAGAGGCGAGAAGAACGTATCATATACACTGGAATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAGTACCTATAGAGGCGAGAAGAACGTATCATATACACTGGAATCA  200

seq1  AATCAGAGGCAATTGTGTGCTATCCAGTACTGTGGGCTGGGAATCAAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGAGGCAATTGTGTGCTATCCAGTACTGTGGGCTGGGAATCAAACT  250

seq1  AGGGTACAATGCAAAACCAAAATGTTCCTTACTACTGAACCACGACTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTACAATGCAAAACCAAAATGTTCCTTACTACTGAACCACGACTTTT  300

seq1  TTTTTAATGTATCAGTTTAAAAATGAGCCCAGAAGCTAGGGATTGACTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATGTATCAGTTTAAAAATGAGCCCAGAAGCTAGGGATTGACTTT  350

seq1  AATGTTGAAGCACAAGTTTAATATGTGCAAAGCCTTGATCCAATATTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGAAGCACAAGTTTAATATGTGCAAAGCCTTGATCCAATATTCAG  400

seq1  AATCTAATTAATTAATTCATTTTTAATGATGGTCTTTTCATAAACCTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAATTAATTAATTCATTTTTAATGATGGTCTTTTCATAAACCTGAC  450

seq1  CCTGGGTCAGCTGAATAAACACTTTCAATCTACTTTCTACCCCTCACTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGTCAGCTGAATAAACACTTTCAATCTACTTTCTACCCCTCACTAA  500

seq1  AAAAAAAAAAAAAAATCAAGCACATGGTACTGAAGGTTTAACGAGAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAATCAAGCACATGGTACTGAAGGTTTAACGAGAAACA  550

seq1  TAAAACAACTGGATTAAAGGAAGTGATGTGGGAAGAGGGAATAACGATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAACTGGATTAAAGGAAGTGATGTGGGAAGAGGGAATAACGATAC  600

seq1  AGGAAGATTAAATCAATAAGGTCCCAAAAGCACTAACTACAAAGGAAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGATTAAATCAATAAGGTCCCAAAAGCACTAACTACAAAGGAAGCA  650

seq1  ATTACCAGGTGAGACCTGATTAAAACTGGGGATTCTGGTCTGTTAAAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCAGGTGAGACCTGATTAAAACTGGGGATTCTGGTCTGTTAAAAGA  700

seq1  GAATGAAAAATCAATTTACAAATAGAAAATATTTACAATCTACAGATGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAAAAATCAATTTACAAATAGAAAATATTTACAATCTACAGATGTA  750

seq1  GTTTGAGAGACTAAGAGATTCAGACTTTAAAAAAAAACTTAGGATAAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGAGACTAAGAGATTCAGACTTTAAAAAAAAACTTAGGATAAGAG  800

seq1  AAGGCACTGTGCAGGTCTCTCACACACAAGCTAGACCAGTGCCCAATAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCACTGTGCAGGTCTCTCACACACAAGCTAGACCAGTGCCCAATAAA  850

seq1  CACATGAGAAT-GGACTGTGCTTCACCAGTCATTAAGAAATTGTATATCA  899
      ||||||||||| |||||| ||||||||||||||| |||||||||||||||
seq2  CACATGAGAATGGGACTGGGCTTCACCAGTCATT-AGAAATTGTATATCA  899

seq1  AAACCACAATGAACCATCATCA-TATACCCATACCCACCAGAATATCTAA  948
      |||||||||||||||||||||| ||||||||||  ||||||||||| | |
seq2  AAACCACAATGAACCATCATCATTATACCCATAATCACCAGAATATTTTA  949

seq1  ACTTAAAAAGGCTGGCAGCTCCAAGCTTTGTTAAGTGTGACAGTTGGAAC  998
      |||| |||| ||||||||||| |  |||||||||||||||||||||||||
seq2  ACTT-AAAACGCTGGCAGCTCAAGCCTTTGTTAAGTGTGACAGTTGGAAC  998

seq1  ACTCAT-ATATGTTTAAATAAAACATGGTTCAATAGATT--CACACACTG  1045
      |  ||| |||||||||||||||||||||||||  |||||  ||| | | |
seq2  ATCCATAATATGTTTAAATAAAACATGGTTCATAAGATTACCACCCTCGG  1048

seq1  GGATAACACTTGGCTTCTTTTGAAGCAGAAGTATTTAT--ATGCACTTAC  1093
      |||||||||||||||||||||||||||  ||||||| |   ||| |||||
seq2  GGATAACACTTGGCTTCTTTTGAAGCAAGAGTATTTTTTATTGCCCTTAC  1098

seq1  ATAGGAAGAAATCCCATTCATGGTTTAGTT  1123
       |||||||||||||||||||||||||||||
seq2  TTAGGAAGAAATCCCATTCATGGTTTAGTT  1128