BAC Information

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BAC

Clone NameB6Ng01-147I18
Chromosome14 (Build37)
Map Location 51,569,218 - 51,660,057
singlet/doubletdoublet
Overlap genePnp, LOC667034, LOC667210, Rnase10, Rnase9
Upstream geneOlfr724, LOC100041975, Olfr725, LOC100042882, Olfr726, Olfr727, Olfr728, Olfr729, Olfr730, Olfr731, Olfr732, Olfr733, Olfr734, Olfr735, Tlr11, Olfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742, Olfr743-ps1, Olfr744, Olfr745, Olfr746, Olfr747, Olfr748, Olfr749, Ttc5, Gm288, Rpph1, Parp2, Tep1, EG546611, Osgep, Apex1, Tmem55b
Downstream geneRnase11, Rnase12, Olfr750, GA_x5J8B7W5WBF-6267395-6266441, Rnase4, Ang1, Gm75, Rnase6, Rnase1, Ear5, Ear-ps1, Ang2, Ear14, Ear11, LOC100042187, EG633215, LOC100042203, LOC633238, EG638695, Vmn2r-ps110, LOC100042224, Vmn2r88, LOC100042247, V2r10, LOC100043041, EG434459, LOC100043031, LOC667289, EG545047, Ear-ps3, Ang4, Ear-ps4, AY358078, Hn1l-ps1, Ear-ps5, Ear6, Mett11d1, Slc39a2, Ndrg2, Gm77, Rnase13, E130112L23Rik, Zfp219, G630016D24Rik, LOC100042276, Olfr221
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147I18.bB6Ng01-147I18.g
ACCDH944397DH944398
length1,1031,082
definitionDH944397|Mus musculus domesticus DNA, BAC clone: B6Ng01-147I18, 5' end.DH944398|Mus musculus domesticus DNA, BAC clone: B6Ng01-147I18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,569,218 - 51,570,329)(51,658,972 - 51,660,057)
sequence
gaattcactttgtagaccaggctggccttgaactcagaaatccgcctgcc
tctgcctcccgagtgctgggaaagacactgccagataatggggatggtag
taacagttaatctgtatgctcccatgacccacataccccacaggattgct
atgtgggccaaaaagaaagagtcgtattgggctcgtcttccttgttcatc
tttaggatgccaacatatgccaggagctccctcgctggaataaggagaca
cacagtttagttagcagagttaattatcatacacattttaagctttggtt
tgtactctcttttgctcccttgcagtatgagtttctccatttggaaaagt
tttttgaaattccttctgttatatgttcacatcaatgttcttatcccatg
tctctaaggtacagttgtatgattataaagatcagcatactgctgttgtt
gttaattatatcatcatacgttagacacagtgagtggcttctagtaagtg
cttgtgtgtgtgatacagggaagtatgcttgcttttctttttgtagcagt
ctcgccacatatccctggctggcctggaacttgctgtgcagtctaggctg
gccttgaactgacagagacctccctgcttctgcctcctgagtactgaaag
aaaaagcatgtaccattcactacactgagcataatcactttgcttttttc
tctttgctgtctgtagtgcaaggtcacgcaggccgactggtgtttggatt
gctgaatggcagatgctgtgtgatgatgcaaggccggttccatatgtatg
aaggatactcactgtcaaaggtaaacacccaggggcacaagctttggttg
gatcaagaggaagatgggagaactgtcctactttgtctaaccatttgggc
tgcttcaaatttttgatcttttgtttcatggtcatattatccttaccttt
gagtgggttggtgagttttgaaagtcttttctgacttttgcatctaagtg
gacattcccaggtgaggagtttcatcttctgggtggtgaaactttggtgg
tacaatgctgcttgagaattacccaattttgaagttgagatttatgctga
tcc
gaattctctactgttgaggtcagcatagctataaatagtgatgtgaactg
gagtgagtttggggggtggggatacaattaaaacaggaacgataaagatt
acctcaggggcggaaggaatcaccaaggaaaacagtagacaggagatgaa
ggactttggaaaagagtggtgtgatgtggcaaaacacagagaagggcctt
aaaatagacattgcagttggcattgaagcagaaatagagtcagccaagga
gccagctcagtgtatgtctaatgcaccgctgctggccttccttggcctct
tcttcaagatatctttgaccagatgtgagcaagaagagagtgaaggcctg
agatggacagtgtttctcatcagagaaagatcaaaaagaggaggctggat
catttctggacaaattattaatttctggaagtgggaaaaaggtgtttgtt
ttagacagaacaggagaggtcctccagagagccactttcttctttcactg
tgggtgtggtctgccctctctacaaccttcctctaccccttttgctgatt
tccttcccacctccactgccccccatatcccctcacttcttcccactctc
ctctagctctgtctcttcctttcacacttcctcctttatctgctactcaa
tactaacacacttattttagagtcaacattaggaagctctttcaaataat
ttctgaaatctcaagtctaacactttttcaatgaactacatactcagagt
gccaaacagtgaaagttagtaaatgtggtctctatgtggaaatagaaaga
aacattgcatccctaatagaatgtctctatttcacatacaacttttgttt
ccgcaggcaaaaaaaaatgaaacctttggtcatcaagttcgcctggcctt
tgccatttgctgctgcttgctgctgctgcacgaagcttcaggggaactat
tggggattttggggattaggactaacccagagtacgtgacttttttaggg
atatgagagtacagggccaccaaaccacctaccgtaaagaatcatagaaa
ttgatcacattggtggacaaccttttatgact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_51569218_51570329
seq2: B6Ng01-147I18.b_49_1151

seq1  GAATTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAAATCCGCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAAATCCGCCTGCC  50

seq1  TCTGCCTCCCGAGTGCTGGGAAAGACACTGCCAGATAATGGGGATGGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCGAGTGCTGGGAAAGACACTGCCAGATAATGGGGATGGTAG  100

seq1  TAACAGTTAATCTGTATGCTCCCATGACCCACATACCCCACAGGATTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTTAATCTGTATGCTCCCATGACCCACATACCCCACAGGATTGCT  150

seq1  ATGTGGGCCAAAAAGAAAGAGTCGTATTGGGCTCGTCTTCCTTGTTCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGGCCAAAAAGAAAGAGTCGTATTGGGCTCGTCTTCCTTGTTCATC  200

seq1  TTTAGGATGCCAACATATGCCAGGAGCTCCCTCGCTGGAATAAGGAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGATGCCAACATATGCCAGGAGCTCCCTCGCTGGAATAAGGAGACA  250

seq1  CACAGTTTAGTTAGCAGAGTTAATTATCATACACATTTTAAGCTTTGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTTAGTTAGCAGAGTTAATTATCATACACATTTTAAGCTTTGGTT  300

seq1  TGTACTCTCTTTTGCTCCCTTGCAGTATGAGTTTCTCCATTTGGAAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTCTCTTTTGCTCCCTTGCAGTATGAGTTTCTCCATTTGGAAAAGT  350

seq1  TTTTTGAAATTCCTTCTGTTATATGTTCACATCAATGTTCTTATCCCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAAATTCCTTCTGTTATATGTTCACATCAATGTTCTTATCCCATG  400

seq1  TCTCTAAGGTACAGTTGTATGATTATAAAGATCAGCATACTGCTGTTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAAGGTACAGTTGTATGATTATAAAGATCAGCATACTGCTGTTGTT  450

seq1  GTTAATTATATCATCATACGTTAGACACAGTGAGTGGCTTCTAGTAAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTATATCATCATACGTTAGACACAGTGAGTGGCTTCTAGTAAGTG  500

seq1  CTTGTGTGTGTGATACAGGGAAGTATGCTTGCTTTTCTTTTTGTAGCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGTGTGTGATACAGGGAAGTATGCTTGCTTTTCTTTTTGTAGCAGT  550

seq1  CTCGCCACATATCCCTGGCTGGCCTGGAACTTGCTGTGCAGTCTAGGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCCACATATCCCTGGCTGGCCTGGAACTTGCTGTGCAGTCTAGGCTG  600

seq1  GCCTTGAACTGACAGAGACCTCCCTGCTTCTGCCTCCTGAGTACTGAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGAACTGACAGAGACCTCCCTGCTTCTGCCTCCTGAGTACTGAAAG  650

seq1  AAAAAGCATGTACCATTCACTACACTGAGCATAATCACTTTGCTTTTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCATGTACCATTCACTACACTGAGCATAATCACTTTGCTTTTTTC  700

seq1  TC-TTGCTGTCTGTAGTGCAAGGTCACGCAGGCCGACTGGTGTTTGGATT  749
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCTGTCTGTAGTGCAAGGTCACGCAGGCCGACTGGTGTTTGGATT  750

seq1  GCTGAATGGCAGATGCTGTGTGATGATGCAAGGCCGGTTCCATATGTATG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAATGGCAGATGCTGTGTGATGATGCAAGGCCGGTTCCATATGTATG  800

seq1  AAGGATACTCACTGTCAAAGGTAAACACCCAGGGGCACAAGC-TTGGTTG  848
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAGGATACTCACTGTCAAAGGTAAACACCCAGGGGCACAAGCTTTGGTTG  850

seq1  GATCAAGAGGAAGATGGGAGAACTGTCCTACTTTGTCTAACCATTTGGGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAGAGGAAGATGGGAGAACTGTCCTACTTTGTCTAACCATTTGGGC  900

seq1  TGCTTCAAATTTTTGATCTTTTGTTTCATGGTTCATATTATCCTTACCTT  948
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGCTTCAAATTTTTGATCTTTTGTTTCATGG-TCATATTATCCTTACCTT  949

seq1  TGAGTTGGTTGGTGAGGTTTTGAAAAGTCTTTTCTGACCTTTTGCATCTA  998
      ||||| ||||||||| |||||| |||||||||||||| ||||||||||||
seq2  TGAGTGGGTTGGTGA-GTTTTG-AAAGTCTTTTCTGA-CTTTTGCATCTA  996

seq1  AGGTGACATTCCCA-GTGA-GAGTTTTCCATCTTCTGGGTGTGGAAACTT  1046
      ||  |||||||||| |||| ||||||  |||||||||||||  |||||||
seq2  AGTGGACATTCCCAGGTGAGGAGTTT--CATCTTCTGGGTGGTGAAACTT  1044

seq1  TGGTGGTCACCAATGCTGCTGGAGGACTCAACCCCAATTTTGAAGTTGGA  1096
      |||||||   |||||||||| ||| | |    ||||||||||||||| ||
seq2  TGGTGGT--ACAATGCTGCTTGAGAATT---ACCCAATTTTGAAGTT-GA  1088

seq1  GATATTATGCTGATCC  1112
      ||| ||||||||||||
seq2  GAT-TTATGCTGATCC  1103

seq1: chr14_51658972_51660057
seq2: B6Ng01-147I18.g_68_1149 (reverse)

seq1  AGTCATTGAAAGGTTGGTCACCAATGGTGATC-ATTTCTATGATTCTTTT  49
      ||||| | ||||||||  ||||||| |||||| |||||||||||||  ||
seq2  AGTCA-TAAAAGGTTGTCCACCAAT-GTGATCAATTTCTATGATTC--TT  46

seq1  TACGGTAGGTGGTTTGGTGGGCCCTGTACTCTCATATTCCCTAATAAAGT  99
      |||||||||||||||||| ||||||||||||||||| ||||||| |||||
seq2  TACGGTAGGTGGTTTGGT-GGCCCTGTACTCTCATA-TCCCTAAAAAAGT  94

seq1  CACGTACTTCTGGGTTTAGTTCATATTCCCCAAAAT-CCCAATAGTTCCC  148
      ||||||| |||||| |||| || || |||||||||| |||||||||||||
seq2  CACGTAC-TCTGGG-TTAG-TCCTAATCCCCAAAATCCCCAATAGTTCCC  141

seq1  CTGAAGCTTCGGTGGCAGCAGCAGC-AGCAGCAGC-AATGGCAAAGGCCA  196
      |||||||||||   ||||||||||| ||||||||| ||||||||||||||
seq2  CTGAAGCTTCG--TGCAGCAGCAGCAAGCAGCAGCAAATGGCAAAGGCCA  189

seq1  GGCGAACTTGATGACCAAAGGTTTCATTTTTTTTTGCCTGCGGAAACAAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGAACTTGATGACCAAAGGTTTCATTTTTTTTTGCCTGCGGAAACAAA  239

seq1  AGTTGTATGTG-AATAGAGACATTCTATTA-GGATGCAATGTTTCTTTCT  294
      ||||||||||| |||||||||||||||||| |||||||||||||||||||
seq2  AGTTGTATGTGAAATAGAGACATTCTATTAGGGATGCAATGTTTCTTTCT  289

seq1  ATTTCCACATAGAGACCACATTTACTAACTTTCACTGTTTGGCACTCTGA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCACATAGAGACCACATTTACTAACTTTCACTGTTTGGCACTCTGA  339

seq1  GTATGTAGTTCATTGAAAAAGTGTTAGACTTGAGATTTCAGAAATTATTT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTAGTTCATTGAAAAAGTGTTAGACTTGAGATTTCAGAAATTATTT  389

seq1  G-AAGAGCTTCCTAATGTTGACTCTAAAATAAGTGTGTTAGTATTGAGTA  443
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGCTTCCTAATGTTGACTCTAAAATAAGTGTGTTAGTATTGAGTA  439

seq1  GCAGATAAAGGAGGAAGTGTGAAAGGAAGAGACAGAGCTAGAGGAGAGTG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATAAAGGAGGAAGTGTGAAAGGAAGAGACAGAGCTAGAGGAGAGTG  489

seq1  GGAAGAAGTGAGGGGATATGGGGGGCAGTGGAGGTGGGAAGGAAATCAGC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAGTGAGGGGATATGGGGGGCAGTGGAGGTGGGAAGGAAATCAGC  539

seq1  AAAAGGGGTAGAGGAAGGTTGTAGAGAGGGCAGACCACACCCACAGTGAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGGTAGAGGAAGGTTGTAGAGAGGGCAGACCACACCCACAGTGAA  589

seq1  AGAAGAAAGTGGCTCTCTGGAGGACCTCTCCTGTTCTGTCTAAAACAAAC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAGTGGCTCTCTGGAGGACCTCTCCTGTTCTGTCTAAAACAAAC  639

seq1  ACCTTTTTCCCACTTCCAGAAATTAATAATTTGTCCAGAAATGATCCAGC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTTTCCCACTTCCAGAAATTAATAATTTGTCCAGAAATGATCCAGC  689

seq1  CTCCTCTTTTTGATCTTTCTCTGATGAGAAACACTGTCCATCTCAGGCCT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTTTTTGATCTTTCTCTGATGAGAAACACTGTCCATCTCAGGCCT  739

seq1  TCACTCTCTTCTTGCTCACATCTGGTCAAAGATATCTTGAAGAAGAGGCC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTCTTCTTGCTCACATCTGGTCAAAGATATCTTGAAGAAGAGGCC  789

seq1  AAGGAAGGCCAGCAGCGGTGCATTAGACATACACTGAGCTGGCTCCTTGG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGCCAGCAGCGGTGCATTAGACATACACTGAGCTGGCTCCTTGG  839

seq1  CTGACTCTATTTCTGCTTCAATGCCAACTGCAATGTCTATTTTAAGGCCC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTCTATTTCTGCTTCAATGCCAACTGCAATGTCTATTTTAAGGCCC  889

seq1  TTCTCTGTGTTTTGCCACATCACACCACTCTTTTCCAAAGTCCTTCATCT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTGTTTTGCCACATCACACCACTCTTTTCCAAAGTCCTTCATCT  939

seq1  CCTGTCTACTGTTTTCCTTGGTGATTCCTTCCGCCCCTGAGGTAATCTTT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTACTGTTTTCCTTGGTGATTCCTTCCGCCCCTGAGGTAATCTTT  989

seq1  ATCGTTCCTGTTTTAATTGTATCCCCACCCCCCAAACTCACTCCAGTTCA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTTCCTGTTTTAATTGTATCCCCACCCCCCAAACTCACTCCAGTTCA  1039

seq1  CATCACTATTTATAGCTATGCTGACCTCAACAGTAGAGAATTC  1086
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTATTTATAGCTATGCTGACCTCAACAGTAGAGAATTC  1082