BAC Information

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BAC

Clone NameB6Ng01-147L21
Chromosome14 (Build37)3 (Build37)
Map Location 20,515,305 - 20,515,46818,271,239 - 18,271,941
singlet/doubletsingletsinglet
Overlap geneEG664855
Upstream geneUbe2e2, LOC627741, LOC100042299, LOC675069, LOC100042322, LOC632470, EG632477, EG632498, EG667341, LOC667344, LOC619996, EG434616, LOC675165, 1700110I01Rik, EG664814, LOC100039452, LOC100038983, LOC100039441, EG432825, LOC673583
Downstream geneNid2, 2700060E02Rik, LOC100039534, Gng2, 1810063B07Rik, Kcnk5, LOC100039106, Kcnk16, Nudt13, Ecd, AA536717, Dnajc9, Mrps16, Ttc18, Anxa7, Zmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147L21.bB6Ng01-147L21.g
ACCDH944536DH944537
length679730
definitionDH944536|Mus musculus domesticus DNA, BAC clone: B6Ng01-147L21, 5' end.DH944537|Mus musculus domesticus DNA, BAC clone: B6Ng01-147L21, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(20,515,305 - 20,515,468)(18,271,239 - 18,271,941)
sequence
gaattccattattctttctccagcacaagataaatgtgagaaaggattgc
taagaccaatattatgaaaatgttcccttctgtttttctccaggaggttt
atcatttggggtctttacttaaaagtgtgtgtgtatgtgtgtgtgtgtgt
gtgtgtgtgtgtgtttggataaagagaaacattcctccattgctggtagg
attgcacactggtacaactaatctagaaattaacctaccaggtctgcaaa
atattggaaataggtatagctaaaaacccagctatactactcctgggcat
attatcaaaagttgctccaccataccacaaggatatgtgttccactatgc
tcatagcagccttatatgtaatagccagaatctggaaacaattcagatat
ccctcaaagaatggttacaaaaaatgtgattcacttacacaatggaatat
tattcagatattaaaaccaaggacatcttgaatttgcagacagattgatg
gaactagaaaatatcatcctaagtgaggtaaccaagacgccaaatgacat
tcatggtatgtactcactgataagtggatgttaaccaaaaaggacagaat
acctaggacacagtggggtaacaaaataatcatgtgaggcagagggaggg
agggagggacctgggtctaagatgtgagg
gaattcactttgtagaccaggttggatggaaaatcagaggggagggaaag
aatactccgggaggttttctgataatgaaatgtttgctccttcagagact
atgggagcaagtagggctggcgatgcaacatgggtaggaggctttactga
acgcccttgaggaaacccacatctgtgcttgcttgaccaccctccaaaga
cccttaacaagtgtctccagccactccaccctgtgaacagatcactgtcc
caatatcgggaaagccaaatcatttgtgttctgatgggagcattgaacat
aaataacaaattaactgttactgcaggaacttgctatgccatgacctgac
ttgattcagtgagtactgaaagcatggtaacttttgcttttatgtagatg
acatctacataaaacattgtaaagactgcctcaaagagatcatcaattgc
agagagatttccaatgtgaagacactttgattttcagaaaacattatttt
atggtataagaaaggagtaagaaggccactttaccatggtcttgattcct
gcaaattgtccatgttctctgttggtgatcatgaaagtcactggagtcat
atgcatgcccaaacatcctgtatttacatgaaatgagttagatggcattg
tttcctagggtccattctggtttacctaatagttttaaatcctttagtca
ttttggggcttatggatttaactggtgatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_20515305_20515468
seq2: B6Ng01-147L21.b_43_206

seq1  GAATTCCATTATTCTTTCTCCAGCACAAGATAAATGTGAGAAAGGATTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTATTCTTTCTCCAGCACAAGATAAATGTGAGAAAGGATTGC  50

seq1  TAAGACCAATATTATGAAAATGTTCCCTTCTGTTTTTCTCCAGGAGGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACCAATATTATGAAAATGTTCCCTTCTGTTTTTCTCCAGGAGGTTT  100

seq1  ATCATTTGGGGTCTTTACTTAAAAGTGTGTGTGTATGTGTGTGTGTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTGGGGTCTTTACTTAAAAGTGTGTGTGTATGTGTGTGTGTGTGT  150

seq1  GTGTGTGTGTGTGT  164
      ||||||||||||||
seq2  GTGTGTGTGTGTGT  164

seq1: chr3_18271239_18271941
seq2: B6Ng01-147L21.g_91_795

seq1  ATGGAAAATCAGAGGGGAGGGAAAGAAGACACAAGGGAGGTTTTCTGATA  50
      ||||||||||||||||||||||||||| || |  ||||||||||||||||
seq2  ATGGAAAATCAGAGGGGAGGGAAAGAATACTC-CGGGAGGTTTTCTGATA  49

seq1  ATGAAATGTTTGCTCCTTCAGAGACTATGGGAGCAAGTAGGGCTGGCAGT  100
      |||||||||||||||||||||||||||||||||||||||||||||||  |
seq2  ATGAAATGTTTGCTCCTTCAGAGACTATGGGAGCAAGTAGGGCTGGCGAT  99

seq1  GCAAGATGGGTAGGAGGCATTACTGAGCACCCATGAGGAAACCCACATCT  150
      |||| ||||||||||||| ||||||| | ||| |||||||||||||||||
seq2  GCAACATGGGTAGGAGGCTTTACTGAACGCCCTTGAGGAAACCCACATCT  149

seq1  GTGCATGCTTGAGCACCCTCCAGAGACCCTTAACAAGTGTCTCCAGCCAC  200
      |||| ||||||| ||||||||| |||||||||||||||||||||||||||
seq2  GTGCTTGCTTGACCACCCTCCAAAGACCCTTAACAAGTGTCTCCAGCCAC  199

seq1  TCCACCCTGTGAACAGATCACTGTCCCAATATCGGGAAAGCCAAATCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCCTGTGAACAGATCACTGTCCCAATATCGGGAAAGCCAAATCATT  249

seq1  TGTGTTCTGATGGGAGCATTGAACAGAAATAACAAATTAACTGTTACTGC  300
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGTGTTCTGATGGGAGCATTGAACATAAATAACAAATTAACTGTTACTGC  299

seq1  AGGAACTTGCTATGCCATGACCTGACTTGATTCAGTGAGTTCTGAAAGCA  350
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGGAACTTGCTATGCCATGACCTGACTTGATTCAGTGAGTACTGAAAGCA  349

seq1  TGGTAACTTTTGCTTTTATGTAGATGACATCTACATAAAACATTGTAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAACTTTTGCTTTTATGTAGATGACATCTACATAAAACATTGTAAAG  399

seq1  ACTGCCTCAAAGAGATCATCATTTGCAGAGAGATTTCCAATGTGAAGACA  450
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACTGCCTCAAAGAGATCATCAATTGCAGAGAGATTTCCAATGTGAAGACA  449

seq1  CTTTGATTTTCAGAAAACATTATTTTATGGTATAAGAAAGGAGTAAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATTTTCAGAAAACATTATTTTATGGTATAAGAAAGGAGTAAGAAG  499

seq1  GCCACTTTACCATGGTCTTGATTCCTGCAAATTGTCCATGTTCTCTGTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTTTACCATGGTCTTGATTCCTGCAAATTGTCCATGTTCTCTGTTG  549

seq1  GTGATCATGAAAGTCACTGGAGTCATATGCATGCCCAAACATCCTGTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCATGAAAGTCACTGGAGTCATATGCATGCCCAAACATCCTGTATT  599

seq1  TACATGAAATGAGTTAGATGGCATTGTTTCCTA-GGTCCATTCTGGTTTA  649
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TACATGAAATGAGTTAGATGGCATTGTTTCCTAGGGTCCATTCTGGTTTA  649

seq1  CCTTATAGTTTTAAATCCTTAAGTCA-TTTGGGGCTTAT-GATTTAACTG  697
      ||| |||||||||||||||| ||||| |||||||||||| ||||||||||
seq2  CCTAATAGTTTTAAATCCTTTAGTCATTTTGGGGCTTATGGATTTAACTG  699

seq1  GTGATT  703
      ||||||
seq2  GTGATT  705