BAC Information

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BAC

Clone NameB6Ng01-147M07
Chromosome14 (Build37)
Map Location 35,298,511 - 35,299,607
singlet/doubletsinglet
Overlap geneBmpr1a
Upstream geneFrmpd2, LOC100040093, Ptpn20, Gdf10, Gdf2, Rbp3, Zfp488, EG665754, EG432838, Antxrl, Anxa8, LOC100041131, LOC665768, Ppyr1, LOC100041163, Gprin2, Syt15, 3110001K24Rik, LOC623142, Glud1, LOC100041231, 2200001I15Rik, Sncg, Mmrn2
Downstream gene9230112D13Rik, LOC665834, Ldb3, Opn4, 5830448L01Rik, Wapal, LOC100041341, Grid1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147M07.bB6Ng01-147M07.g
ACCDH944556DH944557
length1,094530
definitionDH944556|Mus musculus domesticus DNA, BAC clone: B6Ng01-147M07, 5' end.DH944557|Mus musculus domesticus DNA, BAC clone: B6Ng01-147M07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcccgagagctcagtgagctctaccactgtttttacagatggaa
aacctgaggttaaggttacatgaccttaaatagaactccaaatatctgac
catcactggcctcaactttttcatttgtggattcaactgcaaaccctatc
taagctctgacgtaggtgctcgtggtggtgtctgctggtttgagcgtatg
catgagcaaatgcaggtgcacacgcacttacctgtatggccatgagcgtg
aggccacaggtcttccctggattgttctcttagtttataaaatgagaccc
aggacagccaaggctactactcagagaaaccctgtcttgaaaaaccaaaa
aggaaaaaaaaaaaagaaaaaagaaaaaaaaaaaaacccctttcaaaatc
tcttctaagttatgcactgaagatgttatcataattcaccattaaatatt
tgttgttgccaaggatcaaacccttccattcgccactgaactatacctca
gcaccaaaatatttttaatttttagcagctaacaatatattgctgaataa
atgacttgaacatttcttcatttttgttaaaattaaaagaaaaaaaagct
taactgctaagccatctctctaaccattttgaagattaagattttgtttc
atttttggaaacaaaattcagatactataaaatcccccctttgataactc
taagtagatacaacaaaaagaccactactaattccagaacattctcaccc
catgaaaacaaaatcatagtcctactcagattccccaccactggcacccc
agaaaggctatgtttttttcttccaatttctttaaatgaactcaaataaa
catgtggtcttttgtgaaggacgtactcactgtttttctttcggatgagg
attagctagtctaggctggctctgaacttgctttgaaaccgataaaagac
tttaacttctgagcctccacatcccgaggactgggaagccatgcatttcc
aggttgtttgaggaaggcttgagtggaatgcagggaggatcatgcgcgct
gagcagcgctttgcccactgagctactacatactacccctgcag
tctgttaagcgctgtacaccatttctcattggattatttgtgttgtggtg
tctaacttcttgagttctttgtaagttttggagattagttctctgtcaaa
tgtagtgttggtgaatatcctttcccaatcagttggttgctgtcaatttt
gtatccagccactttgaacaatggataaagaaaatgaggtacatctacac
aatagactactatttagctattaaaaacaaggccatcatgaaatttgcag
gtaagtggatggaactctatcatcctgagtgaggtaactcagccccaaaa
gagacatgcatggtatgtactctcttataagtggatattagccataaagt
acaggatacccatgctacactccacagacctaaagaagctaaacaagaaa
gaaagtacaaatgatgatgcatgaatctcccttagaagggggaataaaat
agtcaaaagtggcagatggaaggagggaactgagagggaggtggatgggg
gcattcatgatcaggtgtggggagggatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_35298511_35299607
seq2: B6Ng01-147M07.b_48_1141

seq1  GAATTCTCCCGAGAGCTCAGTGAGCTCTACCACTGTTTTTACAGATGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCGAGAGCTCAGTGAGCTCTACCACTGTTTTTACAGATGGAA  50

seq1  AACCTGAGGTTAAGGTTACATGACCTTAAATAGAACTCCAAATATCTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGAGGTTAAGGTTACATGACCTTAAATAGAACTCCAAATATCTGAC  100

seq1  CATCACTGGCCTCAACTTTTTCATTTGTGGATTCAACTGCAAACCCTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTGGCCTCAACTTTTTCATTTGTGGATTCAACTGCAAACCCTATC  150

seq1  TAAGCTCTGACGTAGGTGCTCGTGGTGGTGTCTGCTGGTTTGAGCGTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTCTGACGTAGGTGCTCGTGGTGGTGTCTGCTGGTTTGAGCGTATG  200

seq1  CATGAGCAAATGCAGGTGCACACGCACTTACCTGTATGGCCATGAGCGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGCAAATGCAGGTGCACACGCACTTACCTGTATGGCCATGAGCGTG  250

seq1  AGGCCACAGGTCTTCCCTGGATTGTTCTCTTAGTTTATAAAATGAGACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCACAGGTCTTCCCTGGATTGTTCTCTTAGTTTATAAAATGAGACCC  300

seq1  AGGACAGCCAAGGCTACTACTCAGAGAAACCCTGTCTTGAAAAACCAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGCCAAGGCTACTACTCAGAGAAACCCTGTCTTGAAAAACCAAAA  350

seq1  AGGAAAAAAAAAAAAGAAAAAAGAAAAAAAAAAAAACCCCTTTCAAAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAAAAAAAAAGAAAAAAGAAAAAAAAAAAAACCCCTTTCAAAATC  400

seq1  TCTTCTAAGTTATGCACTGAAGATGTTATCATAATTCACCATTAAATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTAAGTTATGCACTGAAGATGTTATCATAATTCACCATTAAATATT  450

seq1  TGTTGTTGCCAAGGATCAAACCCTTCCATTCGCCACTGAACTATACCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTGCCAAGGATCAAACCCTTCCATTCGCCACTGAACTATACCTCA  500

seq1  GCACCAAAATATTTTTAATTTTTAGCAGCTAACAATATATTGCTGAATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCAAAATATTTTTAATTTTTAGCAGCTAACAATATATTGCTGAATAA  550

seq1  ATGACTTGAACATTTCTTCATTTTTGTTAAAATTAAAAGAAAAAAAAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTGAACATTTCTTCATTTTTGTTAAAATTAAAAGAAAAAAAAGCT  600

seq1  TAACTGCTAAGCCATCTCTCTAACCATTTTGAAGATTAAGATTTTGTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGCTAAGCCATCTCTCTAACCATTTTGAAGATTAAGATTTTGTTTC  650

seq1  ATTTTTGGAAACAAAATTCAGATACTATAAAATCCCCCCTTTGATAACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGGAAACAAAATTCAGATACTATAAAATCCCCCCTTTGATAACTC  700

seq1  TAAGTAGATACAACAAAAAGACCACTACTAATTCCAGAACATTCTCACCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAGATACAACAAAAAGACCACTACTAATTCCAGAACATTCTCACCC  750

seq1  CATGAAAACAAAATCATAGTCCTACTCAGATTCCCCACCACTGGCACCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAACAAAATCATAGTCCTACTCAGATTCCCCACCACTGGCACCCC  800

seq1  AGAAAGGCTATGTTTTTTTCTTCCAATTTCTTTAAATGAACTCAAATAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGCTATGTTTTTTTCTTCCAATTTCTTTAAATGAACTCAAATAAA  850

seq1  CATGTGGTCTTTTGTGAAGGACGTACTCACTGTTTTTCTTTCGGATGAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGTCTTTTGTGAAGGACGTACTCACTGTTTTTCTTTCGGATGAGG  900

seq1  ATTAGCTAGTCTAGGCTGGCTCTGAACTTGCTTTGAAACCGAT-AAAGAC  949
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATTAGCTAGTCTAGGCTGGCTCTGAACTTGCTTTGAAACCGATAAAAGAC  950

seq1  TTTAACTTCTGAGCCTCCACATCCCGAGGACTGGGAAGCCATGCATTTCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTTCTGAGCCTCCACATCCCGAGGACTGGGAAGCCATGCATTTCC  1000

seq1  AGGTTGGTTTGAGAGAGGCTAGAGTGGAATGCAGAGAGGATCATGCGCGC  1049
      ||||| |||||||  ||||| ||||||||||||| |||||||||||||||
seq2  AGGTT-GTTTGAGGAAGGCTTGAGTGGAATGCAGGGAGGATCATGCGCGC  1049

seq1  TGAGCAAGCGCTCTGCCAACTGAGCTACTACATTACTACCCCCTGCAG  1097
      ||||| |||||| |||| |||||||||||||| ||||| |||||||||
seq2  TGAGC-AGCGCTTTGCCCACTGAGCTACTACA-TACTA-CCCCTGCAG  1094