BAC Information

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BAC

Clone NameB6Ng01-148C22
Chromosome14 (Build37)
Map Location 122,031,805 - 122,152,918
singlet/doubletdoublet
Overlap geneDock9
Upstream geneLOC668835, LOC668837, Ranbp5, Farp1, LOC100043837, Stk24, Slc15a1, LOC100043577
Downstream geneLOC668843, Phgdhl1, Gpr18, Ebi2, Timm8a2, Tm9sf2, LOC621710, Clybl, 1700108J01Rik, EG328479, EG432907, Zic5, Zic2, ENSMUSG00000075465, LOC668847, Pcca
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148C22.bB6Ng01-148C22.g
ACCDH944862DH944863
length1,145979
definitionDH944862|Mus musculus domesticus DNA, BAC clone: B6Ng01-148C22, 5' end.DH944863|Mus musculus domesticus DNA, BAC clone: B6Ng01-148C22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(122,031,805 - 122,032,932)(122,151,944 - 122,152,918)
sequence
gaattcttcctaggaagatataaggagacagacacatggtacctgaacac
aggtaaccagccatgtggcagaaaataaaacagcatattttagttacgat
ctagtcagaagtagagcctagctatatggccaaggtatttgtcagtatat
tctgagtctgattcttatttctgggaacgtgaggctgggagaaagaatca
ggccaaatttcaacaaaatggcacccaacatggggctccatctgtaaatg
aattattctttgtttgttttgtttttgtttttttgttttgttttgttttg
ttttgttttgttttgttttttgagacagggtttctctgtgtagccctggc
tgtcctggaactcactttgtagaccaggctggccttaaactcagaaattc
gcctgcctctgcctcccgagtgctaggattaaaggtgtgcaccaccacgc
ccggcattgtaaatgaattattcttaatataaatgtaagcagtgaattaa
actggcggctgtatttctttaccttatgctggtccacactaactacacag
agaagccaagatttatttaaagctgtacctcaattgctgagcagtgaaat
gatatatctttcctttctatgttagtcttgtgtgtttccataatctctct
caggacctcttcttcatggctccaaacgttccaacctcgctggtctgaat
cgccctcactctttcctctggttggcagacatcatgccctagtctctagt
ttgcccagttgttgggtgaccaacacttactgacaagggcagagtaagaa
ttgtttacacaaagagggagattattttgtataaatattacaatgttcgt
gtctggattgaaacaagattatgagggcaaagaaatcagcatctgagtta
acacaagggtaaactttatacaatgtacagaaacattattcttacacatc
aatgtcactatgctctgagcttccgtgaactaactcctagcagcaaggga
atccagtttttggacatgtaataaaatgttcagtttttttccttggtaac
catcacacaacataagtggtggtataaagataagggtaaatggacttaag
aacaattccttgaaaggcaactcttccctgtctcagtaacaaaac
gaattctgctttgtcttgcatctttcatttagaataatgatcctgaggcc
acccatgttgttgtctctatcttgcttgcttccttttactgatggaccta
tcatttattaatcatgtttccagtggttggttattacagataaagttgct
tatgcatagttgtgggccaagttctgtttggataggtacggtgatcaggg
tcacgagccaccgcctctgccacatctcatttgccgtggttttactgttg
cttctgaaacgatctccttgctagttcctactgtgtcagagaaaaccggg
gaaatcgggcaaagtgatttagggtgcagctgtgtttgactagtcatggt
gacgtcctgatccgaggaagcacggaagccacgaccctcctcctgctcct
ccctccactgggattgtgttgcagaacttcttatgggcttttttgtcttt
ggcttccagggatgcggtttggctgtggatgtgggatgtgtggatgtcct
gagctgttaaaaatgtgttttccttagcctgaggatcctcaaacaatcca
ctagatggagcatcttgaatatattttgtgattagaggatgggagaaaga
gaatccctgcatccgagccatattgaggacccttgacgttggccaggcat
ttgatctgtcaccccctctattaatataaaatgttccttctacttagcat
gttaatacagaagtttctaggatgcccgactgaagtattacgtggcaaga
agtctaatctggatgtctgtggctacatgacggacatgcgagcgtagaca
ctcagtgactcagccgtgtcttgaacctcgcagccctcatttgtgactca
gttacactgcacagcagatgaggttactttatacaaaccgtaggatggtg
catcttctggtgccatcccacaggctactattgacgaatcatgtaactca
atggttcggttttatttcccataaggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_122031805_122032932
seq2: B6Ng01-148C22.b_47_1191

seq1  GAATTCTTCCTAGGAAGATATAAGGAGACAGACACATGGTACCTGAACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCTAGGAAGATATAAGGAGACAGACACATGGTACCTGAACAC  50

seq1  AGGTAACCAGCCATGTGGCAGAAAATAAAACAGCATATTTTAGTTACGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAACCAGCCATGTGGCAGAAAATAAAACAGCATATTTTAGTTACGAT  100

seq1  CTAGTCAGAAGTAGAGCCTAGCTATATGGCCAAGGTATTTGTCAGTATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCAGAAGTAGAGCCTAGCTATATGGCCAAGGTATTTGTCAGTATAT  150

seq1  TCTGAGTCTGATTCTTATTTCTGGGAACGTGAGGCTGGGAGAAAGAATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTCTGATTCTTATTTCTGGGAACGTGAGGCTGGGAGAAAGAATCA  200

seq1  GGCCAAATTTCAACAAAATGGCACCCAACATGGGGCTCCATCTGTAAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAATTTCAACAAAATGGCACCCAACATGGGGCTCCATCTGTAAATG  250

seq1  AATTATTCTTTGTTTGTTTTGTTTTTGTTTTTTTGTTTTGTTTTGTTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTCTTTGTTTGTTTTGTTTTTGTTTTTTTGTTTTGTTTTGTTTTG  300

seq1  TTTTGTTTTGTTTTGTTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTGTTTTGTTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGC  350

seq1  TGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTTAAACTCAGAAATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTTAAACTCAGAAATTC  400

seq1  GCCTGCCTCTGCCTCCCGAGTGCTAGGATTAAAGGTGTGCACCACCACGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCTCTGCCTCCCGAGTGCTAGGATTAAAGGTGTGCACCACCACGC  450

seq1  CCGGCATTGTAAATGAATTATTCTTAATATAAATGTAAGCAGTGAATTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCATTGTAAATGAATTATTCTTAATATAAATGTAAGCAGTGAATTAA  500

seq1  ACTGGCGGCTGTATTTCTTTACCTTATGCTGGTCCACACTAACTACACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCGGCTGTATTTCTTTACCTTATGCTGGTCCACACTAACTACACAG  550

seq1  AGAAGCCAAGATTTATTTAAAGCTGTACCTCAATTGCTGAGCAGTGAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCAAGATTTATTTAAAGCTGTACCTCAATTGCTGAGCAGTGAAAT  600

seq1  GATATATCTTTCCTTTCTATGTTAGTCTTGTGTGTTTCCATAATCTCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATCTTTCCTTTCTATGTTAGTCTTGTGTGTTTCCATAATCTCTCT  650

seq1  CAGGACCTCTTCTTCATGGCTCCAAACGTTCCAACCTCGCTGGTCTGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACCTCTTCTTCATGGCTCCAAACGTTCCAACCTCGCTGGTCTGAAT  700

seq1  CGCCCTCACTCTTTCCTCTGGTTGGCAGACATCATGCCCTAGTCTCTAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCTCACTCTTTCCTCTGGTTGGCAGACATCATGCCCTAGTCTCTAGT  750

seq1  TTGCCCAGTTGTTGGGTGACCAACACTTACTGACAA-GGCAGAGTAAGAA  799
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTGCCCAGTTGTTGGGTGACCAACACTTACTGACAAGGGCAGAGTAAGAA  800

seq1  TTGTTTACACAAAGAGGGAGATTA-TTTGTATAAATATTACAATG-TCGT  847
      |||||||||||||||||||||||| |||||||||||||||||||| ||||
seq2  TTGTTTACACAAAGAGGGAGATTATTTTGTATAAATATTACAATGTTCGT  850

seq1  GTCTGGATTGAAACAAGA-TATGAGGGCAAAGAAATCAGCATCTGAG-TA  895
      |||||||||||||||||| |||||||||||||||||||||||||||| ||
seq2  GTCTGGATTGAAACAAGATTATGAGGGCAAAGAAATCAGCATCTGAGTTA  900

seq1  ACACAAGGGTAAACTTTATACAATGTACAGAAACATTATTCTTACACATC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAGGGTAAACTTTATACAATGTACAGAAACATTATTCTTACACATC  950

seq1  AATGTCACTATGCTCTGAGCTTCCGTGAACTAACTCCTAAGCAGC-AGGG  994
      |||||||||||||||||||||||||||||||||||||| |||||| ||||
seq2  AATGTCACTATGCTCTGAGCTTCCGTGAACTAACTCCT-AGCAGCAAGGG  999

seq1  AATCCAG-TTCTGGACATGTAAT-ATATGTTCAGTATTTCTCCTTTGTTA  1042
      ||||||| || |||||||||||| | ||||||||| ||| ||| ||| ||
seq2  AATCCAGTTTTTGGACATGTAATAAAATGTTCAGTTTTTTTCC-TTGGTA  1048

seq1  CCCAT--CACAACATAAGTG--TGTAT-AAGAT-ATGGTAAATGGACTTA  1086
       ||||  |||||||||||||   |||| ||||| | ||||||||||||||
seq2  ACCATCACACAACATAAGTGGTGGTATAAAGATAAGGGTAAATGGACTTA  1098

seq1  AGAAC-ATTCCTTGAAAGGC-ACACTTCCCTGTC-CAG--ACAAAAC  1128
      ||||| |||||||||||||| || |||||||||| |||  |||||||
seq2  AGAACAATTCCTTGAAAGGCAACTCTTCCCTGTCTCAGTAACAAAAC  1145

seq1: chr14_122151944_122152918
seq2: B6Ng01-148C22.g_67_1045 (reverse)

seq1  TTTCC-TCTGGGAA--AAAACAGAACCATTGTGTTAC-TG-TTCGTCAAT  45
      ||||| | ||||||  ||||| ||||||||| ||||| || |||||||||
seq2  TTTCCTTATGGGAAATAAAACCGAACCATTGAGTTACATGATTCGTCAAT  50

seq1  AGTGGCCTGATGGGATGGCA-CAGAAGATGCACCATCCTACGGTTTGTAT  94
      ||| ||||| |||||||||| |||||||||||||||||||||||||||||
seq2  AGTAGCCTG-TGGGATGGCACCAGAAGATGCACCATCCTACGGTTTGTAT  99

seq1  AAAGTATACCTCATCTACTGTGCAGTGTAACTGAGTCACAAATGAGGGCT  144
      |||||| ||||||||| |||||||||||||||||||||||||||||||||
seq2  AAAGTA-ACCTCATCTGCTGTGCAGTGTAACTGAGTCACAAATGAGGGCT  148

seq1  GCGAGGTTCAAGACACGGCTGAGTCACTGAGTGTCTACGCTCGCATGTCC  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGGTTCAAGACACGGCTGAGTCACTGAGTGTCTACGCTCGCATGTCC  198

seq1  GTCATGTAGCCACAGACATCCAGATTAGACTTCTTGCCACGTAATACTTC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGTAGCCACAGACATCCAGATTAGACTTCTTGCCACGTAATACTTC  248

seq1  AGTCGGGCATCCTAGAAACTTCTGTATTAACATGCTAAGTAGAAGGAACA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGGGCATCCTAGAAACTTCTGTATTAACATGCTAAGTAGAAGGAACA  298

seq1  TTTTATATTAATAGAGGGGGTGACAGATCAAATGCCTGGCCAACGTCAAG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATATTAATAGAGGGGGTGACAGATCAAATGCCTGGCCAACGTCAAG  348

seq1  GGTCCTCAATATGGCTCGGATGCAGGGATTCTCTTTCTCCCATCCTCTAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTCAATATGGCTCGGATGCAGGGATTCTCTTTCTCCCATCCTCTAA  398

seq1  TCACAAAATATATTCAAGATGCTCCATCTAGTGGATTGTTTGAGGATCCT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAAATATATTCAAGATGCTCCATCTAGTGGATTGTTTGAGGATCCT  448

seq1  CAGGCTAAGGAAAACACATTTTTAACAGCTCAGGACATCCACACATCCCA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTAAGGAAAACACATTTTTAACAGCTCAGGACATCCACACATCCCA  498

seq1  CATCCACAGCCAAACCGCATCCCTGGAAGCCAAAGACAAAAAAGCCCATA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCACAGCCAAACCGCATCCCTGGAAGCCAAAGACAAAAAAGCCCATA  548

seq1  AGAAGTTCTGCAACACAATCCCAGTGGAGGGAGGAGCAGGAGGAGGGTCG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTCTGCAACACAATCCCAGTGGAGGGAGGAGCAGGAGGAGGGTCG  598

seq1  TGGCTTCCGTGCTTCCTCGGATCAGGACGTCACCATGACTAGTCAAACAC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCCGTGCTTCCTCGGATCAGGACGTCACCATGACTAGTCAAACAC  648

seq1  AGCTGCACCCTAAATCACTTTGCCCGATTTCCCCGGTTTTCTCTGACACA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCACCCTAAATCACTTTGCCCGATTTCCCCGGTTTTCTCTGACACA  698

seq1  GTAGGAACTAGCAAGGAGATCGTTTCAGAAGCAACAGTAAAACCACGGCA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAACTAGCAAGGAGATCGTTTCAGAAGCAACAGTAAAACCACGGCA  748

seq1  AATGAGATGTGGCAGAGGCGGTGGCTCGTGACCCTGATCACCGTACCTAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGATGTGGCAGAGGCGGTGGCTCGTGACCCTGATCACCGTACCTAT  798

seq1  CCAAACAGAACTTGGCCCACAACTATGCATAAGCAACTTTATCTGTAATA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACAGAACTTGGCCCACAACTATGCATAAGCAACTTTATCTGTAATA  848

seq1  ACCAACCACTGGAAACATGATTAATAAATGATAGGTCCATCAGTAAAAGG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACCACTGGAAACATGATTAATAAATGATAGGTCCATCAGTAAAAGG  898

seq1  AAGCAAGCAAGATAGAGACAACAACATGGGTGGCCTCAGGATCATTATTC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAGCAAGATAGAGACAACAACATGGGTGGCCTCAGGATCATTATTC  948

seq1  TAAATGAAAGATGCAAGACAAAGCAGAATTC  975
      |||||||||||||||||||||||||||||||
seq2  TAAATGAAAGATGCAAGACAAAGCAGAATTC  979