BAC Information

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BAC

Clone NameB6Ng01-148H21
Chromosome14 (Build37)
Map Location 42,396,141 - 42,396,926
singlet/doubletsinglet
Overlap genenone
Upstream geneSh2d4b, Tspan14, 5730469M10Rik, Dydc2, EG622782, Dydc1, Mat1a, Sftpa1, LOC100040498, LOC666079, Mbl1, Sftpd, LOC666093, EG666099, LOC100040545, LOC676294, LOC545034, LOC100040587, EG666138, EG624191, EG666149, LOC666155, EG666156, LOC100040642, LOC100041729, LOC624277, LOC100041810, EG666186, LOC100041722
Downstream geneLOC100041841, EG666207, LOC666214, LOC632737, EG623168, LOC100041849, 1700016D02Rik, LOC100040726, LOC666228, LOC666233, LOC100041930, EG666152, EG385234, LOC100041950, LOC100041910, LOC674032, EG666239, LOC100040759, LOC100040771, EG666253, EG666264, LOC100040787, EG666280, EG666285, LOC666298, LOC100042031, EG666318, EG546249, LOC100040863, LOC100040875, LOC100040890, LOC100042055
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148H21.bB6Ng01-148H21.g
ACCDH945086DH945087
length9391,150
definitionDH945086|Mus musculus domesticus DNA, BAC clone: B6Ng01-148H21, 5' end.DH945087|Mus musculus domesticus DNA, BAC clone: B6Ng01-148H21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatgcagtgattgttcagggctaagattaagacaaaggagaatt
acgttttagtatgcagagcttccacaggatattgagatgtttctatcaca
gcctacatcaggaaatccctaatttcaaatggcaggaacccaggaggaat
gtgtctcctgcttctcaagaccacagacaccatccttttttacaaggagc
tgctgcaggctgctgagaggtttccattgtgacctgtagtgggcagtccc
tctaatttcatgctctctccatcaccctttaaatgtaaaaatacagataa
ccactgccaaacattaggctgtggtcagagagtcttgtggaagtgttggt
ggaagggttgtagtagccagaagggttaggaagccacaagaggagccaca
gtcaactaatctgggttcttggggttcacagagacagaacaatgagccaa
caccatgtaggggcttgaacaataaatgaaacagatgtacatcttggtct
tcatgtgggtgactaacaattggagtgggtgctgcctcggatttagactc
tgttactgaaagaacctagtggggaaacccccactcaatttccattaggt
gcgcacccaagaatcacgaacagacgactatcatgatgtaaatgcatgag
gtagtttaatgatggagctccgggcagacacgtatgtcccgcagagacag
aggtttcgaccacatggtggagccataatggcggagctccggttcgaaac
atatctcacacaggacacagtgttttccaccccgaggcttgggaagctag
ggactttttatagaaaaggggtggggctgggggaggaattggcgtggttt
tacatgattggtccatttaaacatcaacagactgtctgaagggcgggaga
tagggaggcactaggccagtcaggacatgtaatgactgg
gaattcagagttctggtctcaggaagtaaagaatttttctagaatggaaa
cactacaaaactctcagtagagttcaggaaaaggtggatgggcctcattc
ttactttgggcctattgtacccaaatacagtgagggattcatgcctatac
tatttgagtggaatccctgctgcattgttttccaggctcagcggtaatca
gctacccaaactataactaatactttttcattacccgttttctccagttc
cccataaaggttattcatctgactacctgagagacagagtgggcttctga
ctaccacaccatcccccagacaccttgtaccaatgtcatagtgatattgc
atagctcaagatggtagacaaagacaacacaatcaatttggaaaggcttt
acatgatttttccactattttactggagagtttaggtagcattttagcat
gcattcagcacacccaggtcaagaaggtagaaggaacagatgtcaatgcc
agagcccctcctgaaattatggatccattaaaattgaggtttcactggac
ccgaggcctgttcatcctcgatccatccaattgagtcttaggtatcttat
gaatacaggatcatattccaatctccaacagactcaggcctagaactggg
aactcaaaaatgtagaaactggagaagtgagagctaatgggactacgaag
aagcaatccaatgtccctgttggcctttgttcacagatgcctattttgtc
tggttgttttggagatagagagaatgtgggattttagctttgaagaaggg
acataactttacaatttgatgttgcccctgtccctgacttcttctattgc
caagtacaagggagtttcattgcaaagaatggggttgtaaatcagagatt
catgaaacccattgctcactttattgaaacatgtctcctcctcaaggcag
ttgcacacttaaccacatatactcacttgtgtaagtttaaggtgcaggtt
agttttggatctgggaaacagagacactggtaatcgactgtgtacatgac
tgaaccagagtgatttaattggagagtatctccctcataaggaccttatg
aagatgatctagcaagcaatgtcatcaatacaactcctcccccgaaccga

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_42396141_42396926
seq2: B6Ng01-148H21.b_47_831

seq1  GAATTCTATGCAGTGATTGTTCAGGGCTAAGATTAAGACAAAGGAGAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGCAGTGATTGTTCAGGGCTAAGATTAAGACAAAGGAGAATT  50

seq1  ACGTTTTAGTATGCAGAGCTTCCACAGGATATTGAGATGTTTCTATCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTTTAGTATGCAGAGCTTCCACAGGATATTGAGATGTTTCTATCACA  100

seq1  GCCTACATCAGGAAATCCCTAATTTCAAATGGCAGGAACCCAGGAGGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTACATCAGGAAATCCCTAATTTCAAATGGCAGGAACCCAGGAGGAAT  150

seq1  GTGTCTCCTGCTTCTCAAGACCACAGACACCATCCTTTTTTACAAGGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTCCTGCTTCTCAAGACCACAGACACCATCCTTTTTTACAAGGAGC  200

seq1  TGCTGCAGGCTGCTGAGAGGTTTCCATTGTGACCTGTAGTGGGCAGTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCAGGCTGCTGAGAGGTTTCCATTGTGACCTGTAGTGGGCAGTCCC  250

seq1  TCTAATTTCATGCTCTCTCCATCACCCTTTAAATGTAAAAATACAGATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTTCATGCTCTCTCCATCACCCTTTAAATGTAAAAATACAGATAA  300

seq1  CCACTGCCAAACATTAGGCTGTGGTCAGAGAGTCTTGTGGAAGTGTTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGCCAAACATTAGGCTGTGGTCAGAGAGTCTTGTGGAAGTGTTGGT  350

seq1  GGAAGGGTTGTAGTAGCCAGAAGGGTTAGGAAGCCACAAGAGGAGCCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGTTGTAGTAGCCAGAAGGGTTAGGAAGCCACAAGAGGAGCCACA  400

seq1  GTCAACTAATCTGGGTTCTTGGGGTTCACAGAGACAGAACAATGAGCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACTAATCTGGGTTCTTGGGGTTCACAGAGACAGAACAATGAGCCAA  450

seq1  CACCATGTAGGGGCTTGAACAATAAATGAAACAGATGTACATCTTGGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGTAGGGGCTTGAACAATAAATGAAACAGATGTACATCTTGGTCT  500

seq1  TCATGTGGGTGACTAACAATTGGAGTGGGTGCTGCCTCGGATTTAGACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGGGTGACTAACAATTGGAGTGGGTGCTGCCTCGGATTTAGACTC  550

seq1  TGTTACTGAAAGAACCTAGTGGGGAAACCCCCACTCAATTTCCATTAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACTGAAAGAACCTAGTGGGGAAACCCCCACTCAATTTCCATTAGGT  600

seq1  GCGCACCCAAGAATCACGAACAGACGACTATCATGATGTAAATGCATGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCACCCAAGAATCACGAACAGACGACTATCATGATGTAAATGCATGAG  650

seq1  GTAGTTTAATGATGGAGCTCCGGGCAGACACGTATGTCCCGCAGGAGACA  700
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GTAGTTTAATGATGGAGCTCCGGGCAGACACGTATGTCCCGCA-GAGACA  699

seq1  GAGGTTTCGACCACATGGTGGAGCCATAATGGCGGAGCTCCGGTTCGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTTCGACCACATGGTGGAGCCATAATGGCGGAGCTCCGGTTCGAAA  749

seq1  CATATCTCACACAGGACACAGTGTTTTCCACCCCGA  786
      ||||||||||||||||||||||||||||||||||||
seq2  CATATCTCACACAGGACACAGTGTTTTCCACCCCGA  785