BAC Information

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BAC

Clone NameB6Ng01-148M20
Chromosome14 (Build37)
Map Location 74,412,215 - 74,413,206
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668489, Cysltr2, LOC100043149, Rcbtb2, Rb1, P2ry5, Itm2b, LOC100043152, Med4, Nudt15, Sucla2, LOC100043734, EG629578
Downstream geneLOC629583, Htr2a, LOC668508, Esd, Lrch1, ENSMUSG00000075519, LOC100043169, 5031414D18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148M20.bB6Ng01-148M20.g
ACCDH945311DH945312
length1,093996
definitionDH945311|Mus musculus domesticus DNA, BAC clone: B6Ng01-148M20, 5' end.DH945312|Mus musculus domesticus DNA, BAC clone: B6Ng01-148M20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaatttcgttgaagaattgagttggaattt
tgatgggggattgcatttgaatctgtagattgcttttggcaagatagcca
tttttacaatgttgatcctgccaatccatgagcatgggagatctttccat
cttctgagatcttctttaatttctttcttcagaggatttgaagtttttta
tcatacagatctttcacctccttagttagagtcacgccaagatattttat
atatttgtgactattggagaagggtgtgtttcccttagttctttctcagc
ctgttatctttgtatagaagaagggctcatggacttgttggagttatttt
atatttcagctaccttcacccgaagctgttatccaggtttgga
gaattcaggtttcactagtaggtgtcttcatttcaacagtaaagaactta
agaatgaatacaaatagaagcttggagacaaagaacagactcaaatagaa
gcccgagggtaatttattagagtatagaaggagaaccccaaggcagggaa
ccagtgaatctcctagctgcctggaggagaaacatggagaaatggaacac
tccttaagatatggttatacaccagaatggcccgcacgggagctttgggg
aaggagggaggtggccctaagcactgtttagggagtttagaagcatgctt
aggctctggaatgatcctacagcaaaaggcaaaagaaaaagaatcatcta
ctgcctcttagaatcaagctttaacactgtgggtagacacagctcaactt
catggcagcttgctggcttgcagggactgcagtagagggcaggcaggagt
tccagatgagaaaagaattgtgttagggtgaagttacctttctaagggct
ggtccccttgccaggtccctggttagattagattatgccataagggatga
gacaacggcaagtttccacctagatgcagaacctgtcctctttttaaatt
tttgatatatattgaatatatttatatggtaatatataaaacatgatgta
tcatatataaaaataaatatatgaatacattctttaaagtgtgccaaagt
aagtcttttgagaaatgtcccacttcatgcattttgtttttgctttgtaa
tctactaggtttaaccagggccattcacatgggcatgggtgtaacatcca
ctggaacatgattaaactcaaattttgcatgtcactaaagataatgacct
gtttttccctcagcaagccttcacctattttccatgctccttctctgtat
atggcagaatgcaggctaaactattcatttgtgaaatcatgctacttttg
agaggccattgtattttataaaacatattgctacttccttttaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_74412215_74413206
seq2: B6Ng01-148M20.g_68_1063

seq1  GAATTCAGGTTTCACTAGTAGGTGTCTTCATTTCAACAGTAAAGAACTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTTTCACTAGTAGGTGTCTTCATTTCAACAGTAAAGAACTTA  50

seq1  AGAATGAATACAAATAGAAGCTTGGAGACAAAGAACAGACTCAAATAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAATACAAATAGAAGCTTGGAGACAAAGAACAGACTCAAATAGAA  100

seq1  GCCCGAGGGTAATTTATTAGAGTATAGAAGGAGAACCCCAAGGCAGGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGAGGGTAATTTATTAGAGTATAGAAGGAGAACCCCAAGGCAGGGAA  150

seq1  CCAGTGAATCTCCTAGCTGCCTGGAGGAGAAACATGGAGAAATGGAACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGAATCTCCTAGCTGCCTGGAGGAGAAACATGGAGAAATGGAACAC  200

seq1  TCCTTAAGATATGGTTATACACCAGAATGGCCCGCACGGGAGCTTTGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAAGATATGGTTATACACCAGAATGGCCCGCACGGGAGCTTTGGGG  250

seq1  AAGGAGGGAGGTGGCCCTAAGCACTGTTTAGGGAGTTTAGAAGCATGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGGAGGTGGCCCTAAGCACTGTTTAGGGAGTTTAGAAGCATGCTT  300

seq1  AGGCTCTGGAATGATCCTACAGCAAAAGGCAAAAGAAAAAGAATCATCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCTGGAATGATCCTACAGCAAAAGGCAAAAGAAAAAGAATCATCTA  350

seq1  CTGCCTCTTAGAATCAAGCTTTAACACTGTGGGTAGACACAGCTCAACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCTTAGAATCAAGCTTTAACACTGTGGGTAGACACAGCTCAACTT  400

seq1  CATGGCAGCTTGCTGGCTTGCAGGGACTGCAGTAGAGGGCAGGCAGGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCAGCTTGCTGGCTTGCAGGGACTGCAGTAGAGGGCAGGCAGGAGT  450

seq1  TCCAGATGAGAAAAGAATTGTGTTAGGGTGAAGTTACCTTTCTAAGGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGATGAGAAAAGAATTGTGTTAGGGTGAAGTTACCTTTCTAAGGGCT  500

seq1  GGTCCCCTTGCCAGGTCCCTGGTTAGATTAGATTATGCCATAAGGGATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCCTTGCCAGGTCCCTGGTTAGATTAGATTATGCCATAAGGGATGA  550

seq1  GACAACGGCAAGTTTCCACCTAGATGCAGAACCTGTCCTCTTTTTAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACGGCAAGTTTCCACCTAGATGCAGAACCTGTCCTCTTTTTAAATT  600

seq1  TTTGATATATATTGAATATA-TTATATGGTAATATATAAAACATGATGTA  649
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTTGATATATATTGAATATATTTATATGGTAATATATAAAACATGATGTA  650

seq1  TCATATATAAAAATAAATATATGAATACATTCTTTAAAGTGTGCCAAAGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATATAAAAATAAATATATGAATACATTCTTTAAAGTGTGCCAAAGT  700

seq1  AAGTCTTTTGAGAAATGTCCCACTTCATGCATTTTGTTTTTGCTTTGTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTTTTGAGAAATGTCCCACTTCATGCATTTTGTTTTTGCTTTGTAA  750

seq1  TCTACTAGGTTTAACCAGGGCCATTCACATGGGCATGGGTGTAACATCCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTAGGTTTAACCAGGGCCATTCACATGGGCATGGGTGTAACATCCA  800

seq1  CTGGAACATGATT-AACTCAAATATTGCATGTCACTAAAGATAATGACCT  848
      ||||||||||||| ||||||||| ||||||||||||||||||||||||||
seq2  CTGGAACATGATTAAACTCAAATTTTGCATGTCACTAAAGATAATGACCT  850

seq1  G-TTTTCCCTCAGC-AGCCTTCACCTATTTCCCATGCTCCTTCTCTGTAT  896
      | |||||||||||| ||||||||||||||| |||||||||||||||||||
seq2  GTTTTTCCCTCAGCAAGCCTTCACCTATTTTCCATGCTCCTTCTCTGTAT  900

seq1  ATGGCAGAATGCAGGCTAAACTATTCATTGTTGAAATCATGCTACTTTTG  946
      |||||||||||||||||||||||||||||  |||||||||||||||||||
seq2  ATGGCAGAATGCAGGCTAAACTATTCATTTGTGAAATCATGCTACTTTTG  950

seq1  AGAAGCCATTGTAATTTATTAAACATATTGCTACTTCTTTTTAGGT  992
      ||| ||||||||| ||||| ||||||||||||||||| ||||||||
seq2  AGAGGCCATTGTATTTTATAAAACATATTGCTACTTCCTTTTAGGT  996