BAC Information

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BAC

Clone NameB6Ng01-149C13
Chromosome14 (Build37)
Map Location 29,191,450 - 29,318,747
singlet/doubletdoublet
Overlap geneErc2, LOC100040206, Wnt5a
Upstream geneArhgef3, Ccdc66, LOC665370
Downstream geneLOC100040218, Cacna2d3, Lrtm1, Ppia-ps15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149C13.bB6Ng01-149C13.g
ACCDH945573DH945574
length1,078990
definitionDH945573|Mus musculus domesticus DNA, BAC clone: B6Ng01-149C13, 5' end.DH945574|Mus musculus domesticus DNA, BAC clone: B6Ng01-149C13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,191,450 - 29,192,532)(29,317,757 - 29,318,747)
sequence
gaattccttaagttatctctgaagctgaatctaaccagagccagggtctg
accattttagagccaagatgattcaaatctattgaagtaacttgggtttc
tttataatgctccattccttctgagccatgaacaatcatttcttgactta
actctgctttggtcttggattaggatttaccctatttaacaaattatggg
ggggggagaatattagagccattccctagtatacccaggccttaagttac
actgaaaaatgtctgccaccatagaatatgacaatcattaaaaaaaccaa
aaccctcaaggtatgggttagctggttatatctgaatttcagatgagcaa
caaatacttttttatcagtcctcaagaaggaaaaatatgggttcttgact
accactatatgcatatttttcttggggtctggagagcatgttctgtttgc
agaagacttgtgattctgttccccgtgtccacatggggaccaataggagc
tgtaactccagtttgaaggggtctgaacaccctcttctattctcctcagg
cgcgcacgtggtatatatacatacctgtaggccaaacactcctacacata
aaaagtaaaaagtaaaatataaataaatgaatgcactgctgacaagagca
gagggcctgtgaagggggaacacactggtctataagaacaccacagtgcc
tattaaacgctaagcttgcagggccaagttcctttagggttaacccccag
cctctggaagcaactgttgcttataggacttatgagaacctttgtggctt
ttgccggaacagtggttctcaaccttcctcacactgtgacactttaatcc
ctcagttgtgatgacaccccaaccataagatcacttcattgctacgttat
ctgtaattttgctgctgcactgtaaatatctgctatgcaggacatctgat
atggcaccctgtcagggtcgagacccactgctgagactcctggactaaaa
cctcaagccagctctcctctgtttcctctgcttattctaatgtgatttaa
tgaaagtggggtggggagggcaataaga
gaattctgcagactccaggcggctcacgcctcctgattgtcagctcctcc
tctctgggtctgtggccgaaacgtctgcttccagggactgctcctgcagc
tgagttagctagtgaacctctgtgtacacacagacacacacccaaacaca
cacacatacacacacacaaacgcacacacacgcagacacagagacacgcg
ctcacacacacacacagacacacacacacacacacagagcagcagcagcg
gcggcggctatgggaccacagaacaatcaggcacgcatggttttttctcc
gggagatgccgctgaaatcgcacaagtcgccatcagagctgcaagagtca
gcgccaaattttgtcctttcattttagagtctggcaaaaaccaggcgcaa
agaaaatgggttcaaggcagccctgaactttctgccgcttggtggcttga
gcggttgatggacagctagcctgtgggggaacgttggcttcccccttctg
gtccccttctttctttcttcctttcttcgggttaaccttcttctttccac
ccccccgcctttccagagagaacagagcgagaggacggagggcgcagagc
tccgcggtggcgactcaactccagaggtccatggcggccgaggctgccca
cctcctcggtcgcggccggggtccgaggggcggtcgtggggcccggcgga
ggccgcggaaggagatggcaatgcagcggccgcacaatccggactccgga
cggcggaggcggtgcctcggagcctgcagcaactttccaagcgatgcggt
gccccacagactgactggcccagcgaggggaccgcgtgccccccaccccc
ggccctcctgaccagctccctcactttcgccttccctctctccagactcc
tctttcccttggtggtctcagcgaaaaaaaattattttttaaagttgcag
accaaacacggctggagaggcaatgggggtggggggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_29191450_29192532
seq2: B6Ng01-149C13.b_47_1124

seq1  GAATTCCTTAAGTTATCTCTGAAGCTGAATCTAACCAGAGCCAGGGTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAAGTTATCTCTGAAGCTGAATCTAACCAGAGCCAGGGTCTG  50

seq1  ACCATTTTAGAGCCAAGATGATTCAAATCTATTGAAGTAACTTGGGTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTTAGAGCCAAGATGATTCAAATCTATTGAAGTAACTTGGGTTTC  100

seq1  TTTATAATGCTCCATTCCTTCTGAGCCATGAACAATCATTTCTTGACTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAATGCTCCATTCCTTCTGAGCCATGAACAATCATTTCTTGACTTA  150

seq1  ACTCTGCTTTGGTCTTGGATTAGGATTTACCCTATTTAACAAATTATGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCTTTGGTCTTGGATTAGGATTTACCCTATTTAACAAATTATGGG  200

seq1  GGGGGGAGAATATTAGAGCCATTCCCTAGTATACCCAGGCCTTAAGTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGAGAATATTAGAGCCATTCCCTAGTATACCCAGGCCTTAAGTTAC  250

seq1  ACTGAAAAATGTCTGCCACCATAGAATATGACAATCATTAAAAAAACCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAAAATGTCTGCCACCATAGAATATGACAATCATTAAAAAAACCAA  300

seq1  AACCCTCAAGGTATGGGTTAGCTGGTTATATCTGAATTTCAGATGAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTCAAGGTATGGGTTAGCTGGTTATATCTGAATTTCAGATGAGCAA  350

seq1  CAAATACTTTTTTATCAGTCCTCAAGAAGGAAAAATATGGGTTCTTGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACTTTTTTATCAGTCCTCAAGAAGGAAAAATATGGGTTCTTGACT  400

seq1  ACCACTATATGCATATTTTTCTTGGGGTCTGGAGAGCATGTTCTGTTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTATATGCATATTTTTCTTGGGGTCTGGAGAGCATGTTCTGTTTGC  450

seq1  AGAAGACTTGTGATTCTGTTCCCCGTGTCCACATGGGGACCAATAGGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACTTGTGATTCTGTTCCCCGTGTCCACATGGGGACCAATAGGAGC  500

seq1  TGTAACTCCAGTTTGAAGGGGTCTGAACACCCTCTTCTATTCTCCTCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACTCCAGTTTGAAGGGGTCTGAACACCCTCTTCTATTCTCCTCAGG  550

seq1  CGCGCACGTGGTATATATACATACCTGTAGGCCAAACACTCCTACACATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGCACGTGGTATATATACATACCTGTAGGCCAAACACTCCTACACATA  600

seq1  AAAAGTAAAAAGTAAAATATAAATAAATGAATGCACTGCTGACAAGAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAAAAAGTAAAATATAAATAAATGAATGCACTGCTGACAAGAGCA  650

seq1  GAGGGCCTGTGAAGGGGGAACACACTGGTCTATAAGAACACCACAGTGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCCTGTGAAGGGGGAACACACTGGTCTATAAGAACACCACAGTGCC  700

seq1  TATTAAACGCTAAGCTTGCAGGGCCAAGTTCCTTTAGGGTTAACCCCCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAACGCTAAGCTTGCAGGGCCAAGTTCCTTTAGGGTTAACCCCCAG  750

seq1  CCTCTGGAAGCAACTGTTGCTTATAGGACTTATGAGAACCTTTGTGGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGAAGCAACTGTTGCTTATAGGACTTATGAGAACCTTTGTGGCTT  800

seq1  TTGCCGGAACAGTGGTTCTCAACCTTCCTCACACTGTGACACTTTAATCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCGGAACAGTGGTTCTCAACCTTCCTCACACTGTGACACTTTAATCC  850

seq1  CTCAGGTTGTGATGACACCCCAACCATAAGATCACTTCATTGCTACGTTA  900
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCA-GTTGTGATGACACCCCAACCATAAGATCACTTCATTGCTACGTTA  899

seq1  TCTGTAATTTTGCTGCTGCACTGTAAATATCTGCTATGCAGGACATCTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAATTTTGCTGCTGCACTGTAAATATCTGCTATGCAGGACATCTGA  949

seq1  TATGCCACCCCTGTCAGGGGTCGAGACCCACAGGCTGAGAACTCCTGGAC  1000
      |||| || |||||||| ||||||||||||||  |||||| ||||||||||
seq2  TATGGCA-CCCTGTCA-GGGTCGAGACCCAC-TGCTGAG-ACTCCTGGAC  995

seq1  TAAAACCTCAAGCCAAGCTCTTCTCTGTTT-CTCTGCCTATTCCAAATGT  1049
      |||||||||||||| |||||| |||||||| |||||| |||| | |||||
seq2  TAAAACCTCAAGCC-AGCTCTCCTCTGTTTCCTCTGCTTATT-CTAATGT  1043

seq1  GATTTAATGAAAGGTGGGT-GGGAGGGCAATAAGA  1083
      |||||||||||||  |||| |||||||||||||||
seq2  GATTTAATGAAAGTGGGGTGGGGAGGGCAATAAGA  1078

seq1: chr14_29317757_29318747
seq2: B6Ng01-149C13.g_68_1057 (reverse)

seq1  TCCCCCCCCCACCCCCCTTTGCCTCTCCAGCCGTGTTTGGTTCTGCAACT  50
      ||||||||||| ||||| |||||||||||||||||||||| |||||||||
seq2  TCCCCCCCCCA-CCCCCATTGCCTCTCCAGCCGTGTTTGG-TCTGCAACT  48

seq1  TT-AAAAATATTTTTTTTTCGCTGAGAACACCAAGGGAAAGAGGAGTCTG  99
      || ||||||| |||||||||||||||| ||||||||||||||||||||||
seq2  TTAAAAAATAATTTTTTTTCGCTGAGACCACCAAGGGAAAGAGGAGTCTG  98

seq1  GAGAGAGGGAGGGCGAAAGTGAGGGAGCTGGTCAGGAGGGCCGGGGGTGG  149
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGGGAAGGCGAAAGTGAGGGAGCTGGTCAGGAGGGCCGGGGGTGG  148

seq1  GGGGCACGCGGTCCCCTCGCTGGGCCAGTCAGTCTGTGGGGCACCGCATC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCACGCGGTCCCCTCGCTGGGCCAGTCAGTCTGTGGGGCACCGCATC  198

seq1  GCTTGGAAAGTTGCTGCAGGCTCCGAGGCACCGCCTCCGCCGTCCGGAGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGAAAGTTGCTGCAGGCTCCGAGGCACCGCCTCCGCCGTCCGGAGT  248

seq1  CCGGATTGTGCGGCCGCTGCATTGCCATCTCCTTCCGCGGCCTCCGCCGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGATTGTGCGGCCGCTGCATTGCCATCTCCTTCCGCGGCCTCCGCCGG  298

seq1  GCCCCACGACCGCCCCTCGGACCCCGGCCGCGACCGAGGAGGTGGGCAGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCACGACCGCCCCTCGGACCCCGGCCGCGACCGAGGAGGTGGGCAGC  348

seq1  CTCGGCCGCCATGGACCTCTGGAGTTGAGTCGCCACCGCGGAGCTCTGCG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGCCGCCATGGACCTCTGGAGTTGAGTCGCCACCGCGGAGCTCTGCG  398

seq1  CCCTCCGTCCTCTCGCTCTGTTCTCTCTGGAAAGGCGGGGGGGTGGAAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCGTCCTCTCGCTCTGTTCTCTCTGGAAAGGCGGGGGGGTGGAAAG  448

seq1  AAGAAGGTTAACCCGAAGAAAGGAAGAAAGAAAGAAGGGGACCAGAAGGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGGTTAACCCGAAGAAAGGAAGAAAGAAAGAAGGGGACCAGAAGGG  498

seq1  GGAAGCCAACGTTCCCCCACAGGCTAGCTGTCCATCAACCGCTCAAGCCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCCAACGTTCCCCCACAGGCTAGCTGTCCATCAACCGCTCAAGCCA  548

seq1  CCAAGCGGCAGAAAGTTCAGGGCTGCCTTGAACCCATTTTCTTTGCGCCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCGGCAGAAAGTTCAGGGCTGCCTTGAACCCATTTTCTTTGCGCCT  598

seq1  GGTTTTTGCCAGACTCTAAAATGAAAGGACAAAATTTGGCGCTGACTCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTGCCAGACTCTAAAATGAAAGGACAAAATTTGGCGCTGACTCTT  648

seq1  GCAGCTCTGATGGCGACTTGTGCGATTTCAGCGGCATCTCCCGGAGAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTCTGATGGCGACTTGTGCGATTTCAGCGGCATCTCCCGGAGAAAA  698

seq1  AACCATGCGTGCCTGATTGTTCTGTGGTCCCATAGCCGCCGCCGCTGCTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATGCGTGCCTGATTGTTCTGTGGTCCCATAGCCGCCGCCGCTGCTG  748

seq1  CTGCTCTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTGTGAGCGCGTGTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTGTGAGCGCGTGTC  798

seq1  TCTGTGTCTGCGTGTGTGTGCGTTTGTGTGTGTGTATGTGTGTGTGTTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTCTGCGTGTGTGTGCGTTTGTGTGTGTGTATGTGTGTGTGTTTG  848

seq1  GGTGTGTGTCTGTGTGTACACAGAGGTTCACTAGCTAACTCAGCTGCAGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGTGTCTGTGTGTACACAGAGGTTCACTAGCTAACTCAGCTGCAGG  898

seq1  AGCAGTCCCTGGAAGCAGACGTTTCGGCCACAGACCCAGAGAGGAGGAGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTCCCTGGAAGCAGACGTTTCGGCCACAGACCCAGAGAGGAGGAGC  948

seq1  TGACAATCAGGAGGCGTGAGCCGCCTGGAGTCTGCAGAATTC  991
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATCAGGAGGCGTGAGCCGCCTGGAGTCTGCAGAATTC  990