BAC Information

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BAC

Clone NameB6Ng01-149I13
Chromosome14 (Build37)
Map Location 49,259,566 - 49,432,855
singlet/doubletdoublet
Overlap geneOtx2, LOC100041864
Upstream geneKtn1, 4930447J18Rik, Map1lc3-ps2, Peli2, EG624367, LOC100041831, 6720456H20Rik, 4930572G02Rik
Downstream geneLOC666972, Exoc5, 4932432K03Rik, LOC218997, Nat12, 1700011H14Rik, Slc35f4, 3632451O06Rik, LOC667006
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149I13.bB6Ng01-149I13.g
ACCDH945849DH945850
length789860
definitionDH945849|Mus musculus domesticus DNA, BAC clone: B6Ng01-149I13, 5' end.DH945850|Mus musculus domesticus DNA, BAC clone: B6Ng01-149I13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(49,432,068 - 49,432,855)(49,259,566 - 49,260,426)
sequence
gaattcaactccggtttgagccgcagaataaaaatgagcaaactgtatta
tctgctgccacctaatctgggttgaatttcctctgtatctttttttgttt
gttgaagaatccttttcttgagtctccttggccattgacaaggtcttttg
agatgaatatgaaaagatagatttaaaggttaaggccagggtcagatggt
tgcagatgttttgtgagagattgttcggttcagtttggggtactcctcct
gactaaggtatttcaaactgccagactcatggccagccaccactgaagac
tgttgtttgtctcacgattgatccaacacaaatgaggaataggagtgttt
gttttgtttctttctttcttcagtggataattccctgcgcatgccccctg
ggggctggggggaaggcaaagactgtctaaagccagagaaggtgttgttt
ttattcttagaatgtagactattttaggttttgttcttcaaatgatcatg
ggagaccctttttttttttttttcaaataaagatgaagaatagcatgtga
cagaaatcgattacattcaaaaggttgtaaagttgctggaagagaaaaaa
tataaaggaaagtgataacttatctcttgtctcctgacttcagattctaa
tttaccaaatgatatggaaatgaaggggcaagaactaatgtaggtgacac
tagttgtcattgggaattccactatttgatagacttatatcaaaccatag
tcagaatacataggtatttaggtggtggtggtttgtgca
gaattcaaggcttagctagttgtttttggctccaaataaaatacaacagt
aggactgggttacagatcagtagcaggacatttgactaacgtgcacaaag
ccctgggttcaatcccagatactgtgagggttgggcggaggggttcagag
gcagtttcttctctattaatattagagtcgtctattagagggctggagag
atggctcaatggttaagagcacttgctgctctggctcaagacctgggctc
agttctcagcattcgcatagtcacttgtaactccagtttctggggattgc
actcttctccgaccttctcaggtaccagcaagtacaggatacacatgcac
acatgcagacaaacacccatactcatacaacagaaatataaaaaagaata
cttagtagatgttgggtgtaaattttaatggctcagcggaatgctagtat
ttaatattctaaatgctttccttcttggccgaatgtttttctgaagtgtg
cttactatctctgagaaagtccttcgtggtcacttttactgcctgatgta
ttctgttggctctctctctttactgctgccctaagtggcaagcagcagcc
tggtagcttggaggtatccacagctgtgcatcttgtgtattggacaaaca
gccccacagcaggctatggagacagctgtccgtgcttcttcagggaacca
ggaacaaagaaaactacagcaaagcaatgaagtagtacattgcaggcaag
cactccaccaagttacagttccagcttctaattctaaattctcccaacct
caatcttactcatccccccaacttccaccctactcaccttccatcctccc
ccatccgact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_49432068_49432855
seq2: B6Ng01-149I13.b_45_833 (reverse)

seq1  TGCACAAACCACCACCACCTAAATACCTATGTATTCTGACTATGGTTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAAACCACCACCACCTAAATACCTATGTATTCTGACTATGGTTTGA  50

seq1  TATAAGTCTATCAAATAGTGGAATTCCCAATGACAACTAGTGTCACCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGTCTATCAAATAGTGGAATTCCCAATGACAACTAGTGTCACCTAC  100

seq1  ATTAGTTCTTGCCCCTTCATTTCCATATCATTTGGT-AATTAGAATCTGA  149
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATTAGTTCTTGCCCCTTCATTTCCATATCATTTGGTAAATTAGAATCTGA  150

seq1  AGTCAGGAGACAAGAGATAAGTTATCACTTTCCTTTATATTTTTTCTCTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGGAGACAAGAGATAAGTTATCACTTTCCTTTATATTTTTTCTCTT  200

seq1  CCAGCAACTTTACAACCTTTTGAATGTAATCGATTTCTGTCACATGCTAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAACTTTACAACCTTTTGAATGTAATCGATTTCTGTCACATGCTAT  250

seq1  TCTTCATCTCTATTTGAAAAAAAAAAAAAAAGGGTCTCCCATGATCATTT  299
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATCTTTATTTGAAAAAAAAAAAAAAAGGGTCTCCCATGATCATTT  300

seq1  GAAGAACAAAACCTAAAATAGTCTACATTCTAAGAATAAAAACAACACCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAACAAAACCTAAAATAGTCTACATTCTAAGAATAAAAACAACACCT  350

seq1  TCTCTGGCTTTAGACAGTCTTTGCCTTCCCCCCAGCCCCCAGGGGGCATG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGCTTTAGACAGTCTTTGCCTTCCCCCCAGCCCCCAGGGGGCATG  400

seq1  CGCAGGGAATTATCCACTGAAGAAAGAAAGAAACAAAACAAACACTCCTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGGGAATTATCCACTGAAGAAAGAAAGAAACAAAACAAACACTCCTA  450

seq1  TTCCTCATTTGTGTTGGATCAATCGTGAGACAAACAACAGTCTTCAGTGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCATTTGTGTTGGATCAATCGTGAGACAAACAACAGTCTTCAGTGG  500

seq1  TGGCTGGCCATGAGTCTGGCAGTTTGAAATACCTTAGTCAGGAGGAGTAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGGCCATGAGTCTGGCAGTTTGAAATACCTTAGTCAGGAGGAGTAC  550

seq1  CCCAAACTGAACCGAACAATCTCTCACAAAACATCTGCAACCATCTGACC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAACTGAACCGAACAATCTCTCACAAAACATCTGCAACCATCTGACC  600

seq1  CTGGCCTTAACCTTTAAATCTATCTTTTCATATTCATCTCAAAAGACCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTTAACCTTTAAATCTATCTTTTCATATTCATCTCAAAAGACCTT  650

seq1  GTCAATGGCCAAGGAGACTCAAGAAAAGGATTCTTCAACAAACAAAAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATGGCCAAGGAGACTCAAGAAAAGGATTCTTCAACAAACAAAAAAA  700

seq1  GATACAGAGGAAATTCAACCCAGATTAGGTGGCAGCAGATAATACAGTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAGAGGAAATTCAACCCAGATTAGGTGGCAGCAGATAATACAGTTT  750

seq1  GCTCATTTTTATTCTGCGGCTCAAACCGGAGTTGAATTC  788
      |||||||||||||||||||||||||||||||||||||||
seq2  GCTCATTTTTATTCTGCGGCTCAAACCGGAGTTGAATTC  789

seq1: chr14_49259566_49260426
seq2: B6Ng01-149I13.g_69_928

seq1  GAATTCAAGGCTTAGCTAGTTGTTTTTGGCTCCAAATAAAATACAACAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGCTTAGCTAGTTGTTTTTGGCTCCAAATAAAATACAACAGT  50

seq1  AGGACTGGGTTACAGATCAGTAGCAGGACATTTGACTAACGTGCACAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGGGTTACAGATCAGTAGCAGGACATTTGACTAACGTGCACAAAG  100

seq1  CCCTGGGTTCAATCCCAGATACTGTGAGGGTTGGGCGGAGGGGTTCAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGTTCAATCCCAGATACTGTGAGGGTTGGGCGGAGGGGTTCAGAG  150

seq1  GCAGTTTCTTCTCTATTAATATTAGAGTCGTCTATTAGAGGGCTGGAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTCTTCTCTATTAATATTAGAGTCGTCTATTAGAGGGCTGGAGAG  200

seq1  ATGGCTCAATGGTTAAGAGCACTTGCTGCTCTGGCTCAAGACCTGGGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCAATGGTTAAGAGCACTTGCTGCTCTGGCTCAAGACCTGGGCTC  250

seq1  AGTTCTCAGCATTCGCATAGTCACTTGTAACTCCAGTTTCTGGGGATTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCAGCATTCGCATAGTCACTTGTAACTCCAGTTTCTGGGGATTGC  300

seq1  ACTCTTCTCCGACCTTCTCAGGTACCAGCAAGTACAGGATACACATGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTCTCCGACCTTCTCAGGTACCAGCAAGTACAGGATACACATGCAC  350

seq1  ACATGCAGACAAACACCCATACTCATACAACAGAAATATAAAAAAGAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCAGACAAACACCCATACTCATACAACAGAAATATAAAAAAGAATA  400

seq1  CTTAGTAGATGTTGGGTGTAAATTTTAATGGCTCAGCGGAATGCTAGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTAGATGTTGGGTGTAAATTTTAATGGCTCAGCGGAATGCTAGTAT  450

seq1  TTAATATTCTAAATGCTTTCCTTCTTGGCCGAATGTTTTTCTGAAGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATTCTAAATGCTTTCCTTCTTGGCCGAATGTTTTTCTGAAGTGTG  500

seq1  CTTACTATCTCTGAGAAAGTCCTTCGTGGTCACTTTTACTGCCTGATGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTATCTCTGAGAAAGTCCTTCGTGGTCACTTTTACTGCCTGATGTA  550

seq1  TTCTGTTGGCTCTCTCTCTTTACTGCTGCCCTAAGTGGCAAGCAGCAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTGGCTCTCTCTCTTTACTGCTGCCCTAAGTGGCAAGCAGCAGCC  600

seq1  TGGTAGCTTGGAGGTATCCACAGCTGTGCATCTTGTGTATTGGACAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGCTTGGAGGTATCCACAGCTGTGCATCTTGTGTATTGGACAAACA  650

seq1  GCCCCACAGCAGGCTATGGAGACAGCTGTCCGTGCTTCTTCAGGGAACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCACAGCAGGCTATGGAGACAGCTGTCCGTGCTTCTTCAGGGAACCA  700

seq1  GGAACAAAGAAAACTACAGCAAAGCAATGAAGTAGTACATTGCAGGCAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAAAGAAAACTACAGCAAAGCAATGAAGTAGTACATTGCAGGCAAG  750

seq1  CACTCCACCAAGTTACAGTTCCAGCTTTCTAATTCTAAATTCTCCCAACC  800
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CACTCCACCAAGTTACAGTTCCAGC-TTCTAATTCTAAATTCTCCCAACC  799

seq1  TCAATCTTACTCATCCCCCCAACTCCCACCCTACTCACCTTCCACCCTCC  850
      |||||||||||||||||||||||| ||||||||||||||||||| |||||
seq2  TCAATCTTACTCATCCCCCCAACTTCCACCCTACTCACCTTCCATCCTCC  849

seq1  CCCACCCGACT  861
      |||| ||||||
seq2  CCCATCCGACT  860