BAC Information

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BAC

Clone NameB6Ng01-150C06
Chromosome14 (Build37)
Map Location 43,247,839 - 43,249,000
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666155, EG666156, LOC100040642, LOC100041729, LOC624277, LOC100041810, EG666186, LOC100041722, LOC100041841, EG666207, LOC666214, LOC632737, EG623168, LOC100041849, 1700016D02Rik, LOC100040726, LOC666228, LOC666233, LOC100041930, EG666152, EG385234, LOC100041950, LOC100041910, LOC674032, EG666239, LOC100040759, LOC100040771, EG666253, EG666264, LOC100040787, EG666280, EG666285, LOC666298, LOC100042031
Downstream geneEG666318, EG546249, LOC100040863, LOC100040875, LOC100040890, LOC100042055, LOC635209, 1700091H14Rik, EG666415, LOC100040976, LOC100040983, LOC100042114, LOC666370, EG666376, LOC100041025, EG666396, LOC100041046, LOC100042130, LOC624893, LOC100041069, EG666420, LOC666436, EG638353, LOC666454, LOC100041106, EG638262, EG640992, EG666471, LOC666481, LOC100041143, EG666485, 1700049E17Rik, LOC666492, 1700001F09Rik, LOC673380, LOC100042326, EG666502, LOC545039, LOC100041227, LOC100041235, LOC100042342, LOC666322, EG666556
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150C06.bB6Ng01-150C06.g
ACCDH946297DH946298
length1,140816
definitionDH946297|Mus musculus domesticus DNA, BAC clone: B6Ng01-150C06, 5' end.DH946298|Mus musculus domesticus DNA, BAC clone: B6Ng01-150C06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaatttagaccatgatgccccgagcttaaagaaaaccatctct
gcctgtgaattctggggctccaggagtgtgacaccatacctggctaaaaa
cactggcctaagagtgaaggctttggacttgttttctgtttgtttgtttg
tttgtttgttttactgtttttttaattaggtattttcctcatttacattt
ccaatgctataccaaaagtcccccatacttcccccccacactaccctacc
aacccactcccactttttggccctggcattcccctgtactggggcatata
aagtttgcaagtccaatgggcctctctttccagtgatggccgactaggcc
atcttttgatacatatgcagatagagtcaagagctccgggatactggtta
gttcataacgttgttccacccatagggttgcagatcccttcagctccttg
ggtattttctctagctcctccattgggggccctgtgatccatccaatagc
tgactgtgagcatccacttatgtgtttgctaggtccaggtgtagtctcac
tagagacagctataccagggtcctatcagcaaaatcttgctagtgtatgc
aatggtgtcagcatttggaggctgattatgggatggatccctggatatgg
tagtctctagtccttttgtctcatctccaaactttgtctctgtaacttct
tccatgggtgtttaatacataaaaatgtagatatttcactcagtacggat
ttaaaaagaacctctactcagctggatcagtatatgcagtgtatatagct
tcagcaaaatatccaaataaacgaccagaagaaaggaagagaaaataaat
atcaaatcccttaaatcataccaccaaaattctaagccccaaagcaacaa
acccaaccacatcaacaaacaaatatcagttaaactgtattctcttgggg
cagtttagtggcactgactacacatgtggtcaatcttgagacaggtagta
aggcagtttcagatgtatagcctatcaaggcagtgttgccattgtttctt
tgggggctttgtagttagtcttctaaggacaggatgagactattcaggaa
tttgcttcaagtctttacttacttactacctcccttaaat
gaattcaagaagttactctccagagatcctaataaccctattaaagaatg
gggtacagagctaaacagaaaattctcaactgatgaatcttgaatggctg
agatgtacttaagaaatgttcaacatctttagtcatcagggaaatgcaaa
tcaaattgaccctaagtttccacttcacagcactcagatgggacaagaac
aaaactcagctgacaggtgattctggcaagaatgtgaagaaagaagaaca
tccctccattcctgctgggactgcaagttggaaaaaccactttggagatc
aatctggcaattcttgagaaagttggaaatggttctacctcaagtacagg
tataccaccatggtacatatacccaaaagattctccaatgtattaaaaag
acacatgcaccactatgttcatagcagccttatttataatgaccagactc
tgaaaacaacccagatgtccctcacagaagaatagatacagaaaatattg
tacagtgtacaggagtactactcagcctttaaaaacattacttcatgaaa
ttcaaaggccaatgtttggaagttgaaatatcatcatgagtgtggtatcc
tagtcacaaaaggatacacatggtatgtagttattgataagtggaaattg
gtcaaaaaatgcatggaatgcccacaatacaactaacagaccacgggaaa
ccagagaagaaggaagatcacaccagagtgtgaatgctacagttctactc
agaagggggaagcaaagaatgtttggaagtaggaggagagaaggatctgg
gagggagagaagagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_43247839_43249000
seq2: B6Ng01-150C06.b_48_1187

seq1  GAATTCTTAATTTAGACCATGATGCCCCGAGCTTAAAGAAAACCATCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAATTTAGACCATGATGCCCCGAGCTTAAAGAAAACCATCTCT  50

seq1  GCCTGTGAATTCTGGGGCTCCAGGAGTGTGACACCATACCTGGCTAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTGAATTCTGGGGCTCCAGGAGTGTGACACCATACCTGGCTAAAAA  100

seq1  CACTGGCCTAAGAGTGAAGGCTTTGGACTTGTTTTCTGTTTGTTTGTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGCCTAAGAGTGAAGGCTTTGGACTTGTTTTCTGTTTGTTTGTTTG  150

seq1  TTTGTTTGTTTTACTGTTTTTTTAATTAGGTATTTTCCTCATTTACATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTTTTACTGTTTTTTTAATTAGGTATTTTCCTCATTTACATTT  200

seq1  CCAATGCTATACCAAAAGTCCCCCATACTTCCCCCCCACACTACCCTACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGCTATACCAAAAGTCCCCCATACTTCCCCCCCACACTACCCTACC  250

seq1  AACCCACTCCCACTTTTTGGCCCTGGCATTCCCCTGTACTGGGGCATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCACTCCCACTTTTTGGCCCTGGCATTCCCCTGTACTGGGGCATATA  300

seq1  AAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCC  350

seq1  ATCTTTTGATACATATGCAGATAGAGTCAAGAGCTCCGGGATACTGGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTGATACATATGCAGATAGAGTCAAGAGCTCCGGGATACTGGTTA  400

seq1  GTTCATAACGTTGTTCCACCCATAGGGTTGCAGATCCCTTCAGCTCCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATAACGTTGTTCCACCCATAGGGTTGCAGATCCCTTCAGCTCCTTG  450

seq1  GGTATTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAATAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAATAGC  500

seq1  TGACTGTGAGCATCCACTTATGTGTTTGCTAGGTCCAGGTGTAGTCTCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTGAGCATCCACTTATGTGTTTGCTAGGTCCAGGTGTAGTCTCAC  550

seq1  TAGAGACAGCTATACCAGGGTCCTATCAGCAAAATCTTGCTAGTGTATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGACAGCTATACCAGGGTCCTATCAGCAAAATCTTGCTAGTGTATGC  600

seq1  AATGGTGTCAGCATTTGGAGGCTGATTATGGGATGGATCCCTGGATATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTGTCAGCATTTGGAGGCTGATTATGGGATGGATCCCTGGATATGG  650

seq1  TAGTCTCTAGTCCTTTTGTCTCAGCTCCAAACTTTGTCTCTGTAACTTCT  700
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TAGTCTCTAGTCCTTTTGTCTCATCTCCAAACTTTGTCTCTGTAACTTCT  700

seq1  TCCATGGGTGTTTAATACATAAAAATGTAGATATTTCACTCAGTACGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGGGTGTTTAATACATAAAAATGTAGATATTTCACTCAGTACGGAT  750

seq1  TTAAAAAGAACCTCTACTCAGCTGGATCAGTATATGCAGTGTATATAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAGAACCTCTACTCAGCTGGATCAGTATATGCAGTGTATATAGCT  800

seq1  TCAGCAAAATATCCAAAT-AACGACCAGAAAAAAGGAAGAGAAAATAAAT  849
      |||||||||||||||||| ||||||||||| |||||||||||||||||||
seq2  TCAGCAAAATATCCAAATAAACGACCAGAAGAAAGGAAGAGAAAATAAAT  850

seq1  ATCAAAT-CCTTAAATCAATACCACCAAAATTCTAAGCCCCAAAGCAAAC  898
      ||||||| ||||||||| |||||||||||||||||||||||||||| |||
seq2  ATCAAATCCCTTAAATC-ATACCACCAAAATTCTAAGCCCCAAAGC-AAC  898

seq1  AAAACCCAAACCAACAATCAAACAAACAAAATATCAAGTTAAACTGTATT  948
      |||  || |||||   ||| ||||||| ||||||| ||||||||||||||
seq2  AAA--CCCAACCA--CATC-AACAAAC-AAATATC-AGTTAAACTGTATT  941

seq1  CTCTTGGGGCAGTTTAGTGGCACTGAACTACAACATGTGGTCAATCTTGA  998
      ||||||||||||||||||||||||| ||||| ||||||||||||||||| 
seq2  CTCTTGGGGCAGTTTAGTGGCACTG-ACTAC-ACATGTGGTCAATCTTG-  988

seq1  AGACAAGGTAGTAAGGCAGTTTCAGATGTAATAGCCTATCAAGGCAAGTG  1048
      |||| |||||||||||||||||||||||| ||||||||||||||| ||||
seq2  AGAC-AGGTAGTAAGGCAGTTTCAGATGT-ATAGCCTATCAAGGC-AGTG  1035

seq1  TTGCCA-TGTTTCTTTGGGGGCTTTGTAAGTTAAGTCTTCATAGGACAAG  1097
      |||||| |||||||||||||||||||| |||| |||||||  ||||| ||
seq2  TTGCCATTGTTTCTTTGGGGGCTTTGT-AGTT-AGTCTTCTAAGGAC-AG  1082

seq1  GATGAGACATATTACAGGATTTTGCTCAAAGTCTTTTAACTTTACTTAAC  1147
      |||||||| |||| ||||| ||||||  ||||||||  || |||||| ||
seq2  GATGAGAC-TATT-CAGGAATTTGCTTCAAGTCTTT--AC-TTACTT-AC  1126

seq1  TCACCTCCATTAAAT  1162
      | |||||| ||||||
seq2  T-ACCTCCCTTAAAT  1140