BAC Information

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BAC

Clone NameB6Ng01-150H19
Chromosome14 (Build37)
Map Location 119,267,645 - 119,401,212
singlet/doubletdoublet
Overlap geneCldn10, Dzip1, Dnajc3a, LOC100043828, Ugcgl2
Upstream geneGpc6, 5730405N03Rik, LOC100043822, Dct, Tgds, Gpr180, LOC100043824, LOC100043539, Sox21, LOC100043825, EG668814, LOC435422, Abcc4
Downstream geneHs6st3, LOC619601, EG621324, LOC100043830
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150H19.bB6Ng01-150H19.g
ACCDH946553DH946554
length1,149648
definitionDH946553|Mus musculus domesticus DNA, BAC clone: B6Ng01-150H19, 5' end.DH946554|Mus musculus domesticus DNA, BAC clone: B6Ng01-150H19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,400,067 - 119,401,212)(119,267,645 - 119,268,293)
sequence
gaattctcaagttgaccacaaaaactaaacaacacagcctgtgtagctaa
gcactgctatgaaggggagcgctaccgaagccactcggactactaaggag
tgttcctttttcagtgccttgtatgtggtggatcttaagaagttcaggag
aatctcagcaggtgacaggctccggggccagtaccaagctctcagccagg
atccaaacagtctctcaaaccttgatcaggcaagtcaacttttatgacaa
attttaatgactaaatatatattggtggataaaatgtttcagtccttcat
acagagttgtttctttaccacctcttttacaaacttattatctttataca
catacctctacttacccataacttcctatttgaagctcagagtatttctt
atcctagcactgttctcacttttcccttcccaaatctacttattcctcct
tctctgatgaacctgtcttatttccttctctaagacctgtctcatttcca
tctctgagacctgtctcattcctttctctgcagcctgtctcattcccttc
tctgtggcctgttccattttcttctctgtgacctgtcccagttccttctc
taagtcctgtctcatttagctgccttcctttccttcattccagtcatgac
atacagtccttcacatgcaataaggcccccgtccctctcgtctcttttgt
gtgcccattcatcttcaacaaaactcattccccaggatccctgaagacag
ctgtaaagcgggaatttctgggttcttcggagactcagttaagatgtaat
gttttgctggagcagaaaggtgaaagaatgttttacagaagcaaacacag
gtgatgtgtagaaagaatataaatatgaccttacagacagtgggagctca
agctttgctctgcctttctaatcttttctgatgacaggcatgtattgatt
cactttgtgttgttgagctttgctagtgtgacgtcataaacagaaactca
ccaaagacttgacgtgaggttcctgtagcttctgctgcttcccagacttg
ggcaattggcaagcctctcagttcttctgatgaactatcctgctggtcca
tgtggggtctgcccagtggaactggacctgcacctgctggttcaatgtg
gaattccgtatgcagatctcccaacatgggatttagagttttgtcttgct
ttggctcctgcctgggagcctccggcactgttttgtaaatgttacgggat
accagactgtgggagggactgttcgcagaggagattggcggtgggcatca
cgcagaaggctggtggattttggcaagcacccggtgggcaggctctcaat
ggcccactctatgtcagcaacttggaattcgcagtgttaggaacagatgt
gcttatgtccttatagaatatccatttatatagactcatccttgcagtta
cgcggccttagattaaagggaggtatctacatcagacagcaatgatgtcc
aaaaggccggcttaccaatggaactatggaattcagttttaaagaattca
tgtggataacatataaatgtacatcctagattttttttttttactttttt
cccaaaacatactgttttgcattaaggtaactggcgtgtgtgtgtgtgag
agtgtgtgtgtgtgtgtgtgtgtgattaccatttttaattaaagcaagga
cgttgtactctaaaaaggcctgtgcccttcattaaggtcccttcagtatt
ctttgggtcttttcatttgctgaaccttactttgggaggggctgctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_119400067_119401212
seq2: B6Ng01-150H19.b_51_1190 (reverse)

seq1  CACA-TGAACCAGCAGCTGCA-GTCCAG-TCCACTGGGCAGACACCACAT  47
      |||| ||||||||||| |||| |||||| |||||||||||||| ||||||
seq2  CACATTGAACCAGCAGGTGCAGGTCCAGTTCCACTGGGCAGACCCCACAT  50

seq1  GAACCAGCAGGGATAGGTCAATCCAGAAGAAACTGAGAGGCTTGCCAATT  97
      | ||||||| |||||| |||   |||||| ||||||||||||||||||||
seq2  GGACCAGCA-GGATAGTTCA--TCAGAAG-AACTGAGAGGCTTGCCAATT  96

seq1  GGCCCAAGTCTGGGGAAGCAGCAAGAAGCTACAGGAACCTCACGTCAAGT  147
       |||||||||| |||||||||| |||||||||||||||||||||||||| 
seq2  -GCCCAAGTCT-GGGAAGCAGC-AGAAGCTACAGGAACCTCACGTCAAG-  142

seq1  TCTTTGGTGAGTTTCTGTTTATGACGTCACCACTAGCAAAGCTCAACAAC  197
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TCTTTGGTGAGTTTCTGTTTATGACGTCA-CACTAGCAAAGCTCAACAAC  191

seq1  ACAAAGTGAATCAATACATGCCTGTCATCAGAAAAGATTAGAAAGGCAGA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTGAATCAATACATGCCTGTCATCAGAAAAGATTAGAAAGGCAGA  241

seq1  GCAAAGCTTGAGCTCCCACTGTCTGTAAGGTCATATTTATATTCTTTCTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGCTTGAGCTCCCACTGTCTGTAAGGTCATATTTATATTCTTTCTA  291

seq1  CACATCACCTGTGTTTGCTTCTGTAAAACATTCTTTCACCTTTCTGCTCC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCACCTGTGTTTGCTTCTGTAAAACATTCTTTCACCTTTCTGCTCC  341

seq1  AGCAAAACATTACATCTTAACTGAGTCTCCGAAGAACCCAGAAATTCCCG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAACATTACATCTTAACTGAGTCTCCGAAGAACCCAGAAATTCCCG  391

seq1  CTTTACAGCTGTCTTCAGGGATCCTGGGGAATGAGTTTTGTTGAAGATGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACAGCTGTCTTCAGGGATCCTGGGGAATGAGTTTTGTTGAAGATGA  441

seq1  ATGGGCACACAAAAGAGACGAGAGGGACGGGGGCCTTATTGCATGTGAAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCACACAAAAGAGACGAGAGGGACGGGGGCCTTATTGCATGTGAAG  491

seq1  GACTGTATGTCATGACTGGAATGAAGGAAAGGAAGGCAGCTAAATGAGAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTATGTCATGACTGGAATGAAGGAAAGGAAGGCAGCTAAATGAGAC  541

seq1  AGGACTTAGAGAAGGAACTGGGACAGGTCACAGAGAAGAAAATGGAACAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTTAGAGAAGGAACTGGGACAGGTCACAGAGAAGAAAATGGAACAG  591

seq1  GCCACAGAGAAGGGAATGAGACAGGCTGCAGAGAAAGGAATGAGACAGGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAGAGAAGGGAATGAGACAGGCTGCAGAGAAAGGAATGAGACAGGT  641

seq1  CTCAGAGATGGAAATGAGACAGGTCTTAGAGAAGGAAATAAGACAGGTTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGATGGAAATGAGACAGGTCTTAGAGAAGGAAATAAGACAGGTTC  691

seq1  ATCAGAGAAGGAGGAATAAGTAGATTTGGGAAGGGAAAAGTGAGAACAGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGAAGGAGGAATAAGTAGATTTGGGAAGGGAAAAGTGAGAACAGT  741

seq1  GCTAGGATAAGAAATACTCTGAGCTTCAAATAGGAAGTTATGGGTAAGTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGATAAGAAATACTCTGAGCTTCAAATAGGAAGTTATGGGTAAGTA  791

seq1  GAGGTATGTGTATAAAGATAATAAGTTTGTAAAAGAGGTGGTAAAGAAAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTATGTGTATAAAGATAATAAGTTTGTAAAAGAGGTGGTAAAGAAAC  841

seq1  AACTCTGTATGAAGGACTGAAACATTTTATCCACCAATATATATTTAGTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGTATGAAGGACTGAAACATTTTATCCACCAATATATATTTAGTC  891

seq1  ATTAAAATTTGTCATAAAAGTTGACTTGCCTGATCAAGGTTTGAGAGACT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAATTTGTCATAAAAGTTGACTTGCCTGATCAAGGTTTGAGAGACT  941

seq1  GTTTGGATCCTGGCTGAGAGCTTGGTACTGGCCCCGGAGCCTGTCACCTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGATCCTGGCTGAGAGCTTGGTACTGGCCCCGGAGCCTGTCACCTG  991

seq1  CTGAGATTCTCCTGAACTTCTTAAGATCCACCACATACAAGGCACTGAAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATTCTCCTGAACTTCTTAAGATCCACCACATACAAGGCACTGAAA  1041

seq1  AAGGAACACTCCTTAGTAGTCCGAGTGGCTTCGGTAGCGCTCCCCTTCAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACACTCCTTAGTAGTCCGAGTGGCTTCGGTAGCGCTCCCCTTCAT  1091

seq1  AGCAGTGCTTAGCTACACAGGCTGTGTTGTTTAGTTTTTGTGGTCAACT  1146
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGCTTAGCTACACAGGCTGTGTTGTTTAGTTTTTGTGGTCAACT  1140

seq1: chr14_119267645_119268293
seq2: B6Ng01-150H19.g_66_713

seq1  GAATTCCGTATGCAGATCTCCCAACATGGGATTTAGAGTTTTGTCTTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCGTATGCAGATCTCCCAACATGGGATTTAGAGTTTTGTCTTGCT  50

seq1  TTGGCTCCTGCCTGGGAGCCTCCGGCACTGTTTTGTAAATGTTACGGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTCCTGCCTGGGAGCCTCCGGCACTGTTTTGTAAATGTTACGGGAT  100

seq1  ACCAGACTGTGGGAGGGACTGTTCGCAGAGGAGATTGGCGGTGGGCATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGACTGTGGGAGGGACTGTTCGCAGAGGAGATTGGCGGTGGGCATCA  150

seq1  CGCAGAAGGCTGGTGGATTTTGGCAAGCACCCGGTGGGCAGGCTCTCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGAAGGCTGGTGGATTTTGGCAAGCACCCGGTGGGCAGGCTCTCAAT  200

seq1  GGCCCACTCTATGTCAGCAACTTGGAATTCGCAGTGTTAGGAACAGATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCACTCTATGTCAGCAACTTGGAATTCGCAGTGTTAGGAACAGATGT  250

seq1  GCTTATGTCCTTATAGAATATCCATTTATATAGACTCATCCTTGCAGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATGTCCTTATAGAATATCCATTTATATAGACTCATCCTTGCAGTTA  300

seq1  CGCGGCCTTAGATTAAAGGGAGGTATCTACATCAGACAGCAATGATGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGGCCTTAGATTAAAGGGAGGTATCTACATCAGACAGCAATGATGTCC  350

seq1  AAAAGGCCGGCTTACCAATGGAACTATGGAATTCAGTTTTAAAGAATTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCCGGCTTACCAATGGAACTATGGAATTCAGTTTTAAAGAATTCA  400

seq1  TGTGGATAACATATAAATGTACATCCTAGATTTTTTTTTTTTACTTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGATAACATATAAATGTACATCCTAGATTTTTTTTTTTTACTTTTTT  450

seq1  CCCAAAACATACTGTTTTGCATTAAGGTAACTGGCGTGTGTGTGTGTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAACATACTGTTTTGCATTAAGGTAACTGGCGTGTGTGTGTGTGAG  500

seq1  AGTGTGTGTGTGTGTGTGTGTGTGATTACCATTTTTAATTAAAGCAAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGTGTGTGTGTGTGTGTGTGATTACCATTTTTAATTAAAGCAAGGA  550

seq1  CGTTGTACTCTAAAAAGGCCTGTGCCCTTCATTAAGGTCCCTTCAGTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGTACTCTAAAAAGGCCTGTGCCCTTCATTAAGGTCCCTTCAGTATT  600

seq1  CTTTGGGTCTTTTCATTTGCTGTAGCCTTACTTTTGGAGGGGCTGCTCA  649
      |||||||||||||||||||||| | ||||||||| ||||||||||||||
seq2  CTTTGGGTCTTTTCATTTGCTG-AACCTTACTTTGGGAGGGGCTGCTCA  648