BAC Information

Click to search

BAC

Clone NameB6Ng01-151F15
Chromosome14 (Build37)
Map Location 94,376,238 - 94,564,728
singlet/doubletdoublet
Overlap geneLOC100043356
Upstream genePcdh9, LOC668566
Downstream geneLOC100043783, LOC677613
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151F15.bB6Ng01-151F15.g
ACCDH947191DH947192
length1,1831,095
definitionDH947191|Mus musculus domesticus DNA, BAC clone: B6Ng01-151F15, 5' end.DH947192|Mus musculus domesticus DNA, BAC clone: B6Ng01-151F15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,563,546 - 94,564,728)(94,376,238 - 94,377,335)
sequence
gaattcataaattaaaatggcattttacaagttgttaaaaattagttggg
cttgaaaattttatatacatatttatatgcatgccaagtttaagtttcct
ttttaaacacaagtatcccaagtcagacaatcacattaatctagttagtt
attgcactaaaacataaagctcttttctttaaaaggtggttaataaattt
ctctgaaactgagatttagctagtaacaatagtaatatttaatattctgt
tactttgtgtgggttatctcaaattatacacacatctgagcaacctgtag
gctaaagaatcttcctgacaaaacctatctaaagtttgaactgcacttct
catctactgagctggttgtctccgaaggcattcagctctatgcaatgcag
agtcggaaatcttcgtgtccctgtgtactgtgctgatctcaaaaaagaaa
actgtagttcccatgccccctagaaaatgtgaatgaacagatgcattgag
ttcaggcattgataagatgaggcttacacccaagtgctacatctttagac
actgtatatcactgtatgtcaaaccctcatctttccatctcttgtccttc
acatgcacaatgagcccctttatctcctatataatgtgtgctttactgtc
tccctttattccatcttcaaaaatttcttcttatgtttgtatcttgtgtc
tatattatccatcctgtgtttctattgtgctaattaaacttttagaagat
gatactggtcacgacttgttttcttctttagtactgaagaaagttaagtt
agcttgtcatttgagacaccaaagtgtaaagacagaataaagaaccagtg
ataaactaattatttgaacaatttaaggaagtccctctcctccttgctgg
aatggcttcactgcttctgtacttgatgctattgttacactaaataatcc
cttcataactatgcaagatgcttttctcttattactatcaggcaagcatg
attattgtataaaataatattaaacttaatgtaataaaatgccaatattt
tcttttttgcattttttgtcattaaatgaacatttagtggtgtactacaa
tactcatctgaataataattcttatctcataaggctcactatagggaatt
taatttccaaaggttttaaacgaagggagagaa
gaattcctgtgtgtgtgcaaacatgtgtgtctttgtatctatatgtattt
catgcatctcctttggctcttgttcttccttgtttggtcttattctgatc
tgtttgttctgactttcttttcttttattggtattattccttagatatct
ctgattcttagtgggagacagaaaggctgtgactccagatggaaggagaa
gtgagaaagtgggaggggcgagtgagggaaagaaaaatcatcatatgaac
atattgttggaaaagaatccattttcattataagcaaacaaatacatgtc
aaataaacataaattattgttaagcatcagcacatagttcactctacctc
cttgaaagttcattttaaaagaatgttagatttcatgtaattatgccaca
ttatcagctcaaataatataattaaagagagggtctccttaaaaattaca
tttggtaattcaaatcaatgtggctcatattcaatctgctaattttttga
acttatatactgttacacattcttttaggctttcagaaatgcaatttgag
ttttatttgaaataattgacaatgttagaaagttgtccatttaaacagtt
tgaaaataattttgaacttgtaaaagatatattttcttcttttgttacat
attattttttaaaataggagttggattatatgaaacttattggaataaat
gtcctttcttaaatattctttaatttgaaattagcgctgtgttaagtttt
cctttcttattattccacatccaccagttcagcatcatgtgcccttctat
ccagtggtagaaaactttttatcactatatttaatctgctgttaaagcca
gcagctaatgtaaaaaggacatatttacaatctttctataaatttttgat
catgtatgtgtctcaaaggatgtttttaaaggaggcatatttctgcttca
cctgggactggatgtgaaacagcgaagcactatgttgtcacttccctcac
aagtcttatgccaaaagattgagtttggggaatttgagtggtggcatcat
ttggcacatccaagaaatagcttggctttcttatgccaatatatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_94563546_94564728
seq2: B6Ng01-151F15.b_45_1227 (reverse)

seq1  TTCTCTCCTTTCGTTTAAAACCCTTTGGGAATTAAATT-CCTATAGTGAG  49
      |||||||| ||||||||||| ||||||| ||||||||| |||||||||||
seq2  TTCTCTCCCTTCGTTTAAAA-CCTTTGGAAATTAAATTCCCTATAGTGAG  49

seq1  GCTTATGAGATAAGAATTATTA-TCAGATGAGGTATGTAGTACA-CACTA  97
       ||||||||||||||||||||| |||||||||   ||||||||| |||||
seq2  CCTTATGAGATAAGAATTATTATTCAGATGAGTATTGTAGTACACCACTA  99

seq1  AGATGTTCATTTTTAATGACAAAAAATGC-AAAAAGAAAATATTGGCATT  146
      | |||||||  |||||||||||||||||| ||||||||||||||||||||
seq2  A-ATGTTCA--TTTAATGACAAAAAATGCAAAAAAGAAAATATTGGCATT  146

seq1  TTATTTACATTAAGTTTAATA-TATTTTATACAATAATCATGCTTGCCTG  195
      ||| ||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTA-TTACATTAAGTTTAATATTATTTTATACAATAATCATGCTTGCCTG  195

seq1  ATAGTAATAAGAGAAAAGCATCTTGCATAGTTATGAAGGGATTATTTAGT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAATAAGAGAAAAGCATCTTGCATAGTTATGAAGGGATTATTTAGT  245

seq1  GTAACAATAGCATCAAGTACAGAAGCAGTGAAGCCATTCCAGCAAGGAGG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAATAGCATCAAGTACAGAAGCAGTGAAGCCATTCCAGCAAGGAGG  295

seq1  AGAGGGACTTCCTTAAATTGTTCAAATAATTAGTTTATCACTGGTTCTTT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGACTTCCTTAAATTGTTCAAATAATTAGTTTATCACTGGTTCTTT  345

seq1  ATTCTGTCTTTACACTTTGGTGTCTCAAATGACAAGCTAACTTAACCTTC  395
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATTCTGTCTTTACACTTTGGTGTCTCAAATGACAAGCTAACTTAACTTTC  395

seq1  TTCAGTACTAAAGAAGAAAACAAGTCGTGACCAGTATCATCTTCTAAAAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTACTAAAGAAGAAAACAAGTCGTGACCAGTATCATCTTCTAAAAG  445

seq1  TTTAATTAGCACAATAGAAACACAGGATGGATAATATAGACACAAGATAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTAGCACAATAGAAACACAGGATGGATAATATAGACACAAGATAC  495

seq1  AAACATAAGAAGAAATTTTTGAAGATGGAATAAAGGGAGACAGTAAAGCA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAAGAAGAAATTTTTGAAGATGGAATAAAGGGAGACAGTAAAGCA  545

seq1  CACATTATATAGGAGATAAAGGGGCTCATTGTGCATGTGAAGGACAAGAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTATATAGGAGATAAAGGGGCTCATTGTGCATGTGAAGGACAAGAG  595

seq1  ATGGAAAGATGAGGGTTTGACATACAGTGATATACAGTGTCTAAAGATGT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAAGATGAGGGTTTGACATACAGTGATATACAGTGTCTAAAGATGT  645

seq1  AGCACTTGGGTGTAAGCCTCATCTTATCAATGCCTGAACTCAATGCATCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTTGGGTGTAAGCCTCATCTTATCAATGCCTGAACTCAATGCATCT  695

seq1  GTTCATTCACATTTTCTAGGGGGCATGGGAACTACAGTTTTCTTTTTTGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTCACATTTTCTAGGGGGCATGGGAACTACAGTTTTCTTTTTTGA  745

seq1  GATCAGCACAGTACACAGGGACACGAAGATTTCCGACTCTGCATTGCATA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGCACAGTACACAGGGACACGAAGATTTCCGACTCTGCATTGCATA  795

seq1  GAGCTGAATGCCTTCGGAGACAACCAGCTCAGTAGATGAGAAGTGCAGTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGAATGCCTTCGGAGACAACCAGCTCAGTAGATGAGAAGTGCAGTT  845

seq1  CAAACTTTAGATAGGTTTTGTCAGGAAGATTCTTTAGCCTACAGGTTGCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTTAGATAGGTTTTGTCAGGAAGATTCTTTAGCCTACAGGTTGCT  895

seq1  CAGATGTGTGTATAATTTGAGATAACCCACACAAAGTAACAGAATATTAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGTGTGTATAATTTGAGATAACCCACACAAAGTAACAGAATATTAA  945

seq1  ATATTACTATTGTTACTAGCTAAATCTCAGTTTCAGAGAAATTTATTAAC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACTATTGTTACTAGCTAAATCTCAGTTTCAGAGAAATTTATTAAC  995

seq1  CACCTTTTAAAGAAAAGAGCTTTATGTTTTAGTGCAATAACTAACTAGAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTTTAAAGAAAAGAGCTTTATGTTTTAGTGCAATAACTAACTAGAT  1045

seq1  TAATGTGATTGTCTGACTTGGGATACTTGTGTTTAAAAAGGAAACTTAAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTGATTGTCTGACTTGGGATACTTGTGTTTAAAAAGGAAACTTAAA  1095

seq1  CTTGGCATGCATATAAATATGTATATAAAATTTTCAAGCCCAACTAATTT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCATGCATATAAATATGTATATAAAATTTTCAAGCCCAACTAATTT  1145

seq1  TTAACAACTTGTAAAATGCCATTTTAATTTATGAATTC  1183
      ||||||||||||||||||||||||||||||||||||||
seq2  TTAACAACTTGTAAAATGCCATTTTAATTTATGAATTC  1183

seq1: chr14_94376238_94377335
seq2: B6Ng01-151F15.g_67_1161

seq1  GAATTCCTGTGTGTGTGCAAACATGTGTGTCTTTGTATCTATATGTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTGTGTGTGCAAACATGTGTGTCTTTGTATCTATATGTATTT  50

seq1  CATGCATCTCCTTTGGCTCTTGTTCTTCCTTGTTTGGTCTTATTCTGATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATCTCCTTTGGCTCTTGTTCTTCCTTGTTTGGTCTTATTCTGATC  100

seq1  TGTTTGTTCTGACTTTCTTTTCTTTTATTGGTATTATTCCTTAGATATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTCTGACTTTCTTTTCTTTTATTGGTATTATTCCTTAGATATCT  150

seq1  CTGATTCTTAGTGGGAGACAGAAAGGCTGTGACTCCAGATGGAAGGAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTCTTAGTGGGAGACAGAAAGGCTGTGACTCCAGATGGAAGGAGAA  200

seq1  GTGAGAAAGTGGGAGGGGCGAGTGAGGGAAAGAAAAATCATCATATGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAAAGTGGGAGGGGCGAGTGAGGGAAAGAAAAATCATCATATGAAC  250

seq1  ATATTGTTGGAAAAGAATCCATTTTCATTATAAGCAAACAAATACATGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTTGGAAAAGAATCCATTTTCATTATAAGCAAACAAATACATGTC  300

seq1  AAATAAACATAAATTATTGTTAAGCATCAGCACATAGTTCACTCTACCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAACATAAATTATTGTTAAGCATCAGCACATAGTTCACTCTACCTC  350

seq1  CTTGAAAGTTCATTTTAAAAGAATGTTAGATTTCATGTAATTATGCCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAAGTTCATTTTAAAAGAATGTTAGATTTCATGTAATTATGCCACA  400

seq1  TTATCAGCTCAAATAATATAATTAAAGAGAGGGTCTCCTTAAAAATTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAGCTCAAATAATATAATTAAAGAGAGGGTCTCCTTAAAAATTACA  450

seq1  TTTGGTAATTCAAATCAATGTGGCTCATATTCAATCTGCTAATTTTTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTAATTCAAATCAATGTGGCTCATATTCAATCTGCTAATTTTTTGA  500

seq1  ACTTATATACTGTTACACATTCTTTTAGGCTTTCAGAAATGCAATTTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATATACTGTTACACATTCTTTTAGGCTTTCAGAAATGCAATTTGAG  550

seq1  TTTTATTTGAAATAATTGACAATGTTAGAAAGTTGTCCATTTAAACAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTGAAATAATTGACAATGTTAGAAAGTTGTCCATTTAAACAGTT  600

seq1  TGAAAATAATTTTGAACTTGTAAAAGATATATTTTCTTCTTTTGTTACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATAATTTTGAACTTGTAAAAGATATATTTTCTTCTTTTGTTACAT  650

seq1  ATTATTTTTTAAAATAGGAGTTGGATTATATGAAACTTATTGGAATAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTTTAAAATAGGAGTTGGATTATATGAAACTTATTGGAATAAAT  700

seq1  GTCCTTTCTTAAATATTCTTTAATTTGAAATTAGCGCTGTGTTAAGTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTTCTTAAATATTCTTTAATTTGAAATTAGCGCTGTGTTAAGTTTT  750

seq1  CCTTTCTTATTATTCCACATCCACCAGTTCAGCATCATGTGCCCTTCTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTTATTATTCCACATCCACCAGTTCAGCATCATGTGCCCTTCTAT  800

seq1  CCAGTGGTAGAAAACTTTTTATCACTATATTTAATCTGCTGTTAAAGCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGGTAGAAAACTTTTTATCACTATATTTAATCTGCTGTTAAAGCCA  850

seq1  GCAGCTAATGTAAAAAGGACATATTTACAATCTTTCTATAAATTTTTGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTAATGTAAAAAGGACATATTTACAATCTTTCTATAAATTTTTGAT  900

seq1  CATGTATGTGTCTCAAAGGATGTTTTTAAAGGAGGCATATTTCTGCTTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATGTGTCTCAAAGGATGTTTTTAAAGGAGGCATATTTCTGCTTCA  950

seq1  CCTGGGACTGGATGTGGAAACAGCGAAGCACTATG-TGTCACTTCCCTCA  999
      ||||||||||||||| ||||||||||||||||||| ||||||||||||||
seq2  CCTGGGACTGGATGT-GAAACAGCGAAGCACTATGTTGTCACTTCCCTCA  999

seq1  CAAGTCTTATGCCAAAAAAGATGGAGTTTGGGGAATTTTGAGTTGTGGCA  1049
      |||||||||||||  ||||||| |||||||||||| ||||||| ||||||
seq2  CAAGTCTTATGCC--AAAAGATTGAGTTTGGGGAA-TTTGAGTGGTGGCA  1046

seq1  TCATTTGGCACATCAAAGAAATAAGCTTGGCTTTCTAATGGC-ATATATC  1098
      |||||||||||||| ||||||| ||||||||||||| ||| | |||||||
seq2  TCATTTGGCACATCCAAGAAAT-AGCTTGGCTTTCTTATGCCAATATATC  1095