BAC Information

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BAC

Clone NameB6Ng01-151G01
Chromosome14 (Build37)
Map Location 53,601,811 - 53,602,997
singlet/doubletsinglet
Overlap genenone
Upstream geneE130112L23Rik, Zfp219, G630016D24Rik, LOC100042276, Olfr221, LOC667348, LOC667352, Hnrpc, Rpgrip1, Supt16h, Chd8, Rab2b, Tox4, Mettl3, Sall2, Olfr1513, LOC193533, Olfr1512, Olfr1511, Olfr1510, OTTMUSG00000015242, Olfr1509, Olfr1508, Olfr1507, LOC671621, EG633692, LOC100042372, EG667441, LOC100042384, Trav5-1, EG667449, LOC671652, Trav6-2, LOC100042410, LOC546612, LOC627394, LOC100042419, Gm701, LOC382180, EG386506, LOC667476, LOC671927, LOC667481, LOC100042444, LOC640196, LOC627273, LOC100043177, LOC640931, EG627232, LOC100043186, LOC100042470, EG328482, LOC100042479, EG667525, LOC100043197, LOC100038850, LOC667542, EG667547, LOC100043214, EG667562, LOC100043202
Downstream geneLOC667574, Gm26, EG667583, Gm1489, C920008G01Rik, LOC667596, EG667604, LOC547329, LOC639655, LOC634322, EG636127, OTTMUSG00000015163, EG667626, LOC620297, LOC100042560, EG667635, LOC100043218, LOC100042568, LOC100043204, EG627424, LOC100043258, LOC100042574, LOC100042579, LOC100043269, LOC100043270, LOC100043274, EG667681, LOC100042593, EG193574, EG547424, LOC100042601, LOC100043282, A130082M07Rik, LOC100042607, LOC100042614, LOC100042621, LOC100043319, EG547328, LOC100043308, LOC328483, EG667765, EG630061, LOC630086, EG436467, LOC100043322, OTTMUSG00000015124, A430107P09Rik, OTTMUSG00000015049, LOC100043325, A730076H11Rik, LOC627777
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-151G01.bB6Ng01-151G01.g
ACCDH947209DH947210
length1,1991,033
definitionDH947209|Mus musculus domesticus DNA, BAC clone: B6Ng01-151G01, 5' end.DH947210|Mus musculus domesticus DNA, BAC clone: B6Ng01-151G01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtcatcatagagagtagacagtcctgctgtataatagcactga
caagaaagctgtgctgctctgggcaatatggtggcttggattttacacac
gctgggctcttaaattgccacagtaaattgaaagccagtatgagttgctg
gtctttgtttttgctgtgcttctttctttgtgaccaaccttcaacatgac
tctaactccttccgtcttatggaagtacttgtaagtctgaattcatagat
gattgtcattcttctaacacttgtggatttggctctatttttttaatata
tatatatactgttgttctttaagttatggggaaatttgaaagaaacacac
acacgcacacgcacacacacacacacacaggcacacacaccctctacagt
ctcattcataggctaaacattcacaaattgctagcattaccccaggaaag
acaattcttttgggaaggaacagatgagagaagaccccatcttccttctt
cttccttagagcaaagaaaaacacactgtgacttaatcaatgcattccaa
tggcccagaaagctaaagtgtctaatcaagagtttctttactggagggca
gtattgtcaccagccatggaagtctctatgttgtttctttagtaagaaga
ccttctcatctggagtcccaacttgtcaaagatagcagaagcaatctaat
tttgtgcatttcctgttgcctctgcaacatgctgcagagcatctaccaag
ggcaatatctgtgtcatatagtgtcactaccatggctgtggtggtcattc
acactcagcctgagacaattgcatctgaagtctggggtacactgcataac
ctggtttcctagggagtattaacaagccattcactttcactaaatgctaa
aaccaatatataccaaattaggaaagatacaatgtgctttgtgggagttt
tacttttgtaaaacaggagcatagcagaaggcaggctgttggaccctcag
gacatttgtttcctcctatggcctccagagggcgctgctgcactcacttg
ttgttcttctttcctttgaagattcttcacctgctcacatctcattcctt
cttgcagcttgcctgaagttatatagcaaaggcaagttgacaagatttca
gatatttcaaaaccttccaggcttgtgtttgcaagcgttcagtttttat
gaattcctgttctcccaccccctttatttccccaggagcgctgccccacg
ttttctcaaggtcatgacatggattctgtatataaaactacagcagaact
tggcagttgtgtgtttcccacatggaactgattttgaaaatgtgaaggga
cgtaaaaatactatttgggctcaatgcttggtaggatcagaatctgcctg
aagagaggctattggtaaaggtgctatctcaattgtactggaaaccatga
catcgaagatcccaggaccatgaaatgaccaagaacactggcaggtatag
attgtagccagactgaacccatggtagaactgcccaagccctgtggagcc
caaaaaaactccaagtgagttccagaccctgaaaccctgagctctttgca
ctgttgggttttgtttttgcatttatctaattgcaactgtgtctgattct
tccctgttagaataagaaggacaattgagaaacttcaggcttttaaaaag
acttttgatattttatcgtcttctgtgaaccttaacttttaacatctgag
cttcagctcaggttagatttttttttttaacagactgaacttttaaaatg
tttaaattttttaaagattgtgggactttaaaaagtttaaattcttatat
tagcatcagatattgggaggataataaagtttaccatgtaatagtgatgc
atttgtgtgtcaagttgtcgaggggtaaactttactgggtagtttctgtc
aatttaaaacaagctagctccgggcggtggtggcgcacacctttaatcct
agcactttgggaggcagaggcaggcagaatttttgagttcgaggccagtc
tggtctacaaagtgagtgccaggacagccagggctacacagagaaactct
gtcttcgaaaaaaaaaaaaacccaaccaaaacaaaccaaaccataaaaac
taaactatcatctactacaaatactcgctagctcatctggacaagagaat
gtcactgaggattttcctcctcacatagcctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_53601811_53602997
seq2: B6Ng01-151G01.b_46_1244

seq1  GAATTCTGTCATCATAGAGAGTAGACAGTCCTGCTGTATAATAGCACTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCATCATAGAGAGTAGACAGTCCTGCTGTATAATAGCACTGA  50

seq1  CAAGAAAGCTGTGCTGCTCTGGGCAATATGGTGGCTTGGATTTTACACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAAGCTGTGCTGCTCTGGGCAATATGGTGGCTTGGATTTTACACAC  100

seq1  GCTGGGCTCTTAAATTGCCACAGTAAATTGAAAGCCAGTATGAGTTGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGCTCTTAAATTGCCACAGTAAATTGAAAGCCAGTATGAGTTGCTG  150

seq1  GTCTTTGTTTTTGCTGTGCTTCTTTCTTTGTGACCAACCTTCAACATGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTGTTTTTGCTGTGCTTCTTTCTTTGTGACCAACCTTCAACATGAC  200

seq1  TCTAACTCCTTCCGTCTTATGGAAGTACTTGTAAGTCTGAATTCATAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACTCCTTCCGTCTTATGGAAGTACTTGTAAGTCTGAATTCATAGAT  250

seq1  GATTGTCATTCTTCTAACACTTGTGGATTTGGCTCTATTTTTTTAATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTCATTCTTCTAACACTTGTGGATTTGGCTCTATTTTTTTAATATA  300

seq1  TATATATACTGTTGTTCTTTAAGTTATGGGGAAATTTGAAAGAAACACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATACTGTTGTTCTTTAAGTTATGGGGAAATTTGAAAGAAACACAC  350

seq1  ACACGCACACGCACACACACACACACACAGGCACACACACCCTCTACAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGCACACGCACACACACACACACACAGGCACACACACCCTCTACAGT  400

seq1  CTCATTCATAGGCTAAACATTCACAAATTGCTAGCATTACCCCAGGAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTCATAGGCTAAACATTCACAAATTGCTAGCATTACCCCAGGAAAG  450

seq1  ACAATTCTTTTGGGAAGGAACAGATGAGAGAAGACCCCATCTTCCTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCTTTTGGGAAGGAACAGATGAGAGAAGACCCCATCTTCCTTCTT  500

seq1  CTTCCTTAGAGCAAAGAAAAACACACTGTGACTTAATCAATGCATTCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTAGAGCAAAGAAAAACACACTGTGACTTAATCAATGCATTCCAA  550

seq1  TGGCCCAGAAAGCTAAAGTGTCTAATCAAGAGTTTCTTTACTGGAGGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCAGAAAGCTAAAGTGTCTAATCAAGAGTTTCTTTACTGGAGGGCA  600

seq1  GTATTGTCACCAGCCATGGAAGTCTCTATGTTGTTTCTTTAGTAAGAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGTCACCAGCCATGGAAGTCTCTATGTTGTTTCTTTAGTAAGAAGA  650

seq1  CCTTCTCATCTGGAGTCCCAACTTGTCAAAGATAGCAGAAGCAATCTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCATCTGGAGTCCCAACTTGTCAAAGATAGCAGAAGCAATCTAAT  700

seq1  TTTGTGCATTTCCTGTTGCCTCTGCAACATGCTGCAGAGCATCTACCAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCATTTCCTGTTGCCTCTGCAACATGCTGCAGAGCATCTACCAAG  750

seq1  GGCAATATCTGTGTCATATAGTGTCACTACCATGGCTGTGGTGGTCATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATATCTGTGTCATATAGTGTCACTACCATGGCTGTGGTGGTCATTC  800

seq1  ACACTCAGCCTGAGACAATTGCATCTGAAGTCTGGGGTACACTGCATAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCAGCCTGAGACAATTGCATCTGAAGTCTGGGGTACACTGCATAAC  850

seq1  CTGGTTTCCTAGGGAGTATTAACAAGCCATTCACTTTCACTAAATGCTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTCCTAGGGAGTATTAACAAGCCATTCACTTTCACTAAATGCTAA  900

seq1  AACCAATATATACCAAATTAGGAAAAGATACAATGTGCTTTGTGGGAGTT  950
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AACCAATATATACCAAATTAGG-AAAGATACAATGTGCTTTGTGGGAGTT  949

seq1  TTAC-TTTGTAAAACAGGAGCATAGCAGGAGGCAGGCTG-TGGACCCTCA  998
      |||| ||||||||||||||||||||||| |||||||||| ||||||||||
seq2  TTACTTTTGTAAAACAGGAGCATAGCAGAAGGCAGGCTGTTGGACCCTCA  999

seq1  AGACATTTGTTTCCTCCTATGGCCTCCAGAGGGCGCTGCTGCACTCACTA  1048
       |||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGACATTTGTTTCCTCCTATGGCCTCCAGAGGGCGCTGCTGCACTCACTT  1049

seq1  G-TGTTCCTTCTTCCTTTGAAGA-TCTTCACCTGCTCACATCTCA-TCCT  1095
      | ||||| |  |||||||||||| ||||||||||||||||||||| ||||
seq2  GTTGTTCTTCTTTCCTTTGAAGATTCTTCACCTGCTCACATCTCATTCCT  1099

seq1  TCTTGCAGC-TGGCTGA--GTATATAGCAAAGGCAAG-TGACAAGA-ATC  1140
      ||||||||| || ||||   ||||||||||||||||| ||||||||  ||
seq2  TCTTGCAGCTTGCCTGAAGTTATATAGCAAAGGCAAGTTGACAAGATTTC  1149

seq1  AGATA-TTCAAAACCTTCCAGGCTCGTGTTTGC-AGCG-TCAGTTTTTAT  1187
      ||||| |||||||||||||||||| |||||||| |||| |||||||||||
seq2  AGATATTTCAAAACCTTCCAGGCTTGTGTTTGCAAGCGTTCAGTTTTTAT  1199