BAC Information

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BAC

Clone NameB6Ng01-152B11
Chromosome14 (Build37)
Map Location 64,186,959 - 64,187,212
singlet/doubletsinglet
Overlap genenone
Upstream geneEG629059, E130113E03Rik, Ints6, LOC100042969, LOC668263, Wdfy2, LOC668268, EG432867, EG654465, EG654458, 2410125J01Rik, Defb42, LOC100042978, Ctsb, Fdft1, Neil2, Gata4, LOC100042988, LOC432868, Blk, LOC668293, BC065085, Tdh, Mtmr9
Downstream geneXkr6, LOC668306, 2610028A01Rik, Sox7, 4930578I06Rik, Rp1l1, 4933401F05Rik, 1700007N14Rik, 1700049K14Rik, Msra
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152B11.bB6Ng01-152B11.g
ACCDH947751DH947752
length1,173986
definitionDH947751|Mus musculus domesticus DNA, BAC clone: B6Ng01-152B11, 5' end.DH947752|Mus musculus domesticus DNA, BAC clone: B6Ng01-152B11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccacaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttatattagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgagtttatgaaattcctagccaa
atggatggacctgagggcatcatcctgagtgaggtaacacattcacaaag
aaactcacacaatatgtactcactgataagtggatattagctccaaacct
aggatacccaagatataagatataatttgctaaacacatgaaactcaaga
agaatgaagactgaagtgtggacactatgcccctccttagaattgggaac
aaaacacccatggaaggagttacagagacaaagtttggagctgagatgaa
aggatggaccatgtagagactgccatatccagggatccaccccataatca
gcatccaaacgctgacaccattgcatacactagcaagattttattgaaag
gacccagatgtagctgtctcttgtgagactatgccggggcctagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcatagggctcccaa
tggaggagctagagaagtagccaagagctaaagggatttgcaaccctata
ggtggaacaacattattgactaacctgtacccgagctcttgactcctagc
tgcatatatatccaagatggcctagtcggccatcactgggaagagagcca
ttggacttgcaactttatatttctcagtacagggaaacccaggcgaaagg
ggatggtggcaggggatgtgggt
gaattccagggcagccaggctacacagagaaaccctgtctctgaaaaata
aaaaacaaaaaacaaaacaaacaaacaacaacaacaacaacaacaaaaca
agaatagaggaacacgaagatacccagctcaaagaacatggaaacatcta
caacgaaatcatagaagaaaacttcaccaacccaaagaaagagatggcca
tatgtacatgaagcctatagaacaccaaatagattggaccaggaaagaaa
atcctttcatcatataataatcaaaacactaaatgcacagaacaaagaaa
gaatattaaaagcagcaaggggaaaagaccaagtagcatataaaggcaga
gctatcagagttacaccagacttcttaacaaaaacactaaaagagcctgg
acagaggtcatgaagaccctaaaagaacacaaatgccagcccaggctact
atgaccagaaaatttctcaatcaacatacatggagaaaccaaaatattcc
aggataaaaccaaattcaaacaatatatatctaccaatctagccctacag
aagactccagaaggaaacaaccaagcaacacaaggagagtacctgcacca
aagaaggaaaaaaaacattaatcatcttacaacaaagccaaaagaagaga
atcacatgcacagaatgccacctacaacaacaaacatatcaggaaataac
aatcatctgtctttactagctctcaatatcaatggattcagttcccctat
aaaaagacataatctaataaacaaacaggatccagcattttgctgtgtac
aagaaacacacctcaataacaaagacagacactatcctcagtgtaaaagg
ctggaaaaagtcttccaaggaaataaaccagctggagttgccaacctaat
atccaattaaatggacattcaccaaatgttatcaggagatgaggaatgac
atttcaaattcaggaaaggaaaatccaccaagagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_64186959_64187212
seq2: B6Ng01-152B11.g_88_168

seq1  GGCTACACAGAGAAACCCTGTCTC-GAAAAACAAAAAACAAAAAACAAAA  49
      |||||||||||||||||||||||| |||||| ||||||||||||||||||
seq2  GGCTACACAGAGAAACCCTGTCTCTGAAAAATAAAAAACAAAAAACAAAA  50

seq1  CAA---------AACAAAAAACATATCTTAGGGCCCAAGGTATATGCGCC  90
      |||         ||||| ||  | | |  |                    
seq2  CAAACAAACAACAACAACAACAACAACAAAA-------------------  81

seq1  TGCCTTTAGCTCCCTAAAACTCCAGAGACAGAGCCAGGTAGATCTCTGTG  140
                                                        
seq2  --------------------------------------------------  81

seq1  AATCCAAGGCTAACCTGGTCTACATAGTGAGTTCCAGGCCAGCCAAGACT  190
                                                        
seq2  --------------------------------------------------  81

seq1  ATATAGTAGGGCCCTGTATAAAAACAAATAAATAAAATAAAACAAATAAA  240
                                                        
seq2  --------------------------------------------------  81

seq1  CAACAACAACAAAA  254
                    
seq2  --------------  81