BAC Information

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BAC

Clone NameB6Ng01-152F02
Chromosome14 (Build37)
Map Location 21,280,746 - 21,281,883
singlet/doubletsinglet
Overlap geneAnxa7
Upstream gene1700110I01Rik, EG664814, LOC100039452, LOC100038983, LOC100039441, EG432825, LOC673583, EG664855, Nid2, 2700060E02Rik, LOC100039534, Gng2, 1810063B07Rik, Kcnk5, LOC100039106, Kcnk16, Nudt13, Ecd, AA536717, Dnajc9, Mrps16, Ttc18
Downstream geneZmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1, Adk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152F02.bB6Ng01-152F02.g
ACCDH947921DH947922
length1,1311,007
definitionDH947921|Mus musculus domesticus DNA, BAC clone: B6Ng01-152F02, 5' end.DH947922|Mus musculus domesticus DNA, BAC clone: B6Ng01-152F02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtctttccgacagtttccttttctcatttttgtagctccagcc
tttgcacacgatcccatacccacaacacatcttgtatgctttctgtagct
ctctctccatggctcctctgagtccctcctccacatcttggtcccttgag
atcctgtcatgttgtgcacaggcaggcagccagtaactcctgatactcaa
ccagtgggctagtcttttgtgtgtctgtcaaatacatcagcctcatcttc
ctctttttatactattccaaataccctcttggagtatttcctgtcctctc
tctgtatacctggggaataataaggtagatgccaactgtagagagaatgt
cttgtgtactgtgtggaagcatcacctgtcaataaaaagctgatggccta
ctagcaaaaggcagggctaataaggtggggagggcactggtagaaagata
ggaactctgaggagacagtcagtcgagggaaaggatttgctacgtggact
ccgaggagacagacatgaaactgagaagtaaccagccacgtggcagacat
agagtagtttaatgggttacataagttatgagctagttagggaacaagaa
cgagtttatggcctacacatttactcagaattaagcctttgttattcgga
aactggggcgcatttgggaaagctcacacttacatcaactgcagtactct
tctgtactcctgcctctcctcctatggctccgccactctctggcacttgc
actgtggaacacactgacatgacactgctaagctgtcacagacttcgcct
tcatctttgccacagagcctcatgaaggttctgatttcatgaaatctaaa
agaagttatttttctattccttacaaaagtcagatatacagaactcagtc
tcagtaataactagaagaaatctgtccactgcattctgtgttgttccaca
agacaccaatagtccaaggagctaactactataaagtatgtttcttcact
aacaaacagtcattaatactatactcacctggcacatggacacgaggaga
cgttcaaaatgtccgaggtatctgactaatgtcttctcaaggtctcgtca
aaatctaaatggtacatctaaccaatgtctc
gaattccagcactcatgaaatggaagcaggagtattagaagttcagggtc
atcccaggctacatagtgaattcagagttagcctaggatacaggagaccc
tgttcaaaaagaaaattatgagctatgtgctaccatttttataatattct
ttagtattgttgaaatgacaatgataaatatggaggagtagactagtggt
tgctgggagttagaagtatagataggtgaggcgataaagaggtagggtgg
aggagctctgtggtgatgaaactcttctgtatctttttttttttttaaaa
agatttactttaaatttatatatatgaagtgttttgcctgcatgctgtct
ctgcaccacatgcatgtttgatgcccacagaaatcagaagagaacatcag
agtccctggacctggagttacaggcagttgtgagctactatgtgggtgct
gggaatcaaacccaggtaggtcctctggaagagcatcatgtgcttttaac
cactgagctatctctccagcaccactctttggtgtcttgatggtggaagt
ggttacatgactgtatatgatgaaattgcattgagatacatatgaacaca
agatcatataaaactgctaaaatcggaatgctctatgtgttatattaatt
ccatttatctgtctatcatatatttagtctttaaaaaagattaaatatat
ttagagatatttctgctttccaggaaaggttgctgtgtcttggtgagttg
cttcccactttgctggtttgggatttaagtgtagtgcttttgtgttttcc
tgtcaggaaaacctcctgatgagaattcacttccatattgctgaggaaac
aaagaggaaatgtgtactgctcacactgcctatcccaccagaaattttca
tgacattggtttgagcaagtaaactttaccttgggactttcttaagatat
ttatctgagagtaagtttcaaactgttctgactggctgcttaggggcctt
tccctcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_21280746_21281883
seq2: B6Ng01-152F02.b_48_1178

seq1  GAATTCAGTCTTTCCGACAGTTTCCTTTTCTCATTTTTGTAGCTCCAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCTTTCCGACAGTTTCCTTTTCTCATTTTTGTAGCTCCAGCC  50

seq1  TTTGCACACGATCCCATACCCACAACACATCTTGTATGCTTTCTGTAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCACACGATCCCATACCCACAACACATCTTGTATGCTTTCTGTAGCT  100

seq1  CTCTCTCCATGGCTCCTCTGAGTCCCTCCTCCACATCTTGGTCCCTTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCCATGGCTCCTCTGAGTCCCTCCTCCACATCTTGGTCCCTTGAG  150

seq1  ATCCTGTCATGTTGTGCACAGGCAGGCAGCCAGTAACTCCTGATACTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTCATGTTGTGCACAGGCAGGCAGCCAGTAACTCCTGATACTCAA  200

seq1  CCAGTGGGCTAGTCTTTTGTGTGTCTGTCAAATACATCAGCCTCATCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGGGCTAGTCTTTTGTGTGTCTGTCAAATACATCAGCCTCATCTTC  250

seq1  CTCTTTTTATACTATTCCAAATACCCTCTTGGAGTATTTCCTGTCCTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTTATACTATTCCAAATACCCTCTTGGAGTATTTCCTGTCCTCTC  300

seq1  TCTGTATACCTGGGGAATAATAAGGTAGATGCCAACTGTAGAGAGAATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATACCTGGGGAATAATAAGGTAGATGCCAACTGTAGAGAGAATGT  350

seq1  CTTGTGTACTGTGTGGAAGCATCACCTGTCAATAAAAAGCTGATGGCCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGTACTGTGTGGAAGCATCACCTGTCAATAAAAAGCTGATGGCCTA  400

seq1  CTAGCAAAAGGCAGGGCTAATAAGGTGGGGAGGGCACTGGTAGAAAGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAAAAGGCAGGGCTAATAAGGTGGGGAGGGCACTGGTAGAAAGATA  450

seq1  GGAACTCTGAGGAGACAGTCAGTCGAGGGAAAGGATTTGCTACGTGGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTCTGAGGAGACAGTCAGTCGAGGGAAAGGATTTGCTACGTGGACT  500

seq1  CCGAGGAGACAGACATGAAACTGAGAAGTAACCAGCCACGTGGCAGACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGGAGACAGACATGAAACTGAGAAGTAACCAGCCACGTGGCAGACAT  550

seq1  AGAGTAGTTTAATGGGTTACATAAGTTATGAGCTAGTTAGGGAACAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAGTTTAATGGGTTACATAAGTTATGAGCTAGTTAGGGAACAAGAA  600

seq1  CGAGTTTATGGCCTACACATTTACTCAGAATTAAGCCTTTGTTATTCGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTTTATGGCCTACACATTTACTCAGAATTAAGCCTTTGTTATTCGGA  650

seq1  AACTGGGGCGCATTTGGGAAAGCTCACACTTACATCAACTGCAGTACTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGGGCGCATTTGGGAAAGCTCACACTTACATCAACTGCAGTACTCT  700

seq1  TCTGTACTCCTGCCTCTCCTCCTATGGCTCCGCCACCCTCTGGCACTTGC  750
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCTGTACTCCTGCCTCTCCTCCTATGGCTCCGCCACTCTCTGGCACTTGC  750

seq1  ACTGTGGAACACACTGACATGACACTGCTAAGCTGTCACAGACTTCGCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGAACACACTGACATGACACTGCTAAGCTGTCACAGACTTCGCCT  800

seq1  TCATCTTTGCCACAGAGCCTCAGGAAGGTTCTGATTTCATGAAATCTAAA  850
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCATCTTTGCCACAGAGCCTCATGAAGGTTCTGATTTCATGAAATCTAAA  850

seq1  AGAAGTTATTTTTCTATTCCTTACAAAAGTCAGATATACAGAACTCAGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTATTTTTCTATTCCTTACAAAAGTCAGATATACAGAACTCAGTC  900

seq1  TCAGTAATAACTAGAAGAAATCTGTCCACTGCATTCTGTGTTGTTCCACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TCAGTAATAACTAGAAGAAATCTGTCCACTGCATTCTGTGTTGTTCCAC-  949

seq1  AAGACACCAATAGTCCAAGGAGCTAACTACTAATAAAGTATGTTTCCTTC  1000
      ||||||||||||||||||||||||||||||| ||||||||||||| ||||
seq2  AAGACACCAATAGTCCAAGGAGCTAACTACT-ATAAAGTATGTTT-CTTC  997

seq1  ACTAACAAACAGTCATTAATACTATACTCACCTGGCACATGGACACGAGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACAAACAGTCATTAATACTATACTCACCTGGCACATGGACACGAGG  1047

seq1  AGACGTTCAAAATGTCCCGAGGTATCTGACCTAATGTCCTTCTCAAGGTC  1100
      ||||||||||||||| ||||||||||||| ||||||| ||||||||||||
seq2  AGACGTTCAAAATGT-CCGAGGTATCTGA-CTAATGT-CTTCTCAAGGTC  1094

seq1  TCGTCCAAATTCTAATTGGTAACATCTAA-CAATGTCTC  1138
      |||| |||| ||||| |||| |||||||| |||||||||
seq2  TCGT-CAAAATCTAAATGGT-ACATCTAACCAATGTCTC  1131