BAC Information

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BAC

Clone NameB6Ng01-152J14
Chromosome14 (Build37)
Map Location 14,941,886 - 14,942,984
singlet/doubletsinglet
Overlap genenone
Upstream geneEG328354, Synpr, A430083B19Rik, EG382844, LOC100042045, Gm281, Thoc7, Atxn7
Downstream genePsmd6, Olfr720, LOC667125, LOC100042543, Olfr31, Il3ra, LOC627139, Olfr721-ps1, LOC667152, LOC100042147, Slc4a7, Nek10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152J14.bB6Ng01-152J14.g
ACCDH948134DH948135
length1,2581,091
definitionDH948134|Mus musculus domesticus DNA, BAC clone: B6Ng01-152J14, 5' end.DH948135|Mus musculus domesticus DNA, BAC clone: B6Ng01-152J14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatccactgatttttaagctttccccatgttattttatttcagga
ttctcaaattgaatcctgttcagtgttttctggagctcatctgcagactt
ggaaatgaaaatccacccaatcttatataaaagcactaagattaggggtc
ctaaagctacttaagcagttactcgacatcctgtaggaagacaaagcaca
taagttagtacatataataagggacaatttactctaaaagagagagcagt
gttgtagccaagagcaaactgccgacaaggctcagttatcagtggggctc
caaagcctgaaaatgggacaatgtatgtttcagtgccatcactgacagac
aagttcagaattcatcctcacccttagggattaagctatttccagataaa
aaataaattattttcttcaagtacactccccatcacacaaggaaacctga
cttgatttatacaaggacacataggttaggaagagtatccaagaacttct
caaatctcagaatcaccagataatttagaagttcgatttatttttttttt
gagtattttttagattagatattttcttcacttacatttcaaatgttatc
ccacttcctggtttctcctcctcctccaggagcataaagtcctcacacct
ggcttctaagaatataggtgaccttagatagtactgactttgtctcagtt
gttacattgcctagttcctgctagtctttatgtatgcattcttctgtttg
tgtaaagagtcattaagcatctggtaacctcaatgtacctttgctgatgt
gttaccctacttcctttattttctttctgcattataatctgatgcttgct
ttgagaaattacatttcagatacagcactttctctggtgttagtgtctgt
caccccaccaactcctttgtccaacctgaatacaaagattctgggttctc
caagggttgagggactgactgagtccagttcatggcacatcccatataca
gtaaccaaacccagaatactattatggatgctaataagtacttgctgaca
ggaacttgatatagaaatctctaaatgttctctgccagtgccgacaaaat
acagaggtgaatgctattcaggctatcattttaatgagcacagagtccca
agtatggagcttaagaaaggattgaatggaccttgatggtgcagtcaaga
gaaacatatggactactgtatcctaatgttcctagctcctcaactactta
tactacac
gaattcctgtagtggcatcagtatttaaaatgtaaaaatcaaaagaaaga
ctatcaaagccaggaaggattagtctgtatagtcaaacttaggtttgttg
cagtgtgtaaactgttagttgttaaaactcttggtcagtttcatggcatt
ggtttagacgacttccgcttctgttgacattcttcacagaagcatgtttc
aaagtggatctggactttagacgtctgtagagtaaaatgaacctcaatat
tttccagagattataaaatagaatcaaagatgaatttctctaggagtaag
atggcccagtcatagggagctgggcctagaactggccatgtctgcttaat
gtggggtggaactgtttttttcatgtcttgtagccatatttcagaggtgt
caggggttagagggctcagctaagtttagttcccagaactcataaccccc
tgtaattccaattctagtacttaccacaggcctcctgggggcaccccata
tatatgtggcacactcacgtgcccatttgtgcacacacacacacacaaat
gtttaaaaaaaaaaaagagttggattttggttttcagctctaagctgaaa
cttgaagagtttattcagaatttctaagtaatcttaaactatttaacagg
gcctccagttttgtatccatgcaaatggtgaacacaaaaccatcaccatg
ttatttgcagagacctgtccttacactgctctaggcagtgggcacttttt
aaaaagtagtgctacctagaggtgcctggctttctttctcaaagagcctt
tattacttttcatgaaaagaagaaaagtattgataacccttttttgaaaa
tagttaaaactgagcacatttaagcgaggaggagtgtgggcagagcattc
tctgaccttaaaagccatagtgtctttctggcaggccaagtcatttcagt
gtgagttggaaaaaacaattcttttttgaggtatacagagattctactaa
atttaaaagggcatgaagtttttttttttcttttatggaatatagtcttt
tctcccatctttttaagatgttaatttttttaagtgctcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_14941886_14942984
seq2: B6Ng01-152J14.g_70_1160

seq1  GAATTCCTGTAGTGGCATCAGTATTTAAAATGTAAAAATCAAAAGAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTAGTGGCATCAGTATTTAAAATGTAAAAATCAAAAGAAAGA  50

seq1  CTATCAAAGCCAGGAAGGATTAGTCTGTATAGTCAAACTTAGGTTTGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAAAGCCAGGAAGGATTAGTCTGTATAGTCAAACTTAGGTTTGTTG  100

seq1  CAGTGTGTAAACTGTTAGTTGTTAAAACTCTTGGTCAGTTTCATGGCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGTAAACTGTTAGTTGTTAAAACTCTTGGTCAGTTTCATGGCATT  150

seq1  GGTTTAGACGACTTCCGCTTCTGTTGACATTCTTCACAGAAGCATGTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAGACGACTTCCGCTTCTGTTGACATTCTTCACAGAAGCATGTTTC  200

seq1  AAAGTGGATCTGGACTTTAGACGTCTGTAGAGTAAAATGAACCTCAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGATCTGGACTTTAGACGTCTGTAGAGTAAAATGAACCTCAATAT  250

seq1  TTTCCAGAGATTATAAAATAGAATCAAAGATGAATTTCTCTAGGAGTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGAGATTATAAAATAGAATCAAAGATGAATTTCTCTAGGAGTAAG  300

seq1  ATGGCCCAGTCATAGGGAGCTGGGCCTAGAACTGGCCATGTCTGCTTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCCAGTCATAGGGAGCTGGGCCTAGAACTGGCCATGTCTGCTTAAT  350

seq1  GTGGGGTGGAACTGTTTTTTTCATGTCTTGTAGCCATATTTCAGAGGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGTGGAACTGTTTTTTTCATGTCTTGTAGCCATATTTCAGAGGTGT  400

seq1  CAGGGGTTAGAGGGCTCAGCTAAGTTTAGTTCCCAGAACTCATAACCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGTTAGAGGGCTCAGCTAAGTTTAGTTCCCAGAACTCATAACCCCC  450

seq1  TGTAATTCCAATTCTAGTACTTACCACAGGCCTCCTGGGGGCACCCCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTCCAATTCTAGTACTTACCACAGGCCTCCTGGGGGCACCCCATA  500

seq1  TATATGTGGCACACTCACGTGCCCATTTGTGCACACACACACACACAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTGGCACACTCACGTGCCCATTTGTGCACACACACACACACAAAT  550

seq1  GTTTAAAAAAAAAAAAGAGTTGGATTTTGGTTTTCAGCTCTAAGCTGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAAAAAAAAAAAGAGTTGGATTTTGGTTTTCAGCTCTAAGCTGAAA  600

seq1  CTTGAAGAGTTTATTCAGAATTTCTAAGTAATCTTAAACTATTTAACAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGAGTTTATTCAGAATTTCTAAGTAATCTTAAACTATTTAACAGG  650

seq1  GCCTCCAGTTTTGTATCCATGCAAATGGTGAACACAAAACCATCACCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCAGTTTTGTATCCATGCAAATGGTGAACACAAAACCATCACCATG  700

seq1  TTATTTGCAGAGACCTGTCCTTACACTGCTCTAGGCAGTGGGCACTTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGCAGAGACCTGTCCTTACACTGCTCTAGGCAGTGGGCACTTTTT  750

seq1  AAAAAAGTAGTGCTACCTAGAGGTGCCTGGCTTTCTTTCTCAAAGAGCCT  800
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -AAAAAGTAGTGCTACCTAGAGGTGCCTGGCTTTCTTTCTCAAAGAGCCT  799

seq1  TTATTACTTTTCATGAAAAGAAGAAAAGTATTGATAACCC-TTTTTGAAA  849
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTATTACTTTTCATGAAAAGAAGAAAAGTATTGATAACCCTTTTTTGAAA  849

seq1  ATAGTTAAAACTGAGCACATTTAAGCGAGGAGGAGTGTGGGCAGAGCATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTAAAACTGAGCACATTTAAGCGAGGAGGAGTGTGGGCAGAGCATT  899

seq1  CTCTGACCTTAAAAGCCATAGTTGTCTTTCCAGCAGGCCAAGTCAATTTC  949
      ||||||||||||||||||||| ||||||||  |||||||||||| |||||
seq2  CTCTGACCTTAAAAGCCATAG-TGTCTTTCTGGCAGGCCAAGTC-ATTTC  947

seq1  AAGTGTGAGTTGGAAAAAACAAATTCTTTTTGAGTTAATACAGAGAATTC  999
       ||||||||||||||||||||| |  |||||||| | |||||||| ||||
seq2  -AGTGTGAGTTGGAAAAAACAATTCTTTTTTGAGGT-ATACAGAG-ATTC  994

seq1  TACTAAATTTAAAAGGGCATGAAGTTTTTTTTTTTCCTTTTATTGAATAT  1049
      ||||||||||||||||||||||||||||||||||| ||||||| ||||||
seq2  TACTAAATTTAAAAGGGCATGAAGTTTTTTTTTTT-CTTTTATGGAATAT  1043

seq1  AGTTCTTTTCTCACATCTTTTTAAAAGTATGTT-ATTTTTTTAA-TGCTC  1097
      || ||||||||| |||||||||||    ||||| |||||||||| |||||
seq2  AG-TCTTTTCTCCCATCTTTTTAA---GATGTTAATTTTTTTAAGTGCTC  1089

seq1  AT  1099
      ||
seq2  AT  1091