BAC Information

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BAC

Clone NameB6Ng01-152P12
Chromosome14 (Build37)
Map Location 37,375,748 - 37,376,930
singlet/doubletsinglet
Overlap genenone
Upstream geneGrid1, 4930596D02Rik, LOC100040277, LOC665933, 4930474N05Rik
Downstream geneGcap14, LOC100040341, LOC670331, Rgr, Lrrc21, Lrrc22, Pcdh21, 2610528A11Rik, Ghitm
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152P12.bB6Ng01-152P12.g
ACCDH948411DH948412
length1,1671,177
definitionDH948411|Mus musculus domesticus DNA, BAC clone: B6Ng01-152P12, 5' end.DH948412|Mus musculus domesticus DNA, BAC clone: B6Ng01-152P12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaatgtctgttatttgccaagtacgatgccccagacccttccat
atcatgtctgatttatgagtattctttgagaccacagtgagctgacctgg
cactgacatatgagttactgatgggaagtaatcggaaacaggcatgcaaa
tcagtttcatggcctttgatgtaaattctagctatacaaagctgcccttg
tgtcagcagcagcagtgccattggggaggctgttagaaatgagaatgtgc
ctgcatttctaaagtgaattttgtctaacttgtgtatacttatacactat
ctgttagagaggttgattgggtttcagaggcctggggcagcacccgagat
tctgcatttccaacaagccctgcaaggggtctcagagtgactgctcttgt
attgtaccagatgcctttttgttgagaaattcttcctgctatgcactggg
aaactagtgttttatattgttctctgaaaatttaaaacaaggacaataag
acttcagcattgtaagaaatgcacagtgaaaccaccaaatgaggccactt
cattggcagaaatgtagtttattgggggatagactgccctggtgtctcag
agaatagagaactcaatgggcaaagacctgtcattttactggggttaggt
agcaggtttctggattagaacacctaagagttggtgttagtgatttgaaa
tgacgcaggctttttggttaatcaggaaccagacatactccactgaaggg
agttgactgctggaggtggtaaaggaagcaatggcttttccaacaaacag
aaagcaatcttcctgaattttcaggaaatgtgcagtatatgttcctattt
actagataagaatcctgtttacccggtaagaatttggtctggttcagttc
agaccatcatcttaaatattatcagcagcactgttcatatttgggtcctg
ctttgtggcctgacagtcactagagagaatctctgttaatatctaagcac
ccaagaccaggtattgtctgtcatgattctttcctctaagattttcgcct
tagatattattgaagaagttcacagggtcatggattcagaacctgcccac
tcttaactttctaatgtatcttttccgggagattagagggtcctgaattt
tccacgtgaattgcttt
gaattctcacctgaggaataccaaatggttgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaagtgcaaatcaaaacaacgctgagat
tccatctcacaccagtcagaatggctaacatcaaaaattcaggtgacagc
agatgctggcgaggatatggagaaagaggaacactcctccattgttggtg
ggattgcaagcttatacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactactggaggatcccacaatacctcccctgggc
atatatccagaagatgttccaatgggtaagaaagacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacacagat
gtccttcaacagaggaattgatacagaaaatgtgacacatttatacaatg
gagtactattcagccattaaaaagaataaatttatgaaatctctaggcaa
atggatggacctggatggcatcatcatgaatgaggtaacccaatcacaaa
agaactcacatgatatgtactcactgataagtggatattagcccagaaac
ttagaatacccaagatataagatacaatttgctaaacacatgaaactcaa
gaagaatgaagaccaaagtgtggacactttaccccttcttaaaattggga
acaaaacacccatggaagaagttatagagacaaagtttggagcttagaca
aaagggtggaccatctagagactgccacaactgcggatccatcccataat
tagcctccaaatgctgacaccattgcatacacaagcaagattttgctgaa
aggtccctgatatagctgtctcttgtgagactatgctggggtctagcaaa
cacataagtggatgctcaccgttcagctattggatggatcacagggcccc
agtggaggagctagtgaaagtattcaaaggacctaaaggactgcaaccta
ttcgtggacacaatatgaactaaccagtccccctgggagcttgtttctct
agctgctatgtatcagaagatggcctagttggcatcatggaaaagagggc
ccattggtctgcaactttatagtcttagtacagggtacgccaggtctaag
aatgtggaatggtggtggggttgagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_37375748_37376930
seq2: B6Ng01-152P12.b_49_1215 (reverse)

seq1  AAAGCAAATTCACCTATGTGAAAATCCAGGACCCTCTAAATCTCTACAGG  50
      ||||| ||||||| |    |||||| |||||||||||||   ||| | ||
seq2  AAAGC-AATTCACGT---GGAAAATTCAGGACCCTCTAA---TCTCCCGG  43

seq1  GAAAAAGATAACATTAGAAAGTTAAGAAGTTGGCAGCGTTCCTGATTCAT  100
        ||||||| |||||||||||||||| ||| ||||| ||||   || |||
seq2  --AAAAGAT-ACATTAGAAAGTTAAG-AGTGGGCAG-GTTCTGAATCCAT  88

seq1  GACCCTGTGAACTTCTTC-ATAATATCTATAGGCGAAAATC-TAGAGGGA  148
      |||||||||||||||||| |||||||||| ||||||||||| |||| |||
seq2  GACCCTGTGAACTTCTTCAATAATATCTA-AGGCGAAAATCTTAGA-GGA  136

seq1  AAGAATCATGACAGACAATACCTGGTCCTGGGTGCTTAGAATATTAACAA  198
      ||||||||||||||||||||||||||| ||||||||||| |||||||| |
seq2  AAGAATCATGACAGACAATACCTGGTCTTGGGTGCTTAG-ATATTAAC-A  184

seq1  GAGATTCTCTCTAGTGACTGTCAGGCCACAAAGCAGGACCCAAATATGAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTCTCTCTAGTGACTGTCAGGCCACAAAGCAGGACCCAAATATGAA  234

seq1  CAGTGCTGCTGATAATATTTTAAGATGATGGTCTGAACCTGAACCAGACC  298
      ||||||||||||||||| ||||||||||||||||||| ||||||||||||
seq2  CAGTGCTGCTGATAATA-TTTAAGATGATGGTCTGAA-CTGAACCAGACC  282

seq1  AAATTCTTACCGGGTAAACAGGATTCTTATCTAGTAAATAGGAACATATA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTTACCGGGTAAACAGGATTCTTATCTAGTAAATAGGAACATATA  332

seq1  CTGCACATTTCCTGAAAATTCAGGAAGATTGCTTTCTGTTTGTTGGAAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACATTTCCTGAAAATTCAGGAAGATTGCTTTCTGTTTGTTGGAAAA  382

seq1  GCCATTGCTTCCTTTACCACCTCCAGCAGTCAACTCCCTTCAGTGGAGTA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTGCTTCCTTTACCACCTCCAGCAGTCAACTCCCTTCAGTGGAGTA  432

seq1  TGTCTGGTTCCTGATTAACCAAAAAGCCTGCGTCATTTCAAATCACTAAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGGTTCCTGATTAACCAAAAAGCCTGCGTCATTTCAAATCACTAAC  482

seq1  ACCAACTCTTAGGTGTTCTAATCCAGAAACCTGCTACCTAACCCCAGTAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACTCTTAGGTGTTCTAATCCAGAAACCTGCTACCTAACCCCAGTAA  532

seq1  AATGACAGGTCTTTGCCCATTGAGTTCTCTATTCTCTGAGACACCAGGGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACAGGTCTTTGCCCATTGAGTTCTCTATTCTCTGAGACACCAGGGC  582

seq1  AGTCTATCCCCCAATAAACTACATTTCTGCCAATGAAGTGGCCTCATTTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTATCCCCCAATAAACTACATTTCTGCCAATGAAGTGGCCTCATTTG  632

seq1  GTGGTTTCACTGTGCATTTCTTACAATGCTGAAGTCTTATTGTCCTTGTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTCACTGTGCATTTCTTACAATGCTGAAGTCTTATTGTCCTTGTT  682

seq1  TTAAATTTTCAGAGAACAATATAAAACACTAGTTTCCCAGTGCATAGCAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTTCAGAGAACAATATAAAACACTAGTTTCCCAGTGCATAGCAG  732

seq1  GAAGAATTTCTCAACAAAAAGGCATCTGGTACAATACAAGAGCAGTCACT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATTTCTCAACAAAAAGGCATCTGGTACAATACAAGAGCAGTCACT  782

seq1  CTGAGACCCCTTGCAGGGCTTGTTGGAAATGCAGAATCTCGGGTGCTGCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACCCCTTGCAGGGCTTGTTGGAAATGCAGAATCTCGGGTGCTGCC  832

seq1  CCAGGCCTCTGAAACCCAATCAACCTCTCTAACAGATAGTGTATAAGTAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCTCTGAAACCCAATCAACCTCTCTAACAGATAGTGTATAAGTAT  882

seq1  ACACAAGTTAGACAAAATTCACTTTAGAAATGCAGGCACATTCTCATTTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAGTTAGACAAAATTCACTTTAGAAATGCAGGCACATTCTCATTTC  932

seq1  TAACAGCCTCCCCAATGGCACTGCTGCTGCTGACACAAGGGCAGCTTTGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGCCTCCCCAATGGCACTGCTGCTGCTGACACAAGGGCAGCTTTGT  982

seq1  ATAGCTAGAATTTACATCAAAGGCCATGAAACTGATTTGCATGCCTGTTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTAGAATTTACATCAAAGGCCATGAAACTGATTTGCATGCCTGTTT  1032

seq1  CCGATTACTTCCCATCAGTAACTCATATGTCAGTGCCAGGTCAGCTCACT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGATTACTTCCCATCAGTAACTCATATGTCAGTGCCAGGTCAGCTCACT  1082

seq1  GTGGTCTCAAAGAATACTCATAAATCAGACATGATATGGAAGGGTCTGGG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCTCAAAGAATACTCATAAATCAGACATGATATGGAAGGGTCTGGG  1132

seq1  GCATCGTACTTGGCAAATAACAGACATTTGAATTC  1183
      |||||||||||||||||||||||||||||||||||
seq2  GCATCGTACTTGGCAAATAACAGACATTTGAATTC  1167