BAC Information

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BAC

Clone NameB6Ng01-153C03
Chromosome14 (Build37)
Map Location 22,308,249 - 22,412,534
singlet/doubletdoublet
Overlap geneMyst4
Upstream geneZmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1, Adk
Downstream geneEG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, 1700112E06Rik, EG665075, EG435392
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153C03.bB6Ng01-153C03.g
ACCDH948528DH948529
length9411,000
definitionDH948528|Mus musculus domesticus DNA, BAC clone: B6Ng01-153C03, 5' end.DH948529|Mus musculus domesticus DNA, BAC clone: B6Ng01-153C03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,308,249 - 22,309,195)(22,411,543 - 22,412,534)
sequence
gaattctttcagtaaggctctcattaattcggccaagacatccgccacct
attcttgagttcacacaaaaaaattaaaagcaaaacaagagtcctgctaa
tttagcaacttgggagatgcagctgctgctccctgggcaccagaaaggct
ggcctcagccttcaggcctcagcctgagggaggtctcccaggagttatat
tgtatcctgcagctcaaggcctcattgtgacagctgagtgacttagctgg
cactgtgggctggagaatgataaaggtacaaagaacaggcagcttggtag
ttggggatggcactggatggtgggggcgggtacatggctggttttgccta
ggcctcctatgagcccctacttaggcagctgctgctgcccaaggcacagc
agttctggctgttcactccaccctctttgtaaaacaatcctcgcatcaat
taagtgtaaggcttttgtcgtccatagaaagtggtaattcccatatcctt
tcagttggttgtgtgcctgtctgcctgtctgtccatgtctccagacctat
ccatacctgacctatgactgttgtcttggtgactaccagtaacaccttct
tttttatgcattgtgtttcaggactccttccttctatccctagtatcagt
tcaccctccctgggctctgatatctgatttcctggtgccagtttcctctc
ccactgatggcctatagtgtagtaagatcatgggctcctcagatctgcat
ctgtcaataatctgctgctctcaaaagtgcagtcctaagctgggcgtggt
ttgtacatgcctttaatcccagcactcgggaggcagaggcaggcagattc
tgagttaaaggccagcctggtctacgaagtgagttccaagacagccaggc
tcacatagaaaccctgtctcaaaacccaaaaaagaaaaaaa
cggaattgaggacacttggcttggaagcaacattttctgctttttcagag
acaagctaaacatacatttctcagtcaaaaggcccggtaggtaatccgat
ctgagcagggatactttaacccacggtcaaataaaaagcatgattgcctt
tttccacacacagcctaggctaggccaattactcatgaatataacttttc
agacattacataatttcacacagacttgcttctggtgcctgccaaagaaa
acagccatttgcatcactaggaataaatctacacttgatgagagatgaaa
gttacaaacatgagacagcaaaactctgccctcctctttcatgccaccct
cctgtatgatgttactaataattttaatttttaaaaatcaacattagtga
gacagaatgacatgagctgtaaaatcacatgagccaagggaaaatgaggt
aaattcaaatgtgtatgccccaagaagggtggcagcctcgaagacatgac
caatgacacaaggaagcagaaaaaccaagccttacttaaccacaggacat
aggcgctcgcgctcaagtgccgccccccccccccatctctaggcactggt
gtgctacaccatagtcctattttttaaagtatcttttttaacttgggaga
tttttcatatagctcaggctggtctcaaacttgctacacagccagaactg
ttttgaagtctagatcctcctgtctccatctcctcccatctccaccctac
aagggctagatagaattagggtatgcacctttcatccccaggttatagta
ctgtttttaaaagattctgtcctccttattctaaaactctaaaacttatt
gaggctcaaaacttgacttgacagctaagagcacacattccccttacaca
gacctgcacttgggttcccagcactccggttctggcttaaaccacttcac
tctaggaaggattgctgtcctcttctgggactgtggggatctgggaagca

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_22308249_22309195
seq2: B6Ng01-153C03.b_45_985

seq1  GAATTCTTTCAGTAAGGCTCTCATTCACATTCTGCCAAGACATCCGCCAC  50
      |||||||||||||||||||||||||   |||| |||||||||||||||||
seq2  GAATTCTTTCAGTAAGGCTCTCATT--AATTCGGCCAAGACATCCGCCAC  48

seq1  CTATTCTTGAGTTCACACAAAAAAATTAAAAGCAAAACAAGAGTCCTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCTTGAGTTCACACAAAAAAATTAAAAGCAAAACAAGAGTCCTGCT  98

seq1  AATTTAGCAACTTGGGAGATGCAGCTGCTGCTCCCTGGGCACCAGAAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGCAACTTGGGAGATGCAGCTGCTGCTCCCTGGGCACCAGAAAGG  148

seq1  CTGGCCTCAGCCTTCAGGCCTCAGCCTGAGGGAGGTCTCCCAGGAGTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTCAGCCTTCAGGCCTCAGCCTGAGGGAGGTCTCCCAGGAGTTAT  198

seq1  ATTGTATCCTGCAGCTCAAGGCCTCATTGTGACAGCTGAGTGACTTAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATCCTGCAGCTCAAGGCCTCATTGTGACAGCTGAGTGACTTAGCT  248

seq1  GGCACTGTGGGCTGGAGAATGATAAAGGTACAAAGAACAGGCAGCTTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTGTGGGCTGGAGAATGATAAAGGTACAAAGAACAGGCAGCTTGGT  298

seq1  AGTTGGGGATGGCACTGGATGGTGGGGGCGGGTACATGGCTGGTTTTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGGGATGGCACTGGATGGTGGGGGCGGGTACATGGCTGGTTTTGCC  348

seq1  TAGGCCTCCTATGAGCCCCTACTTAGGCAGCTGCTGCTGCCCAAGGCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCTCCTATGAGCCCCTACTTAGGCAGCTGCTGCTGCCCAAGGCACA  398

seq1  GCAGTTCTGGCCGTTCACTCCACCCTCTTTGTAAAACAATCCTCGCATCA  450
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTCTGGCTGTTCACTCCACCCTCTTTGTAAAACAATCCTCGCATCA  448

seq1  ATTAAGTGTAAGGCTTTTGTCGTCCAAAGAAAGTGGTAATTCCCATATCC  500
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ATTAAGTGTAAGGCTTTTGTCGTCCATAGAAAGTGGTAATTCCCATATCC  498

seq1  TTTCAGTTGGTTGTGTGCCTGTCTGCCTGTCTGTCCATGTCTCCAGACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTTGGTTGTGTGCCTGTCTGCCTGTCTGTCCATGTCTCCAGACCT  548

seq1  ATCCATACCTGACCTATGACTGTTGTCTTGGTGACTACCAGTAACACCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATACCTGACCTATGACTGTTGTCTTGGTGACTACCAGTAACACCTT  598

seq1  CTTTTTTATGCATTGTGTTTCAGGACTCCTTCCTTCTATCCCTAGTATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTATGCATTGTGTTTCAGGACTCCTTCCTTCTATCCCTAGTATCA  648

seq1  GTTCACCCTCCCTGGGCTCTGATATCTGATTTCCTGGTGCCAGTTTCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACCCTCCCTGGGCTCTGATATCTGATTTCCTGGTGCCAGTTTCCTC  698

seq1  TCCCACTGATGGCCTATAGTGTAGTAAGATCATGGGCTCCTCAGATCTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACTGATGGCCTATAGTGTAGTAAGATCATGGGCTCCTCAGATCTGC  748

seq1  ATCTGTCAATAATCTGCTGCTCTCAAAAGTGCAGTCCTAAGCTGGGCGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTCAATAATCTGCTGCTCTCAAAAGTGCAGTCCTAAGCTGGGCGTG  798

seq1  G-TTGTACATGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGAT  849
      | ||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GTTTGTACATGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGA-  847

seq1  TTCTGAGTTCAAGGCCAGCCTGGTCTACGAAGTGAGTTCCAGGACAGCCA  899
      ||||||||| ||||||||||||||||||||||||||||||| ||||||||
seq2  TTCTGAGTTAAAGGCCAGCCTGGTCTACGAAGTGAGTTCCAAGACAGCCA  897

seq1  GGGCTACACATAGAAACCCTGTCTCAAAAAACCAAAAAAAGAAAAAAA  947
       |||| |||||||||||||||||||  |||||| ||||||||||||||
seq2  -GGCT-CACATAGAAACCCTGTCTC--AAAACCCAAAAAAGAAAAAAA  941

seq1: chr14_22411543_22412534
seq2: B6Ng01-153C03.g_76_1064 (reverse)

seq1  TGCTTCCCAG-TACCCACAGTGCCCAGAAGAGGGCAGCAGATCCTTCCTG  49
      |||||||||| | |||||||| ||||||||||| ||||| ||||||||| 
seq2  TGCTTCCCAGATCCCCACAGT-CCCAGAAGAGGACAGCA-ATCCTTCCTA  48

seq1  GAGCTGAAGTGGTTGTAAGCCAAGAAACCGGAGTGCTGGGAA-CCAAGTG  98
      ||| |||||||||| |||||||   ||||||||||||||||| |||||||
seq2  GAG-TGAAGTGGTT-TAAGCCA--GAACCGGAGTGCTGGGAACCCAAGTG  94

seq1  CAGGTCTGTTGTAAGGGGAATGTGTGCTCTTAGCTGTCAAGTC-AGTTTT  147
      |||||||| |||||||||||||||||||||||||||||||||| ||||||
seq2  CAGGTCTG-TGTAAGGGGAATGTGTGCTCTTAGCTGTCAAGTCAAGTTTT  143

seq1  TGGCCTCAATAAGTTTTAGAGTTTTAG-ATTAGGAGGACAGAATCTTTTA  196
        ||||||||||||||||||||||||| || |||||||||||||||||||
seq2  GAGCCTCAATAAGTTTTAGAGTTTTAGAATAAGGAGGACAGAATCTTTTA  193

seq1  AAAACAGTACTAATAACCTGGGGATG-AAGGTGCATACCCTAATTCTATC  245
      ||||||||||| |||||||||||||| |||||||||||||||||||||||
seq2  AAAACAGTACT-ATAACCTGGGGATGAAAGGTGCATACCCTAATTCTATC  242

seq1  TAGCCCTTGTAGGGTGGAGATGGGAGGAGATGGAGACAGGAGGATCTAGA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCTTGTAGGGTGGAGATGGGAGGAGATGGAGACAGGAGGATCTAGA  292

seq1  CTTCAAAACAGTTCTGGCTGTGTAGCAAGTTTGAGACCAGCCTGAGCTAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAAACAGTTCTGGCTGTGTAGCAAGTTTGAGACCAGCCTGAGCTAT  342

seq1  ATGAAAAATCTCCCAAGTT-AAAAAGATACTTTAAAAAATAGGACTATGG  394
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATGAAAAATCTCCCAAGTTAAAAAAGATACTTTAAAAAATAGGACTATGG  392

seq1  TGTAGCACACCAGTGCCTAGAGATGGGGGGGGGGGGCGGCACTTGAGCGC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCACACCAGTGCCTAGAGATGGGGGGGGGGGGCGGCACTTGAGCGC  442

seq1  GAGCGCCTATGTCCTGTGGTTAAGTAAGGCTTGGTTTTTCTGCTTCCTTG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGCCTATGTCCTGTGGTTAAGTAAGGCTTGGTTTTTCTGCTTCCTTG  492

seq1  TGTCATTGGTCATGTCTTCGAGGCTGCCACCCTTCTTGGGGCATACACAT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTGGTCATGTCTTCGAGGCTGCCACCCTTCTTGGGGCATACACAT  542

seq1  TTGAATTTACCTCATTTTCCCTTGGCTCATGTGATTTTACAGCTCATGTC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTTACCTCATTTTCCCTTGGCTCATGTGATTTTACAGCTCATGTC  592

seq1  ATTCTGTCTCACTAATGTTGATTTTTAAAAATTAAAATTATTAGTAACAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTCTCACTAATGTTGATTTTTAAAAATTAAAATTATTAGTAACAT  642

seq1  CATACAGGAGGGTGGCATGAAAGAGGAGGGCAGAGTTTTGCTGTCTCATG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAGGAGGGTGGCATGAAAGAGGAGGGCAGAGTTTTGCTGTCTCATG  692

seq1  TTTGTAACTTTCATCTCTCATCAAGTGTAGATTTATTCCTAGTGATGCAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAACTTTCATCTCTCATCAAGTGTAGATTTATTCCTAGTGATGCAA  742

seq1  ATGGCTGTTTTCTTTGGCAGGCACCAGAAGCAAGTCTGTGTGAAATTATG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTGTTTTCTTTGGCAGGCACCAGAAGCAAGTCTGTGTGAAATTATG  792

seq1  TAATGTCTGAAAAGTTATATTCATGAGTAATTGGCCTAGCCTAGGCTGTG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTCTGAAAAGTTATATTCATGAGTAATTGGCCTAGCCTAGGCTGTG  842

seq1  TGTGGAAAAAGGCAATCATGCTTTTTATTTGACCGTGGGTTAAAGTATCC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAAAAGGCAATCATGCTTTTTATTTGACCGTGGGTTAAAGTATCC  892

seq1  CTGCTCAGATCGGATTACCTACCGGGCCTTTTGACTGAGAAATGTATGTT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCAGATCGGATTACCTACCGGGCCTTTTGACTGAGAAATGTATGTT  942

seq1  TAGCTTGGTCTCTGAAAAAGCAGAAAATGTTGCTTCCAAGCCAAGTGT  992
      |||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTT-GTCTCTGAAAAAGCAGAAAATGTTGCTTCCAAGCCAAGTGT  989