BAC Information

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BAC

Clone NameB6Ng01-153L21
Chromosome14 (Build37)
Map Location 50,408,619 - 50,574,872
singlet/doubletdoublet
Overlap geneLOC667006, Olfr722, Olfr723
Upstream geneLOC666972, Exoc5, 4932432K03Rik, LOC218997, Nat12, 1700011H14Rik, Slc35f4, 3632451O06Rik
Downstream geneOlfr724, LOC100041975, Olfr725, LOC100042882, Olfr726, Olfr727, Olfr728, Olfr729, Olfr730, Olfr731, Olfr732, Olfr733, Olfr734, Olfr735, Tlr11, Olfr736, Olfr737-ps1, Olfr738, Olfr739, Olfr740, Olfr741, GA_x5J8B7U07Q4-325-757, GA_x5J8B7TYL6J-3-280, Olfr742, Olfr743-ps1, Olfr744, Olfr745, Olfr746, Olfr747, Olfr748, Olfr749, Ttc5, Gm288, Rpph1, Parp2, Tep1, EG546611, Osgep, Apex1, Tmem55b, Pnp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153L21.bB6Ng01-153L21.g
ACCDH948967DH948968
length679828
definitionDH948967|Mus musculus domesticus DNA, BAC clone: B6Ng01-153L21, 5' end.DH948968|Mus musculus domesticus DNA, BAC clone: B6Ng01-153L21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,408,619 - 50,409,291)(50,574,316 - 50,574,872)
sequence
gaattccaccattcaactgtaataaatggaatcttgtcctttgcaatgaa
gagcctagataggagagggaggactgaggcagatgcagaggtgtctaaaa
tagtgcagtcctttcatagcatctttaaaagataaactctcggttggaaa
catttacataaaagaaatcttcattttacaggcatgaatgtgttcttgtg
cagtgggttataaattctccttttaaaaagtcttcaacatcgaaggtgtc
atgttcctcaatgaataaattctttcattaaaaatgaaatttggaaacta
tgttcacaatagcccccaagattcacacatgtttcagacaatgttcttat
gtctacctttgtgtgtgtgtgtgtgtgtgtgtgtgtttttttttttgttt
gtttgggcagatcaatgattctcagagtgaatattagtgacataagtgca
tacttgctgtgtttggccccaagggactcttacactgtagcccatatttg
tttgtctgaaatgcacaatacccttacttcagcctctgaagtgtagacat
tgcagatgtaggtcactgggctaatcaaaagttgctctttttcacatatc
tgggacactggaataaaagaaacaagaggggtcagatatttctctttatt
gtagattttatgaagcactgtgagcttaa
gaattccacagcaaggctgacctttgtactcttgcttaactaatttctca
tgcttgcaccttcaggttcacacacatctctacaatggagttctgtctta
ggttttgctgctttgataaaacactgtgaccaacagcaaatacaggagga
aagccttcagtttgtcttacacctcttaagtacacactctttacctgaag
gaagacaagacagaagcctagggacaggaactagagcatggatgaacact
gcttactagaattcagtttgctggtattttattgagactgtttcccttta
tgctcatcagacttattgtctcttaactgtctttgtttttgttccaaact
gcttttgttattgaagtaatgaaggcattgttgaacactttttggttgca
atctctatatacataatttatgaaggtctggttgaactttgctgtaaatc
catctaggactagatttgggtgcatgttttagacgtctcttggaaggtct
tggtcaaaaactcacaagagattcttgtgtcaatattgagattttaggtg
atcttcagctcttggaggaagcactgtcagcccagataaatatatatatt
tatattttaaaagcctatatacacatatatattaggatatatatatatat
gtatatatatatatatcgcactatatatgtagtaggatttttattttaag
taaacagttaatattatgattccttgtggcttttaaaagcatcgttattg
taaattttacatacttcccacattctcttgtatttcacctccctgcacca
tccataaagaaatacactttttgtttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_50408619_50409291
seq2: B6Ng01-153L21.b_40_718

seq1  GAATTCCACCATTCAACTGTAATAAATGGAATCTTGTCCTTTGCAATGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCATTCAACTGTAATAAATGGAATCTTGTCCTTTGCAATGAA  50

seq1  GAGCCTAGATAGGAGAGGGAGGACTGAGGCAGATGCAGAGGTGTCTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTAGATAGGAGAGGGAGGACTGAGGCAGATGCAGAGGTGTCTAAAA  100

seq1  TAGTGCAGTCCTTTCATAGCATCTTTAAAAGATAAACTCTCGGTTGGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCAGTCCTTTCATAGCATCTTTAAAAGATAAACTCTCGGTTGGAAA  150

seq1  CATTTACATAAAAGAAATCTTCATTTTACAGGCATGAATGTGTTCTTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACATAAAAGAAATCTTCATTTTACAGGCATGAATGTGTTCTTGTG  200

seq1  CAGTGGGTTATAAATTCTCCTTTTAAAAAGTCTTCAACATCGAAGGTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGGTTATAAATTCTCCTTTTAAAAAGTCTTCAACATCGAAGGTGTC  250

seq1  ATGTTCCTCAATGAATAAATTCTTTCATTAAAAATGAAATTTGGAAACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCCTCAATGAATAAATTCTTTCATTAAAAATGAAATTTGGAAACTA  300

seq1  TGTTCACAATAGCCCCCAAGATTCACACATGTTTCAGACAATGTTCTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCACAATAGCCCCCAAGATTCACACATGTTTCAGACAATGTTCTTAT  350

seq1  GTCTACCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTTTTTTTTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACCTTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTTTTTTTTGTTT  400

seq1  GTTTGGGCAGATCAATGATTCTCAGAGTGAATATTAGTGACATAAGTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGGCAGATCAATGATTCTCAGAGTGAATATTAGTGACATAAGTGCA  450

seq1  TACTTGCTGTGTTTGGCCCCAAGGGACTCTTACACTGTAGCCCATATTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGCTGTGTTTGGCCCCAAGGGACTCTTACACTGTAGCCCATATTTG  500

seq1  TTTGTCTGAAATGCACAATACCCTTACTTCAGCCTCTGAAGTGTAGACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTGAAATGCACAATACCCTTACTTCAGCCTCTGAAGTGTAGACAT  550

seq1  TGCAGATGTAGGTCACTGGGCTAATCAAAAGTTGCTC-TTTTCACATATC  599
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGCAGATGTAGGTCACTGGGCTAATCAAAAGTTGCTCTTTTTCACATATC  600

seq1  TGGGACACTGGAAT-AAAGAAACAAGA-GGGTCAGATA-TTCTC-TTATT  645
      |||||||||||||| |||||||||||| |||||||||| ||||| |||||
seq2  TGGGACACTGGAATAAAAGAAACAAGAGGGGTCAGATATTTCTCTTTATT  650

seq1  GTAGA-TTTATGAAGCACTGTGAGCTTAA  673
      ||||| |||||||||||||||||||||||
seq2  GTAGATTTTATGAAGCACTGTGAGCTTAA  679

seq1: chr14_50574316_50574872
seq2: B6Ng01-153L21.g_71_627 (reverse)

seq1  TGAAGATCACCTAAAATCTCAATATTGACACAAGAATCTCTTGTGAGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATCACCTAAAATCTCAATATTGACACAAGAATCTCTTGTGAGTTT  50

seq1  TTGACCAAGACCTTCCAAGAGACGTCTAAAACATGCACCCAAATCTAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCAAGACCTTCCAAGAGACGTCTAAAACATGCACCCAAATCTAGTC  100

seq1  CTAGATGGATTTACAGCAAAGTTCAACCAGACCTTCATAAATTATGTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATGGATTTACAGCAAAGTTCAACCAGACCTTCATAAATTATGTATA  150

seq1  TAGAGATTGCAACCAAAAAGTGTTCAACAATGCCTTCATTACTTCAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATTGCAACCAAAAAGTGTTCAACAATGCCTTCATTACTTCAATAA  200

seq1  CAAAAGCAGTTTGGAACAAAAACAAAGACAGTTAAGAGACAATAAGTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCAGTTTGGAACAAAAACAAAGACAGTTAAGAGACAATAAGTCTG  250

seq1  ATGAGCATAAAGGGAAACAGTCTCAATAAAATACCAGCAAACTGAATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCATAAAGGGAAACAGTCTCAATAAAATACCAGCAAACTGAATTCT  300

seq1  AGTAAGCAGTGTTCATCCATGCTCTAGTTCCTGTCCCTAGGCTTCTGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGCAGTGTTCATCCATGCTCTAGTTCCTGTCCCTAGGCTTCTGTCT  350

seq1  TGTCTTCCTTCAGGTAAAGAGTGTGTACTTAAGAGGTGTAAGACAAACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCCTTCAGGTAAAGAGTGTGTACTTAAGAGGTGTAAGACAAACTG  400

seq1  AAGGCTTTCCTCCTGTATTTGCTGTTGGTCACAGTGTTTTATCAAAGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTTCCTCCTGTATTTGCTGTTGGTCACAGTGTTTTATCAAAGCAG  450

seq1  CAAAACCTAAGACAGAACTCCATTGTAGAGATGTGTGTGAACCTGAAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCTAAGACAGAACTCCATTGTAGAGATGTGTGTGAACCTGAAGGT  500

seq1  GCAAGCATGAGAAATTAGTTAAGCAAGAGTACAAAGGTCAGCCTTGCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCATGAGAAATTAGTTAAGCAAGAGTACAAAGGTCAGCCTTGCTGT  550

seq1  GGAATTC  557
      |||||||
seq2  GGAATTC  557