BAC Information

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BAC

Clone NameB6Ng01-154O21
Chromosome14 (Build37)
Map Location 20,029,871 - 20,145,318
singlet/doubletdoublet
Overlap geneLOC619996
Upstream geneNr1d2, LOC632287, Rpl15, Nkiras1, Ube2e1, LOC627717, LOC238963, Ube2e2, LOC627741, LOC100042299, LOC675069, LOC100042322, LOC632470, EG632477, EG632498, EG667341, LOC667344
Downstream geneEG434616, LOC675165, 1700110I01Rik, EG664814, LOC100039452, LOC100038983, LOC100039441, EG432825, LOC673583, EG664855, Nid2, 2700060E02Rik, LOC100039534, Gng2, 1810063B07Rik, Kcnk5, LOC100039106, Kcnk16, Nudt13, Ecd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154O21.bB6Ng01-154O21.g
ACCDH949844DH949845
length1,1031,122
definitionDH949844|Mus musculus domesticus DNA, BAC clone: B6Ng01-154O21, 5' end.DH949845|Mus musculus domesticus DNA, BAC clone: B6Ng01-154O21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(20,144,194 - 20,145,318)(20,029,871 - 20,030,981)
sequence
gaattcaaaagctcacttttaatatatacttgagtttaacaccaatgttt
gaaactttcagggattttacaactcatcgacatatagttatttgttcctt
ggacccatacagatcattttcaacatatcgcatcagaaccatcctagcct
caccacaaacgttagggcttccatatctctctgcttttccactacctctc
tgcaacattccatcataccttccatcccctccctccctaagtgagtctgg
acctgggtgctgagaataaaacccaggtcctttgcaagaacaggtgctct
taacctcggggccaactctccatctgcctcccaaactaggatccacacct
ttcaaatctcactgagggacttgaactctggccctctgagtccccgcgag
tttccggagctcggctaggtgggtgggaatgtggtgcgctggggaggtat
agatacctttgctcagcgcctgcgcagaggggttgggaaacagcacctac
agctcctcccttccctgccatggcctagagcgactagcttgggcactggc
cacagacagtctggcagttctaaacctcaccccaagctgaccactgtaac
ccggactctgcctctcacaggttgttcagtttatccctcaggttattgta
ccactcaccagcaacacagtctgcccccagatcggtgccacaagcctggg
ctctgcctcttccctgcctaagtttcgtgcttttcctgttgctccacact
aggactctgcctctcatgctccaagccccttcctcaatctatttcctcta
ctcctggactccgctttttgtgctcctaagcacggtcctcaccccaatta
ctaaagaccctggctccgccttcatggtttctaagttccgccctcataac
tgttgctccctccgggctccgctctcgcgcaacaagcctcgccctcagcc
tatttctcacatccggatctgcctctgggccctgagcttcggcctcacgc
tggcttcacacgagcctcgcctcccactgtggctctccagggctcctggt
tcttcagtagtactctgtgcacgggacagcagtgacttactgatagggtg
gga
gaattcttctgacaaatggaaatttcccaccgatactttaaagaacagcc
aagttgcactcatacaaagatttatcaaggcctaggaaataggaggtttg
tggtattggattattcatgagaaagtctgctagagcagaaccccctggtg
ctagctttcacaaggctcaaaggagtagcacaaattgtgactagggtgtg
aaatccttacctgtcattagctgaccctaggcagggctgttttatcttta
ctgtaaatcttacctggtttctgtaagtccttttaaagtcattcctttgt
gttgtgtcaggtaacttcaatgtactttgcctgccatgacatcctatccc
tttgttttctgtattatataagactggtatacactttgtgaaaatacact
cagattctacacaatctcttgtgtcgcttctgtttgtcattcactgactc
ctgtccacctgcaactaaagacccattctacgcaggcagggaccaaaaag
ggtctgcggcaaagccacattcattgaaaagggaaatctgaacctccagc
accatccttcatagagacctgtgtgccaccacttggtctagtccagaaag
ctcagaactggaagttcaatttctggctattcccaactggcaggtgacat
tgagccctcctcttaatctctctaagccttagtatcctattactaaaatg
agtagggattcagtggggttgagacactcttacaagtataccttccacag
ttcctccttgtcaccacaggaatgggggctgttagcatttatgacttctg
acatctaaaccagcatgagatttggagaataaaccacaaattgcacaaga
cttagtagccatttcaaagttttaaagatttttttccaacatatttattt
cagtgacatggtagtttcatgcaaagcaactattaaaggataattcagca
actttttagtaatttaattgtttggtgtaatttagcttattaagaagaat
aaatgttgaggcatcttgtttcagtttactgaagatgagaagctgttcaa
agaaattctaaaattgtcggtttcatttattcagaaattccatttttatg
gacggagtcaggcatgaaattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_20144194_20145318
seq2: B6Ng01-154O21.b_48_1150 (reverse)

seq1  TCCCACCCCTACCCAGTAAAGTTCACTGCTGGTCCCGTGCAACCAGAGTA  50
      ||||| |||||  ||||||   |||||||| ||||||||||  |||||||
seq2  TCCCA-CCCTA-TCAGTAA--GTCACTGCT-GTCCCGTGCA--CAGAGTA  43

seq1  CTACTGGAAGGACCAGTGAGCCCTGGGAGAGCCCACAAGTGGGAGGCGGG  100
      ||||| |||| ||||| ||||||| |||||| |||| ||||||||||| |
seq2  CTACT-GAAGAACCAG-GAGCCCT-GGAGAG-CCAC-AGTGGGAGGCGAG  88

seq1  GCCTCGGTGTGAAGCCAGCGGTTGAGGGCGGAGCTCAGGGGCCCAGAGGG  150
      | ||| ||||||||||||||  ||||| || |||||| ||||||||| ||
seq2  G-CTC-GTGTGAAGCCAGCG--TGAGGCCGAAGCTCA-GGGCCCAGA-GG  132

seq1  CAGATCCCGGATGTGGAGAAATAGGCTGAGGGCGAGGCTTGTTGCGCGAG  200
      ||||| |||||||| |||||||||||||||||||||||||||||||||||
seq2  CAGAT-CCGGATGT-GAGAAATAGGCTGAGGGCGAGGCTTGTTGCGCGAG  180

seq1  AGGCGGAGCCCGGAGGGGAGCAACAGTTATGAGGGCGGAACTTAGAAACC  250
      | |||||||||||| |||||||||||||||||||||||||||||||||||
seq2  A-GCGGAGCCCGGA-GGGAGCAACAGTTATGAGGGCGGAACTTAGAAACC  228

seq1  ATGAAGGCGGAGCCAGGGTCTTTAGTAATTGGGGTGAGGACCGTGCTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGCGGAGCCAGGGTCTTTAGTAATTGGGGTGAGGACCGTGCTTAG  278

seq1  GAGCACAAAAAGCGGAGTCCAGGAGTAGAGGAAATAGATTGAGGAAGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACAAAAAGCGGAGTCCAGGAGTAGAGGAAATAGATTGAGGAAGGGG  328

seq1  CTTGGAGCATGAGAGGCAGAGTCCTAGTGTGGAGCAACAGGAAAAGCACG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAGCATGAGAGGCAGAGTCCTAGTGTGGAGCAACAGGAAAAGCACG  378

seq1  AAACTTAGGCAGGGAAGAGGCAGAGCCCAGGCTTGTGGCACCGATCTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTAGGCAGGGAAGAGGCAGAGCCCAGGCTTGTGGCACCGATCTGGG  428

seq1  GGCAGACTGTGTTGCTGGTGAGTGGTACAATAACCTGAGGGATAAACTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGACTGTGTTGCTGGTGAGTGGTACAATAACCTGAGGGATAAACTGA  478

seq1  ACAACCTGTGAGAGGCAGAGTCCGGGTTACAGTGGTCAGCTTGGGGTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCTGTGAGAGGCAGAGTCCGGGTTACAGTGGTCAGCTTGGGGTGAG  528

seq1  GTTTAGAACTGCCAGACTGTCTGTGGCCAGTGCCCAAGCTAGTCGCTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGAACTGCCAGACTGTCTGTGGCCAGTGCCCAAGCTAGTCGCTCTA  578

seq1  GGCCATGGCAGGGAAGGGAGGAGCTGTAGGTGCTGTTTCCCAACCCCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATGGCAGGGAAGGGAGGAGCTGTAGGTGCTGTTTCCCAACCCCTCT  628

seq1  GCGCAGGCGCTGAGCAAAGGTATCTATACCTCCCCAGCGCACCACATTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCAGGCGCTGAGCAAAGGTATCTATACCTCCCCAGCGCACCACATTCC  678

seq1  CACCCACCTAGCCGAGCTCCGGAAACTCGCGGGGACTCAGAGGGCCAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACCTAGCCGAGCTCCGGAAACTCGCGGGGACTCAGAGGGCCAGAG  728

seq1  TTCAAGTCCCTCAGTGAGATTTGAAAGGTGTGGATCCTAGTTTGGGAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTCCCTCAGTGAGATTTGAAAGGTGTGGATCCTAGTTTGGGAGGC  778

seq1  AGATGGAGAGTTGGCCCCGAGGTTAAGAGCACCTGTTCTTGCAAAGGACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGAGAGTTGGCCCCGAGGTTAAGAGCACCTGTTCTTGCAAAGGACC  828

seq1  TGGGTTTTATTCTCAGCACCCAGGTCCAGACTCACTTAGGGAGGGAGGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTTATTCTCAGCACCCAGGTCCAGACTCACTTAGGGAGGGAGGGG  878

seq1  ATGGAAGGTATGATGGAATGTTGCAGAGAGGTAGTGGAAAAGCAGAGAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGGTATGATGGAATGTTGCAGAGAGGTAGTGGAAAAGCAGAGAGA  928

seq1  TATGGAAGCCCTAACGTTTGTGGTGAGGCTAGGATGGTTCTGATGCGATA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAGCCCTAACGTTTGTGGTGAGGCTAGGATGGTTCTGATGCGATA  978

seq1  TGTTGAAAATGATCTGTATGGGTCCAAGGAACAAATAACTATATGTCGAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAAAATGATCTGTATGGGTCCAAGGAACAAATAACTATATGTCGAT  1028

seq1  GAGTTGTAAAATCCCTGAAAGTTTCAAACATTGGTGTTAAACTCAAGTAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGTAAAATCCCTGAAAGTTTCAAACATTGGTGTTAAACTCAAGTAT  1078

seq1  ATATTAAAAGTGAGCTTTTGAATTC  1125
      |||||||||||||||||||||||||
seq2  ATATTAAAAGTGAGCTTTTGAATTC  1103

seq1: chr14_20029871_20030981
seq2: B6Ng01-154O21.g_80_1186

seq1  ATGGAAATTTCCCACCGATACTTTAAAGAACAGCCAAGTTGCACTCATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAATTTCCCACCGATACTTTAAAGAACAGCCAAGTTGCACTCATAC  50

seq1  AAAGATTTATCAAGGCCTAGGAAATAGGAGGTTTGTGGTATTGGATTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTTATCAAGGCCTAGGAAATAGGAGGTTTGTGGTATTGGATTATT  100

seq1  CATGAGAAAGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCACAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGAAAGTCTGCTAGAGCAGAACCCCCTGGTGCTAGCTTTCACAAGG  150

seq1  CTCAAAGGAGTAGCACAAATTGTGACTAGGGTGTGAAATCCTTACCTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGGAGTAGCACAAATTGTGACTAGGGTGTGAAATCCTTACCTGTC  200

seq1  ATTAGCTGACCCTAGGCAGGGCTGTTTTATCTTTACTGTAAATCTTACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCTGACCCTAGGCAGGGCTGTTTTATCTTTACTGTAAATCTTACCT  250

seq1  GGTTTCTGTAAGTCCTTTTAAAGTCATTCCTTTGTGTTGTGTCAGGTAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTGTAAGTCCTTTTAAAGTCATTCCTTTGTGTTGTGTCAGGTAAC  300

seq1  TTCAATGTACTTTGCCTGCCATGACATCCTATCCCTTTGTTTTCTGTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGTACTTTGCCTGCCATGACATCCTATCCCTTTGTTTTCTGTATT  350

seq1  ATATAAGACTGGTATACACTTTGTGAAAATACACTCAGATTCTACACAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGACTGGTATACACTTTGTGAAAATACACTCAGATTCTACACAAT  400

seq1  CTCTTGTGTCGCTTCTGTTTGTCATTCACTGACTCCTGTCCACCTGCAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTGTCGCTTCTGTTTGTCATTCACTGACTCCTGTCCACCTGCAAC  450

seq1  TAAAGACCCATTCTACGCAGGCAGGGACCAAAAAGGGTCTGCGGCAAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGACCCATTCTACGCAGGCAGGGACCAAAAAGGGTCTGCGGCAAAGC  500

seq1  CACATTCATTGAAAAGGGAAATCTGAACCTCCAGCACCATCCTTCATAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTCATTGAAAAGGGAAATCTGAACCTCCAGCACCATCCTTCATAGA  550

seq1  GACCTGTGTGCCACCACTTGGTCTAGTCCAGAAAGCTCAGAACTGGAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGTGTGCCACCACTTGGTCTAGTCCAGAAAGCTCAGAACTGGAAGT  600

seq1  TCAATTTCTGGCTATTCCCAACTGGCAGGTGACATTGAGCCCTCCTCTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTCTGGCTATTCCCAACTGGCAGGTGACATTGAGCCCTCCTCTTA  650

seq1  ATCTCTCTAAGCCTTAGTATCCTATTACTAAAATGAGTAGGGATTCAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCTAAGCCTTAGTATCCTATTACTAAAATGAGTAGGGATTCAGTG  700

seq1  GGGTTGAGACACTCTTACAAGTATACCTTCCACAGTTCCTCCTTGTCACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGAGACACTCTTACAAGTATACCTTCCACAGTTCCTCCTTGTCACC  750

seq1  ACAGGAATGGGGGCTGTTAGCATTTATGACTTCTGACATCTAAACCAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAATGGGGGCTGTTAGCATTTATGACTTCTGACATCTAAACCAGCA  800

seq1  TGAGATTTGGAGAATAAACCACAAATTGCACAAGACTTAGTAGCCATTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTTGGAGAATAAACCACAAATTGCACAAGACTTAGTAGCCATTTC  850

seq1  AAAGTTTTAAAGATTTTTTTCCAACATATTTTATTTCAGGTGACATGGTA  900
      |||||||||||||||||||||||||||| ||||||||| |||||||||||
seq2  AAAGTTTTAAAGATTTTTTTCCAACATA-TTTATTTCA-GTGACATGGTA  898

seq1  GTTTCATGCAAAGCAACTATTAAAGGATAATTCAGCAACTTTTTAGTAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATGCAAAGCAACTATTAAAGGATAATTCAGCAACTTTTTAGTAAT  948

seq1  TATATTGTTTGGTGTATTTTAGCTTATT-AGTAGAATAAATG-TGAAGCA  998
      |  ||||||||||||| ||||||||||| || |||||||||| ||| |||
seq2  TTAATTGTTTGGTGTAATTTAGCTTATTAAGAAGAATAAATGTTGAGGCA  998

seq1  TCTTGTTTCAG-TTACTGAAGATGAGAAGCTGTTCAAAGAAAATTCTTAA  1047
      ||||||||||| ||||||||||||||||||||||||||| |||||||  |
seq2  TCTTGTTTCAGTTTACTGAAGATGAGAAGCTGTTCAAAG-AAATTCT--A  1045

seq1  AAATTGTCAGTTTCCATTTATCCAAGATATCCATTTTTATGGACTGAGTC  1097
      |||||||| |||| ||||||| ||  |  ||||||||||||||| |||||
seq2  AAATTGTCGGTTT-CATTTATTCAGAAATTCCATTTTTATGGACGGAGTC  1094

seq1  AGCCCATGAAATTT  1111
      ||  ||||||||||
seq2  AG-GCATGAAATTT  1107