BAC Information

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BAC

Clone NameB6Ng01-155B02
Chromosome14 (Build37)
Map Location 78,364,473 - 78,365,622
singlet/doubletsinglet
Overlap geneEpsti1
Upstream geneLOC100043201, 9030625A04Rik, Ccdc122, D230005D02Rik, LOC100043755, LOC676171, EG629678, Gm1587, Dnajc15
Downstream geneAU021034, Tnfsf11, LOC219180, Akap11, Dgkh, LOC673649, 1300010F03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155B02.bB6Ng01-155B02.g
ACCDH949946DH949947
length1,1351,170
definitionDH949946|Mus musculus domesticus DNA, BAC clone: B6Ng01-155B02, 5' end.DH949947|Mus musculus domesticus DNA, BAC clone: B6Ng01-155B02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgccacaaggtatgaaggcaaggggaaagcatggttggtata
ggagagaatggttgccacagattccagggagaaataagccagaaggctca
agaactaaccctgaactgtgaggcgctttcgtcaactggagtatcaatgg
caaactgggtaaggctggttaatgtccagtttgtgtagcatctctggccc
ccagattctagtagcattacctaaatcagtggctctcaaccttcctaatg
ctgcaacactttaattcagttcctcatgttgtggtgacccccccccccat
aaaattatttttgttggtatttcataactgtaattttgctactattatga
atgataatgtaaatatctgtattttctaaaggtcttgggtgaccctgtta
aagggtcactcaacccctcaaaatgtcatgacccataggttcagaagtgc
tgacctagacagtgggacaaatagaaatgtccctaacaggaagctggtgg
cacttctggtagaagagcaactaagaacatttgtgtgtcaaattggcaag
ctgtgggggccactgggcctaaaaggctgcgaaaggaggctttgagatct
cttgtattttcctgggaccagacagatggtggtatgcagcatagatccaa
aagaattgagagcaaagaatcctttaaaaccccggtctaggcaccgagtg
atgaggaattcatcaagagagactagatgttgaaaaacgtttagaagtaa
agatggccaggtttggttattgcttgccaacactacacccctcttagaag
aaaaggagcgctcttgcttcccatccttgtaagcactgtgttttattttt
ttccatttctgatgtggtgctgcatactctaaacttgtcagtgtgagctc
tatatttgtgtcaccccagatcggccatctcagcccgtggctgcagtccc
tgaggagagactgagaaactgcgtgtcacagacttaaattatgtgtggag
ggcagtctaagcagtctgatattcccatgtcgtgcaggagcaataggaca
gatggaaaaggagcgtttagggtctgctggcaggtcgtcttgctttctag
tggggagcgcacagactgttctggcttggctccgt
gaattctgggaacagccctagtctacggttacagagaaaggaatttagaa
ggtggttggatactgtgttcatttaagaaattaatagcagtagactcacc
tctaagacatatgagttccctagccatgagtccttggctggatgtacagt
accaaacataaactttgtcctgcagagtggccttaaatccaattagaaag
tagttggctactcccatagcatgcatactcttattgtacccatgcaacta
tcttgctgtcagtcactattatagctcgtaggcttcacaacttgataagg
ctattcctatcctctaaaggtactcaaatctaaagattcagtgctgggat
tcacctaggagttagaagattcagggcttttctttctccatttgggttac
ctcactcagtctagagtttttcacttctatcttacaactttctaattctt
ttctttaaaactgaataaaatttaatcatgtatggatattgtgttgattt
ggatgagaaatgtctcccatagtcacattatttgaacacttggtccccag
ttggtggcgctctatggaacttttagagagtggaaccttgctggaggaag
tatggcactggcatctttgagtgtatagtcttgctcttctttgtgttctc
tctctgactcctgtgtgagaaatatgattagccaggcatttgctcctgtg
gctatccctcctggcctgttgccgtgcttcccctgactgtcttaatgggt
tctatccttctgtaacccttcttccctttaaggtatttatgtcagagcgt
tctatctgagcagcagggacataatttatactggtttgctgttttcttta
ccagtcatcagttgatggacacctaggctgtatgtgtatctttgatattt
tgagtagagcagtgatgaacatggatgagcacctagctctgtagtagcaa
gtagggtctaactatttgcccaggggtgggtggggctggcttacccagat
ctcctatctaatatctatctaaatgcttgtcaatttgtttttcctaccta
gctattccacacgggggtggagaaggcatttcacaattccttattcgctt
ttctactggagtttctcatcacgagaaacagagttcaaacaagggggtca
gcatactcatctagtgctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_78364473_78365622
seq2: B6Ng01-155B02.b_49_1183

seq1  GAATTCATTGCCACAAGGTATGAAGGCAAGGGGAAAGCATGGTTGGTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGCCACAAGGTATGAAGGCAAGGGGAAAGCATGGTTGGTATA  50

seq1  GGAGAGAATGGTTGCCACAGATTCCAGGGAGAAATAAGCCAGAAGGCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAATGGTTGCCACAGATTCCAGGGAGAAATAAGCCAGAAGGCTCA  100

seq1  AGAACTAACCCTGAACTGTGAGGCGCTTTCGTCAACTGGAGTATCAATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTAACCCTGAACTGTGAGGCGCTTTCGTCAACTGGAGTATCAATGG  150

seq1  CAAACTGGGTAAGGCTGGTTAATGTCCAGTTTGTGTAGCATCTCTGGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTGGGTAAGGCTGGTTAATGTCCAGTTTGTGTAGCATCTCTGGCCC  200

seq1  CCAGATTCTAGTAGCATTACCTAAATCAGTGGCTCTCAACCTTCCTAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATTCTAGTAGCATTACCTAAATCAGTGGCTCTCAACCTTCCTAATG  250

seq1  CTGCAACACTTTAATTCAGTTCCTCATGTTGTGGTGACCCCCCCCCCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAACACTTTAATTCAGTTCCTCATGTTGTGGTGACCCCCCCCCCCAT  300

seq1  AAAATTATTTTTGTTGGTATTTCATAACTGTAATTTTGCTACTATTATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTATTTTTGTTGGTATTTCATAACTGTAATTTTGCTACTATTATGA  350

seq1  ATGATAATGTAAATATCTGTATTTTCTAAAGGTCTTGGGTGACCCTGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAATGTAAATATCTGTATTTTCTAAAGGTCTTGGGTGACCCTGTTA  400

seq1  AAGGGTCACTCAACCCCTCAAAATGTCATGACCCATAGGTTCAGAAGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTCACTCAACCCCTCAAAATGTCATGACCCATAGGTTCAGAAGTGC  450

seq1  TGACCTAGACAGTGGGACAAATAGAAATGTCCCTAACAGGAAGCTGGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTAGACAGTGGGACAAATAGAAATGTCCCTAACAGGAAGCTGGTGG  500

seq1  CACTTCTGGTAGAAGAGCAACTAAGAACATTTGTGTGTCAAATTGGCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTGGTAGAAGAGCAACTAAGAACATTTGTGTGTCAAATTGGCAAG  550

seq1  CTGTGGGGGCCACTGGGCCTAAAAGGCTGCGAAAGGAGGCTTTGAGATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGGGCCACTGGGCCTAAAAGGCTGCGAAAGGAGGCTTTGAGATCT  600

seq1  CTTGTATTTTCCTGGGACCAGACAGATGGTGGTATGCAGCATAGATCCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATTTTCCTGGGACCAGACAGATGGTGGTATGCAGCATAGATCCAA  650

seq1  AAGAATTGAGAGCAAAGAATCCTTTAAAACCCCGGTCTAGGCACCGAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTGAGAGCAAAGAATCCTTTAAAACCCCGGTCTAGGCACCGAGTG  700

seq1  ATGAGGAATTCATCAAGAGAGACTAGATGTTGAAAAACGTTTAGAAGGTA  750
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATGAGGAATTCATCAAGAGAGACTAGATGTTGAAAAACGTTTAGAA-GTA  749

seq1  AAGATGGCCAGGTTTGGTTATTGCTTGCCAACACTACACCCCTCTTAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGCCAGGTTTGGTTATTGCTTGCCAACACTACACCCCTCTTAGAA  799

seq1  GAAAAGGAGCGCTCTTGCTTCCCATCCTTGTAAGCACTGTGTTTTATTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGAGCGCTCTTGCTTCCCATCCTTGTAAGCACTGTGTTTTATTTT  849

seq1  TTTCCATTTCTGATGTGGTGCTGCATACTCTAAACTTGTCAGTGTGAGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATTTCTGATGTGGTGCTGCATACTCTAAACTTGTCAGTGTGAGCT  899

seq1  CTATAATTTGTGTCACCCCAGATCGGCCATCTCAGCCCCGTGGCTGCAGG  950
      |||| |||||||||||||||||||||||||||||| |||||||||||| |
seq2  CTAT-ATTTGTGTCACCCCAGATCGGCCATCTCAG-CCCGTGGCTGCA-G  946

seq1  TCCCTGAGGGAGAGAACTGAGAAACTGCGTGTCACAGACTTAAATTATGT  1000
      ||||||| |||||| |||||||||||||||||||||||||||||||||||
seq2  TCCCTGA-GGAGAG-ACTGAGAAACTGCGTGTCACAGACTTAAATTATGT  994

seq1  GTGGAGGGCAGGTCCTAAGCAAGTCTGGATATCCCCATGGCCGTGCAGGA  1050
      |||||||||||   |||||| ||||| ||||| ||||| | |||||||||
seq2  GTGGAGGGCAG--TCTAAGC-AGTCT-GATATTCCCAT-GTCGTGCAGGA  1039

seq1  GCAATAGGACAGATGGGAATAGGAGCGTTTAGGGTTCTGCTTGCCAGGTC  1100
      |||||||||||||| |||| |||||||||||||| ||||| || ||||||
seq2  GCAATAGGACAGAT-GGAAAAGGAGCGTTTAGGG-TCTGC-TGGCAGGTC  1086

seq1  GTCTTGCTTTCTAGTTGGGAGCGCACCAGGACTGTGTCTG--CTGGCTCC  1148
      ||||||||||||||| ||||||||||   |||||| ||||   |||||||
seq2  GTCTTGCTTTCTAGTGGGGAGCGCAC--AGACTGT-TCTGGCTTGGCTCC  1133

seq1  GT  1150
      ||
seq2  GT  1135