BAC Information

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BAC

Clone NameB6Ng01-155G15
Chromosome14 (Build37)
Map Location 45,734,715 - 45,871,015
singlet/doubletdoublet
Overlap gene5730420B22Rik, LOC100041611
Upstream gene4930503E14Rik, EG666647, EG624862, EG666660, EG666667, EG546250, EG666675, LOC100041494, LOC100041497, EG666678, LOC676402, BC061237, LOC434476, EG666707, LOC100042570, LOC666723, LOC673290, EG666725, EG624966, EG666744, Ptgdr, Ptger2, LOC100041591
Downstream gene6330416L11Rik, Ero1l, Psmc6, Styx, Gnpnat1, Plekhc1, EG382884, Ddhd1, EG637379, LOC666834, LOC100041685, LOC625377, LOC218963
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155G15.bB6Ng01-155G15.g
ACCDH950203DH950204
length1,0371,093
definitionDH950203|Mus musculus domesticus DNA, BAC clone: B6Ng01-155G15, 5' end.DH950204|Mus musculus domesticus DNA, BAC clone: B6Ng01-155G15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,869,971 - 45,871,015)(45,734,715 - 45,735,814)
sequence
gaattccataaaataaggactttaaaaaattgataggggctaaccacatg
tttgtttctgaatgggagacatactaacccgaggatagaattttaatcgg
tgaccttttttccttttggtgttaaaaatgaaaaagaaaatctttttttt
ttggagagtctgtgtagttaacaccatcaacagcattacacagcagactg
atgactttaaaagttttcaaatacttattgacttattaatgtgtgttttc
ttaagcacatacaccactcactgcacagtttactctcttcccaccgtgtg
gatgtggggatcaaactcaggttgtcaggctcggcaccaagccaagatgg
cagagccatctagcactcaccagaacaaagcctctttattgttactcata
tgtgtgtaggcgtgcatgaatatacaccacatgtatgtgtagctacctgc
agaggtcagaaagagcacagatctcctggagctgggtctggaaagtgacc
cataactgaggatgacactcaggagcccaggagaggccgcaccagcccct
agaacaaaccttctttttaagaaaattcttttaaatatcttgatgtaggc
cagaacatggtgtctgtcacagtctaggacagaaaaaggcaactattcca
gggtattactcaggcttaattaaaaactacactgatgtagatagagttga
gcgcaaaatatatattacaaggtgaaacagactgtacaccattcaggtca
tatttctgacaaacttgtgaatctagcaggtgagaatttattctgacaac
aacctagaatacaggaactttaggtcagttatcttggtggaaaagcaagc
agagggtaaaactggtaactttttatggaagctggggggtcctaaagaaa
acagaaatctgattttccaatttcttgcgtgagctaattgagatactgtg
ttatcaaccctgacttgtaagaagtacgagtgcatgagacatggtgaaat
ctaaatatttttcttttaatattcatttaaagatatg
gaattccaaaggtagttttgtctagagcagtagttctcaaccttcctaat
gctacaaccctttaatacagttcttcatgttgtggtgacccccaaccata
aaatgatttttattgctacttcacatgtgtaattttgctactgttatgaa
ttatctgtgtgttctgaatatctgtgtgttctgatggtctcaggccaccc
ctgtgaaatggtcattcaacccacaaagggatggagactcacaagttgag
aacttctggtctaaggttgatgcttgaaaaggtaccatttgtaagtgata
ctggaacttgtgctacacagcccaaggactactcttgtaagcaggaagtg
tttgcagtcttttacttacaaaggcatcaccaaaaacacaagttttattt
aaaaacaacaacaacataaaatattttcaattattctttgagaatttcat
aaagtatatttgatcatattcatccccctcctccacctcctcccagatcc
tcctccacttcctcgtccacccaatttcttgttctccctcactcttaaaa
actggatttaaaagtcatgacgttcagtttgtactaactactcctaagca
taggactgccctagagtgtggttaatataaatgttttcaccccagtgaaa
gaaactggccctccctctcccagcagccctcaatcaccaatagctccatg
actagggtgggcttctgtgcccacctgcactcctccatgctgaggtttca
tctgctttgagcctcccacatcttgctgcgctgggacagtctctgtgagt
ttacatggacatcttgccctgctgtgtctggaaaacactgcttccttaca
gtgatccacctgtggctctgacaatctttccagccttctcttccacataa
atcctgaacctcaaaagaggggttaataaaggcatcccatttaggtccac
acattcaaagtaatctctgcttattgaccagtgtagtttctgaaaataca
gcttctaacaacaggcagtgaatgacagaaatattttaaattcgctctct
ccaatcctttaccgtggagaaagggattgtgaataaaaaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_45869971_45871015
seq2: B6Ng01-155G15.b_48_1084 (reverse)

seq1  CATATCTTTAAAATGAATATTTAAAAAGAAAAAATATTTAGATTTCAACC  50
      ||||||||| |||||||||||  ||||| ||||||||||||||||| |||
seq2  CATATCTTT-AAATGAATATT--AAAAG-AAAAATATTTAGATTTC-ACC  45

seq1  ATGTCTCATGCACTTCGTACTTCCTTACAAGTCAGGGTTGATAACACAGT  100
      ||||||||||||| |||||||| |||||||||||||||||||||||||||
seq2  ATGTCTCATGCAC-TCGTACTT-CTTACAAGTCAGGGTTGATAACACAGT  93

seq1  ATCTCAATTAGCTCACCGCAAGAAATTGGAAAATCAGATTTCTGTTTTCT  150
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATCTCAATTAGCTCA-CGCAAGAAATTGGAAAATCAGATTTCTGTTTTCT  142

seq1  TTAGGACCCCCCAGCTTCCATAAAAAGTTACCAGTTTTACCCTCTGCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGACCCCCCAGCTTCCATAAAAAGTTACCAGTTTTACCCTCTGCTTG  192

seq1  CTTTTCCACCAAGATAACTGACCTAAAGTTCCTGTATTCTAGGTTGTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCACCAAGATAACTGACCTAAAGTTCCTGTATTCTAGGTTGTTGT  242

seq1  CAGAATAAATTCTCACCTGCTAGATTCACAAGTTTGTCAGAAATATGACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATAAATTCTCACCTGCTAGATTCACAAGTTTGTCAGAAATATGACC  292

seq1  TGAATGGTGTACAGTCTGTTTCACCTTGTAATATATATTTTGCGCTCAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGGTGTACAGTCTGTTTCACCTTGTAATATATATTTTGCGCTCAAC  342

seq1  TCTATCTACATCAGTGTAGTTTTTAATTAAGCCTGAGTAATACCCTGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTACATCAGTGTAGTTTTTAATTAAGCCTGAGTAATACCCTGGAA  392

seq1  TAGTTGCCTTTTTCTGTCCTAGACTGTGACAGACACCATGTTCTGGCCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGCCTTTTTCTGTCCTAGACTGTGACAGACACCATGTTCTGGCCTA  442

seq1  CATCAAGATATTTAAAAGAATTTTCTTAAAAAGAAGGTTTGTTCTAGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAGATATTTAAAAGAATTTTCTTAAAAAGAAGGTTTGTTCTAGGGG  492

seq1  CTGGTGCGGCCTCTCCTGGGCTCCTGAGTGTCATCCTCAGTTATGGGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGCGGCCTCTCCTGGGCTCCTGAGTGTCATCCTCAGTTATGGGTCA  542

seq1  CTTTCCAGACCCAGCTCCAGGAGATCTGTGCTCTTTCTGACCTCTGCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCAGACCCAGCTCCAGGAGATCTGTGCTCTTTCTGACCTCTGCAGG  592

seq1  TAGCTACACATACATGTGGTGTATATTCATGCACGCCTACACACATATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTACACATACATGTGGTGTATATTCATGCACGCCTACACACATATGA  642

seq1  GTAACAATAAAGAGGCTTTGTTCTGGTGAGTGCTAGATGGCTCTGCCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAATAAAGAGGCTTTGTTCTGGTGAGTGCTAGATGGCTCTGCCATC  692

seq1  TTGGCTTGGTGCCGAGCCTGACAACCTGAGTTTGATCCCCACATCCACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTTGGTGCCGAGCCTGACAACCTGAGTTTGATCCCCACATCCACAC  742

seq1  GGTGGGAAGAGAGTAAACTGTGCAGTGAGTGGTGTATGTGCTTAAGAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGAAGAGAGTAAACTGTGCAGTGAGTGGTGTATGTGCTTAAGAAAA  792

seq1  CACACATTAATAAGTCAATAAGTATTTGAAAACTTTTAAAGTCATCAGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATTAATAAGTCAATAAGTATTTGAAAACTTTTAAAGTCATCAGTC  842

seq1  TGCTGTGTAATGCTGTTGATGGTGTTAACTACACAGACTCTCCAAAAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGTAATGCTGTTGATGGTGTTAACTACACAGACTCTCCAAAAAAA  892

seq1  AAAGATTTTCTTTTTCATTTTTAACACCAAAAGGAAAAAAGGTCACCGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTTTCTTTTTCATTTTTAACACCAAAAGGAAAAAAGGTCACCGAT  942

seq1  TAAAATTCTATCCTCGGGTTAGTATGTCTCCCATTCAGAAACAAACATGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTCTATCCTCGGGTTAGTATGTCTCCCATTCAGAAACAAACATGT  992

seq1  GGTTAGCCCCTATCAATTTTTTAAAGTCCTTATTTTATGGAATTC  1045
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGCCCCTATCAATTTTTTAAAGTCCTTATTTTATGGAATTC  1037

seq1: chr14_45734715_45735814
seq2: B6Ng01-155G15.g_65_1157

seq1  GAATTCCAAAGGTAGTTTTGTCTAGAGCAGTAGTTCTCAACCTTCCTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGGTAGTTTTGTCTAGAGCAGTAGTTCTCAACCTTCCTAAT  50

seq1  GCTACAACCCTTTAATACAGTTCTTCATGTTGTGGTGACCCCCAACCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAACCCTTTAATACAGTTCTTCATGTTGTGGTGACCCCCAACCATA  100

seq1  AAATGATTTTTATTGCTACTTCACATGTGTAATTTTGCTACTGTTATGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATTTTTATTGCTACTTCACATGTGTAATTTTGCTACTGTTATGAA  150

seq1  TTATCTGTGTGTTCTGAATATCTGTGTGTTCTGATGGTCTCAGGCCACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGTGTGTTCTGAATATCTGTGTGTTCTGATGGTCTCAGGCCACCC  200

seq1  CTGTGAAATGGTCATTCAACCCACAAAGGGATGGAGACTCACAAGTTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAAATGGTCATTCAACCCACAAAGGGATGGAGACTCACAAGTTGAG  250

seq1  AACTTCTGGTCTAAGGTTGATGCTTGAAAAGGTACCATTTGTAAGTGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTGGTCTAAGGTTGATGCTTGAAAAGGTACCATTTGTAAGTGATA  300

seq1  CTGGAACTTGTGCTACACAGCCCAAGGACTACTCTTGTAAGCAGGAAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACTTGTGCTACACAGCCCAAGGACTACTCTTGTAAGCAGGAAGTG  350

seq1  TTTGCAGTCTTTTACTTACAAAGGCATCACCAAAAACACAAGTTTTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGTCTTTTACTTACAAAGGCATCACCAAAAACACAAGTTTTATTT  400

seq1  AAAAACAACAACAACATAAAATATTTTCAATTATTCTTTGAGAATTTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAACAACAACATAAAATATTTTCAATTATTCTTTGAGAATTTCAT  450

seq1  AAAGTATATTTGATCATATTCATCCCCCTCCTCCACCTCCTCCCAGATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATATTTGATCATATTCATCCCCCTCCTCCACCTCCTCCCAGATCC  500

seq1  TCCTCCACTTCCTCGTCCACCCAATTTCTTGTTCTCCCTCACTCTTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCACTTCCTCGTCCACCCAATTTCTTGTTCTCCCTCACTCTTAAAA  550

seq1  ACTGGATTTAAAAGTCATGACGTTCAGTTTGTACTAACTACTCCTAAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGATTTAAAAGTCATGACGTTCAGTTTGTACTAACTACTCCTAAGCA  600

seq1  TAGGACTGCCCTAGAGTGTGGTTAATATAAATGTTTTCACCCCAGTGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACTGCCCTAGAGTGTGGTTAATATAAATGTTTTCACCCCAGTGAAA  650

seq1  GAAACTGGCCCTCCCTCTCCCAGCAGCCCTCAATCACCAATAGCTCCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGGCCCTCCCTCTCCCAGCAGCCCTCAATCACCAATAGCTCCATG  700

seq1  ACTAGGGTGGGCTTCTGTGCCCACCTGCACTCCTCCATGCTGAGGTTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGGTGGGCTTCTGTGCCCACCTGCACTCCTCCATGCTGAGGTTTCA  750

seq1  TCTGCTTTGAGCCTCCCACATCTTGCTGCGCTGGGACAGTCTCTGTGAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTTGAGCCTCCCACATCTTGCTGCGCTGGGACAGTCTCTGTGAGT  800

seq1  TTACATGGACATCTTGCCCTGCTGTGTCTGGAAAACACTGCTTCCTTACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGGACATCTTGCCCTGCTGTGTCTGGAAAACACTGCTTCCTTACA  850

seq1  GTGATCCACCTGTGGCTCTGACAATCTTTCCAGCCTTCTCTTCCACATAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCCACCTGTGGCTCTGACAATCTTTCCAGCCTTCTCTTCCACATAA  900

seq1  ATCCCTGAACCTCAAAAGGAGGGGTTAATAAAGGCATCCCATTTAGGTCC  950
      || |||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AT-CCTGAACCTCAAAA-GAGGGGTTAATAAAGGCATCCCATTTAGGTCC  948

seq1  ACACATTCCAAAGTTATTCTCTGCTTATTGACCAGTTGTAGGTTTCTGAA  1000
      ||||||| ||||| || |||||||||||||||||| |||| |||||||||
seq2  ACACATT-CAAAG-TAATCTCTGCTTATTGACCAG-TGTA-GTTTCTGAA  994

seq1  AATACAGCTCTTAACCAACAGGCAGTGAGTGAACAGAAATTATTTTAAAT  1050
      |||||||||  ||| ||||||||||||| || ||||||| ||||||||||
seq2  AATACAGCTTCTAA-CAACAGGCAGTGAATG-ACAGAAA-TATTTTAAAT  1041

seq1  TCGCTTCTCCCAAATCTTTTACACGTGGAGAA--GGA-TGTG-ATAAAAA  1096
      |||| |||| | |||| ||||| |||||||||  ||| |||| |||||||
seq2  TCGC-TCTCTCCAATCCTTTAC-CGTGGAGAAAGGGATTGTGAATAAAAA  1089

seq1  AAAA  1100
      ||||
seq2  AAAA  1093