BAC Information

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BAC

Clone NameB6Ng01-155I22
Chromosome14 (Build37)
Map Location 77,955,801 - 78,140,326
singlet/doubletdoublet
Overlap geneD230005D02Rik
Upstream gene2810032E02Rik, LOC100043753, LOC100043201, 9030625A04Rik, Ccdc122, LOC100043755, LOC676171, EG629678
Downstream geneGm1587, Dnajc15, Epsti1, AU021034, Tnfsf11, LOC219180, Akap11, Dgkh
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155I22.bB6Ng01-155I22.g
ACCDH950307DH950308
length1,0711,073
definitionDH950307|Mus musculus domesticus DNA, BAC clone: B6Ng01-155I22, 5' end.DH950308|Mus musculus domesticus DNA, BAC clone: B6Ng01-155I22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,955,801 - 77,956,370)(78,139,257 - 78,140,326)
sequence
gaattctctggtagaatttttagggtcacttatatatactatcatatcat
ctgcaaaaagtgatattttgacttcctcttttccaatttgtatccccttg
atctccttttgttgtcgaattgctctggctaatacttcaagtactatgtt
gaaaaggtagggagaaagtgggcagccttgtctagtccctgattttagtg
ggattgcttccagcttctctccatttactttgatgttggctactggtttg
ctgtagattgcttttatcatgtttaggtatgggccttgaattcctgatct
ttccaaaacttttatcatgaatgggtgttggatcttgtcaaatgcttttt
ctgcatctaacgagatgatcatgtggtttttgtctttgagtttgtttata
taatggattacattgatggattttcgtatattaaaccatccctgcatccc
tggaataaaacctacttggtcaggatggatgattgctttaatgtgttctt
ggattcggttagcgagaattttattgaggatttttgcatcgatattcata
agagaaattggtctgaagttctctatctttgttggatctttctgtggttt
aggtatcagagtaatagtggcttcataaaatgagttgggtagagtacctt
ctacttctattttgtgaaatagtttgtgcagaattggaattagatcttct
ttgaaggtctgatagaactctgcactaaacccatctggtcctgggctttt
tttggttgggagactattaataactgcttctatttctttaggtgatatgg
gactgtttagatggtcaacttgatcctgattcaactttggtacctggtat
ctgtccagaaatttgtccattttcgtccaggttttccagttttgttgagt
atagccttttgtagaaggatctgatggtgtttggattcttcagatctgtt
gtttgtctccctttcatttctgattttgttaatagggccttctacttctt
actacataaaaccactactaccatttaatatctttggccaattcgtttaa
tgtgtatttaaatttttattc
gaattctacttagtattaaaagtagccattgcatcagttcaaaataagca
ctaactgttggatattcagcttacccaggttgcagatatgcctgtgagct
acaagaaacaggaacactcactcccaaggataaccaagccacaaagcatg
aagaacaacagggaactagagaagctggaaagcagaacagtaccaggaaa
agaggtctggtgatcggaaggtagaagggatagtttgtcccctgctgctt
tagcatcttagtagcagagccttctgtctgcctctctgattgcttggctg
acatatactctcctcccatctcatacctctgcatggtgcctggtcatagg
gatcctctcagtgtagataactctggtggttttctctgtgactttcaagc
aggctaagactggataggctgactatgtctagcagtggcctctcaccaat
ggctgagtcctagtgacatcaggctcagagtcctctcaatagtcagctcc
tcagattgggaccaaaaggaacaggcatttgagacttgctagaagtggtc
agaatccatgatttactctctttctgtcttttaaatatcaaattggagtt
gttaagtggaagccagaggttaacattaggcatcttcctcaatcagtctc
taccttatgtttttgagatagtctctcactgaatcttgaactcagcaatt
tgtcttgtgtgacagaaacccttctgtctccgtaccactgggattatagg
tatgtagtgcagtgctccacttttggtctgttggtgctaggcattgaact
caggtcttcagacttgcacagcaagcactttacctagcccagggaataag
agctctatgcttcaaacaaatatgtcatgactctgaaacacatgacagaa
aagggaaggggaccagatgggctagtgagagggcatgtcaacatggcact
cacccaattcctgggtgctggactcagctgtgattctttcagtgtcattg
actcattgagaagtcattagagaattgtgaaaagtaccaatattgttgcc
acactgagtggttttttgttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_77955801_77956370
seq2: B6Ng01-155I22.b_563_1118

seq1  GAATTTTATTGAGGATTTTTGCATCGATATTCATAAGAGAAATTGGTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTATTGAGGATTTTTGCATCGATATTCATAAGAGAAATTGGTCTG  50

seq1  AAGTTCTCTATCTTTGTTGGATCTTTCTGTGGTTTAGGTATCAGAGTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTCTATCTTTGTTGGATCTTTCTGTGGTTTAGGTATCAGAGTAAT  100

seq1  AGTGGCTTCATAAAATGAGTTGGGTAGAGTACCTTCTACTTCTATTTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTTCATAAAATGAGTTGGGTAGAGTACCTTCTACTTCTATTTTGT  150

seq1  GAAATAGTTTGTGCAGAATTGGAATTAGATCTTCTTTGAAGGTCTGATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGTTTGTGCAGAATTGGAATTAGATCTTCTTTGAAGGTCTGATAG  200

seq1  AACTCTGCACTAAACCCATCTGGTCCTGGGCTTTTTTTGGTTGGGAGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGCACTAAACCCATCTGGTCCTGGGCTTTTTTTGGTTGGGAGACT  250

seq1  ATTAATAACTGCTTCTATTTCTTTAGGTGATATGGGACTGTTTAGATGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATAACTGCTTCTATTTCTTTAGGTGATATGGGACTGTTTAGATGGT  300

seq1  CAACTTGATCCTGATTCAACTTTGGTACCTGGTATCTGTCCAGAAATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTGATCCTGATTCAACTTTGGTACCTGGTATCTGTCCAGAAATTTG  350

seq1  TCCA-TTTCGTCCAGGTTTTCCAGTTTTGTTGAGTATAGCCTTTTGTAGA  399
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTTCGTCCAGGTTTTCCAGTTTTGTTGAGTATAGCCTTTTGTAGA  400

seq1  AGGATCTGATGGTGTTTTGGATTTCTTCAGGATCTGTTGTTATGTCTCCC  449
      |||||||||||||| |||||| ||||||| ||||||||||| ||||||||
seq2  AGGATCTGATGGTG-TTTGGA-TTCTTCA-GATCTGTTGTT-TGTCTCCC  446

seq1  TTTTCATTTCTGATTTTGTTAATTAGGGCCTTCTACCTTCTTAAACATAC  499
       ||||||||||||||||||||| |||||||||||| |||||||    |||
seq2  -TTTCATTTCTGATTTTGTTAA-TAGGGCCTTCTA-CTTCTTA---CTAC  490

seq1  ATAAAACCACTACTACCATTTAATATCTTTGTGCACAAATTTCGTTTAAT  549
      ||||||||||||||||||||||||||||||| || |||  ||||||||||
seq2  ATAAAACCACTACTACCATTTAATATCTTTG-GC-CAA--TTCGTTTAAT  536

seq1  GTGTTATTTAATATTTTATTC  570
      ||| |||||||  ||||||||
seq2  GTG-TATTTAAATTTTTATTC  556

seq1: chr14_78139257_78140326
seq2: B6Ng01-155I22.g_65_1137 (reverse)

seq1  AAAAAC-AAAAACCACTCAGTGTGGC-ACATTATTTGGTACTTTTCAACA  48
      |||||| ||||||||||||||||||| ||| || |||||||||||||  |
seq2  AAAAACAAAAAACCACTCAGTGTGGCAACAATA-TTGGTACTTTTCACAA  49

seq1  ATCTCTAATGACTTCTCAATGAGTCAATGACACTGAAAGAATCACAGCTG  98
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAATGACTTCTCAATGAGTCAATGACACTGAAAGAATCACAGCTG  99

seq1  AGTCCAGCACCCAGGAATTGGGTGAGTGCCATGTTGACATGCCCTCTCAC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCAGCACCCAGGAATTGGGTGAGTGCCATGTTGACATGCCCTCTCAC  149

seq1  TAGCCCATCTGGT-CCCTTCCCTTTTCTGTCATGTGTTTCAGAGTCATGA  197
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TAGCCCATCTGGTCCCCTTCCCTTTTCTGTCATGTGTTTCAGAGTCATGA  199

seq1  CATATTTGTTTGAAGCATAGAGCTCTTATTCCCTGGGCTAGGTAAAGTGC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTGTTTGAAGCATAGAGCTCTTATTCCCTGGGCTAGGTAAAGTGC  249

seq1  TTGCTGTGCAAGTCTGAAGACCTGAGTTCAATGCCTAGCACCAACAGACC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTGCAAGTCTGAAGACCTGAGTTCAATGCCTAGCACCAACAGACC  299

seq1  AAAAGTGGAGCACTGCACTACATACCTATAATCCCAGTGGTACGGAGACA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGGAGCACTGCACTACATACCTATAATCCCAGTGGTACGGAGACA  349

seq1  GAAGGGTTTCTGTCACACAAGACAAATTGCTGAGTTCAAGATTCAGTGAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGTTTCTGTCACACAAGACAAATTGCTGAGTTCAAGATTCAGTGAG  399

seq1  AGACTATCTC-AAAACATAAGGTAGAGACTGATTGAGGAAGATGCCTAAT  446
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGACTATCTCAAAAACATAAGGTAGAGACTGATTGAGGAAGATGCCTAAT  449

seq1  GTTAACCTCTGGCTTCCACTTAACAACTCCAATTTGATATTTAAAAGACA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACCTCTGGCTTCCACTTAACAACTCCAATTTGATATTTAAAAGACA  499

seq1  GAAAGAGAGTAAATCATGGATTCTGACCACTTCTAGCAAGTCTCAAATGC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGAGTAAATCATGGATTCTGACCACTTCTAGCAAGTCTCAAATGC  549

seq1  CTGTTCCTTTTGGTCCCAATCTGAGGAGCTGACTATTGAGAGGACTCTGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCTTTTGGTCCCAATCTGAGGAGCTGACTATTGAGAGGACTCTGA  599

seq1  GCCTGATGTCACTAGGACTCAGCCATTGGTGAGAGGCCACTGCTAGACAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGATGTCACTAGGACTCAGCCATTGGTGAGAGGCCACTGCTAGACAT  649

seq1  AGTCAGCCTATCCAGTCTTAGCCTGCTTGAAAGTCACAGAGAAAACCACC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGCCTATCCAGTCTTAGCCTGCTTGAAAGTCACAGAGAAAACCACC  699

seq1  AGAGTTATCTACACTGAGAGGATCCCTATGACCAGGCACCATGCAGAGGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTATCTACACTGAGAGGATCCCTATGACCAGGCACCATGCAGAGGT  749

seq1  ATGAGATGGGAGGAGAGTATATGTCAGCCAAGCAATCAGAGAGGCAGACA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATGGGAGGAGAGTATATGTCAGCCAAGCAATCAGAGAGGCAGACA  799

seq1  GAAGGCTCTGCTACTAAGATGCTAAAGCAGCAGGGGACAAACTATCCCTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTCTGCTACTAAGATGCTAAAGCAGCAGGGGACAAACTATCCCTT  849

seq1  CTACCTTCCGATCACCAGACCTCTTTTCCTGGTACTGTTCTGCTTTCCAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTTCCGATCACCAGACCTCTTTTCCTGGTACTGTTCTGCTTTCCAG  899

seq1  CTTCTCTAGTTCCCTGTTGTTCTTCATGCTTTGTGGCTTGGTTATCCTTG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTAGTTCCCTGTTGTTCTTCATGCTTTGTGGCTTGGTTATCCTTG  949

seq1  GGAGTGAGTGTTCCTGTTTCTTGTAGCTCACAGGCATATCTGCAACCTGG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGAGTGTTCCTGTTTCTTGTAGCTCACAGGCATATCTGCAACCTGG  999

seq1  GTAAGCTGAATATCCAACAGTTAGTGCTTATTTTGAACTGATGCAATGGC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCTGAATATCCAACAGTTAGTGCTTATTTTGAACTGATGCAATGGC  1049

seq1  TACTTTTAATACTAAGTAGAATTC  1070
      ||||||||||||||||||||||||
seq2  TACTTTTAATACTAAGTAGAATTC  1073