BAC Information

Click to search

BAC

Clone NameB6Ng01-156C22
Chromosome14 (Build37)
Map Location 4,758,249 - 4,881,457
singlet/doubletdoublet
Overlap geneLOC100041262, LOC665981, LOC100041283, LOC100040996, LOC673676
Upstream geneLOC100040880, LOC100040615, LOC100040923, LOC100040621, LOC100040641, LOC100040652, LOC100040935, LOC100040852, LOC100040674, LOC100040906, LOC100040688, LOC100040701, LOC100040897, LOC100041012, LOC100041019, ENSMUSG00000068790, LOC100041054, LOC666442, LOC100040793, LOC100041076, LOC100040801, LOC666336, LOC100041100, LOC100040808, LOC100041119, 2610042L04Rik, LOC100041139, LOC100041151, LOC100041177, LOC100041162, LOC100040889, LOC100040900, LOC100040917, LOC100040928, EG666560, LOC666555, EG666549
Downstream geneLOC100041007, LOC100041317, LOC100041306, LOC100041024, LOC100041336, EG666815, LOC666808, EG666800, LOC100041374, 4930555G01Rik, EG666772, LOC666765, LOC100041401, LOC100041105, EG666750, LOC666743, LOC100041447, LOC673138, LOC666740, LOC641258, LOC673685, LOC100041158, LOC100041501, LOC100041515, LOC100041184, EG666706, LOC100041195, LOC100041545, LOC100041565, LOC100041215
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156C22.bB6Ng01-156C22.g
ACCDH950754DH950755
length1,0881,082
definitionDH950754|Mus musculus domesticus DNA, BAC clone: B6Ng01-156C22, 5' end.DH950755|Mus musculus domesticus DNA, BAC clone: B6Ng01-156C22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(4,758,249 - 4,759,365)(4,880,370 - 4,881,457)
sequence
gaattcaccatgacctcctcattctgggtaattctccctgaaatgtggat
tatatagtttggccaaattcataggactaggccaaagatcaagagccctt
gttctgaaagaaaaaaaaaaggagaaatgtcctcatagtttctgtatacc
cacacctgtgccataaactactgagagtttagagacctcgtctgtccctc
caggcctatgtgggagctcaaacaaccagaaatctaaccacctggacacc
cagcctctggagacctttggacaagatagtaagattaataagcttagatg
atcctagtacataggaggtagaaggtaacatactgtgagcttggatagtt
cagaatccatcctggattcaggtgacccttgaagcctgtgttcttgggac
tctttgctcttggggccaggcccaaccacagatcaaatccttactatgaa
aaattgaaagtggagattaagcaggtaatgttggacctgcagagcttaca
gaatgtgtacactgaggcctcagagacatttgaattcctggcaaagagaa
aggctgctataggtaactgtctgtcttgcttgggagcacatgagctgtag
aattgccatctctgcttttgatcctgcacaggagactctcgagctctggt
tcttgctttctgccacttcacacaggagcctttagatttttctgttgtaa
acctgtgggttgaaacactttttggggtaaaaaaaaaaaaaggtcaaagg
accctttcacagaggttgtgtatcagacaatcctttatctcagacacttc
tattatggcttataacagtacaaaaattatagtacccaagtagcaatgaa
ataatcttaagtttgggaggtcactgcattaaagcatccacagcatttgg
taaattgagaaaccctggtcttgacagagaactattgtatcatgtgagtc
ttctgaccccggggctgagtcagatctgtagagagctagtatcagcagac
catatatagcagatccctgtttctcttccatcatagtgcttgccatctcg
gatgttctccatagatgacagataggacaactgaagtc
gaattcagtgttcatcctgtgttagggcatgacccaagaagcaaataatc
tgctgaattaaggattcaataatcatgtgccaacaggttatgtcatggac
taccaagccgagtgcatgccacatcctggctcattcacactgggtcccct
tggtgctaattaaacttactatcctgggtagaggacagcagaaccagggg
accaaatggagctagctgaccttcaagggcttcccggacaagcatgaagg
aatagacttcttttatgacaattttccactacactgtgccacaggcatgg
gtccattagatatctgtaatgactttcctcttgtttttaaggcagggatt
atcattccttggttcctgttgttatttgaattcccagaggacacaactag
tatttacaggagaaaggctttatcacacctcctcccccagaagattcctg
tgtgacaccaaggaaacaccaggagcaaacttccctggtgatcactttgg
acctctatggactcaacactctcaggacctgcaaactgtgcttcacacaa
atcctcagaccccatcaaaggtcccagagccccagtcctgaacaaaacac
acacacatctacattcacacacacagacacaattagaatgccaaataaat
cctgtgaggtgccatctctcagattataataaacaatatcagagtaaagc
cgtgatagcctgcaggcattgcattcacacactgagagacagtaagtgtg
agcaggtccttccagctgtttagagcaacaatcagattgcaagcacccca
aggtcaagtaaaaaagaagatgataataaacacacagcaccttgtttatc
caacaattaaacacctttcaggctacttaattgaatgatgagagatgaca
aactccattcattgaaggaaattggggtaacagatggcagaatacagtca
tagggtactggtcataatttcctacctgtagtttaaatcctcatacatgt
aacattcaggatttcaaacatttccttcctctcaatggctgatttcttta
tggcaatacagtcttctactttaatatatttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_4758249_4759365
seq2: B6Ng01-156C22.b_38_1125

seq1  GAATTCACCATGACCTCCTCATTCTGGGTAATTCTCCCTGAAATGTGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCATGACCTCCTCATTCTGGGTAATTCTCCCTGAAATGTGGAT  50

seq1  TATATAGTTTGGCCAAATTCATAGGACTAGGCCAAAGATCAAGAGCCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGTTTGGCCAAATTCATAGGACTAGGCCAAAGATCAAGAGCCCTT  100

seq1  GTTCTGAAAGAAAAAAAAAAGGAGAAATGTCCTCATAGTTTCTGTATACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAAAGAAAAAAAAAAGGAGAAATGTCCTCATAGTTTCTGTATACC  150

seq1  CACACCTGTGCCATAAACTACTGAGAGTTTAGAGACCTCGTCTGTCCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCTGTGCCATAAACTACTGAGAGTTTAGAGACCTCGTCTGTCCCTC  200

seq1  CAGGCCTATGTGGGAGCTCAAACAACCAGAAATCTAACCACCTGGACACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCTATGTGGGAGCTCAAACAACCAGAAATCTAACCACCTGGACACC  250

seq1  CAGCCTCTGGAGACCTTTGGACAAGATAGTAAGATTAATAAGCTTAGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCTGGAGACCTTTGGACAAGATAGTAAGATTAATAAGCTTAGATG  300

seq1  ATCCTAGTACATAGGAGGTAGAAGGTAACATACTGTGAGCTTGGATAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTAGTACATAGGAGGTAGAAGGTAACATACTGTGAGCTTGGATAGTT  350

seq1  CAGAATCCATCCTGGATTCAGGTGACCCTTGAAGCCTGTGTTCTTGGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATCCATCCTGGATTCAGGTGACCCTTGAAGCCTGTGTTCTTGGGAC  400

seq1  TCTTTGCTCTTGGGGCCAGGCCCAACCACAGATCAAATCCTTACTATGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCTCTTGGGGCCAGGCCCAACCACAGATCAAATCCTTACTATGAA  450

seq1  AAATTGAAAGTGGAGATTAAGCAGGTAATGTTGGACCTGCAGAGCTTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGAAAGTGGAGATTAAGCAGGTAATGTTGGACCTGCAGAGCTTACA  500

seq1  GAATGTGTACACTGAGGCCTCAGAGACATTTGAATTCCTGGCAAAGAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTGTACACTGAGGCCTCAGAGACATTTGAATTCCTGGCAAAGAGAA  550

seq1  AGGCTGCTATAGGTAACTGTCTGTCTTGCTTGGGAGCACATGAGCTGTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGCTATAGGTAACTGTCTGTCTTGCTTGGGAGCACATGAGCTGTAG  600

seq1  AATTGCCATCTCTGCTTTTGATCCTGCACAGGAGACTCTCGAGCTCTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCCATCTCTGCTTTTGATCCTGCACAGGAGACTCTCGAGCTCTGGT  650

seq1  TCTTGCTTTCTGCCACTTCACACAGGAGCCTTTAGATTTTTCTGTTGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTTTCTGCCACTTCACACAGGAGCCTTTAGATTTTTCTGTTGTAA  700

seq1  ACCTGTGGGTTGAAACACTTTTTGGGGT-AAAAAAAAAAAAGGTCAAAGG  749
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ACCTGTGGGTTGAAACACTTTTTGGGGTAAAAAAAAAAAAAGGTCAAAGG  750

seq1  ACCCTTTCACAGAGGTTGTGTATCAGACAATCCTTTATCTCAGACACTTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTCACAGAGGTTGTGTATCAGACAATCCTTTATCTCAGACACTTC  800

seq1  TATTATGGCTTATAACAGTACAAAAATTATAGTACCCAAGTAGCAATGAA  849
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TATTATGGCTTATAACAGTACAAAAATTATAGTACCCAAGTAGCAATG-A  849

seq1  AATAATCTTAAGTTTGGGAGGTCACTGCATTAAAGCATCCACAGCATTTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCTTAAGTTTGGGAGGTCACTGCATTAAAGCATCCACAGCATTTG  899

seq1  GTAAATTGAGAAACCCTGGTCTTGACAGAAGAACTATTTGTATCATGTGA  949
      |||||||||||||||||||||||||||| ||||||| |||||||||||||
seq2  GTAAATTGAGAAACCCTGGTCTTGACAG-AGAACTA-TTGTATCATGTGA  947

seq1  GGTCTTCTTGACCCCCGGGGCTGAGTCAGGATCTGTAGAGAGCTAGTTAT  999
       |||||| ||| |||||||||||||||| ||||||||||||||||| |||
seq2  -GTCTTC-TGA-CCCCGGGGCTGAGTCA-GATCTGTAGAGAGCTAG-TAT  992

seq1  CAGCAGACCCATATATAGCAAGTATTCCCCTTGTTTCTCCTTTCCAATTC  1049
      ||||||| ||||||||||||  |     || ||||||||  |||||  ||
seq2  CAGCAGA-CCATATATAGCAGAT-----CCCTGTTTCTC--TTCCA--TC  1032

seq1  ATAGTGCCTTTGCCCATTCCTTCGTGATGTTTCTCCATTAGGATGGACAG  1099
      |||||||  ||| ||||    ||| |||| ||||||||   ||| |||||
seq2  ATAGTGC--TTG-CCAT---CTCG-GATG-TTCTCCAT--AGAT-GACAG  1071

seq1  ATAGGGACAACTGTAGTC  1117
      ||| ||||||||| ||||
seq2  ATA-GGACAACTGAAGTC  1088

seq1: chr14_4880370_4881457
seq2: B6Ng01-156C22.g_68_1149 (reverse)

seq1  CAAATATAAATAAAGTAGAAGAACTGAAATTGCATATAAGGAAGATCAG-  49
      ||||||| | ||||||||||| ||||  |||||  |||| ||| ||||| 
seq2  CAAATAT-ATTAAAGTAGAAG-ACTG-TATTGC-CATAAAGAA-ATCAGC  45

seq1  CAATGAGAGGAAGGAAATGTGTGAAATCCTGAATGTTTACATGTATGAGG  99
      || ||||||||||||||||| |||||||||||||| ||||||||||||||
seq2  CATTGAGAGGAAGGAAATGTTTGAAATCCTGAATG-TTACATGTATGAGG  94

seq1  ATTTAAACTACAGGTAGG-AATTATGACCAGTACCCTATTGACTGTATTC  148
      |||||||||||||||||| ||||||||||||||||||| |||||||||||
seq2  ATTTAAACTACAGGTAGGAAATTATGACCAGTACCCTA-TGACTGTATTC  143

seq1  TGCCATCTGTTACCCCAATTTCCTTCAATGAATGGAGTTTGTCATCTCTC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATCTGTTACCCCAATTTCCTTCAATGAATGGAGTTTGTCATCTCTC  193

seq1  ATCATTCAATTAAGTAGCCCTGAAAGGTGTTTAATTGTTGGATAAACAAG  248
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATCATTCAATTAAGTAG-CCTGAAAGGTGTTTAATTGTTGGATAAACAAG  242

seq1  GTGCTGTGTGTTTATTATCATCTTCTTTTTTACTTGACCTTGGGGTGCTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTGTGTTTATTATCATCTTCTTTTTTACTTGACCTTGGGGTGCTT  292

seq1  GCAATCTGATTGTTGCTCTAAACAGCTGGAAGGACCTGCTCACACTTACT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCTGATTGTTGCTCTAAACAGCTGGAAGGACCTGCTCACACTTACT  342

seq1  GTCTCTCAGTGTGTGAATGCAATGCCTGCAGGCTATCACGGCTTTACTCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTCAGTGTGTGAATGCAATGCCTGCAGGCTATCACGGCTTTACTCT  392

seq1  GATATTGTTTATTATAATCTGAGAGATGGCACCTCACAGGATTTATTTGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTGTTTATTATAATCTGAGAGATGGCACCTCACAGGATTTATTTGG  442

seq1  CATTCTAATTGTGTCTGTGTGTGTGAATGTAGATGTGTGTGTGTTTTGTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTAATTGTGTCTGTGTGTGTGAATGTAGATGTGTGTGTGTTTTGTT  492

seq1  CAGGACTGGGGCTCTGGGACCTTTGATGGGGTCTGAGGATTTGTGTGAAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACTGGGGCTCTGGGACCTTTGATGGGGTCTGAGGATTTGTGTGAAG  542

seq1  CACAGTTTGCAGGTCCTGAGAGTGTTGAGTCCATAGAGGTCCAAAGTGAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTTGCAGGTCCTGAGAGTGTTGAGTCCATAGAGGTCCAAAGTGAT  592

seq1  CACCAGGGAAGTTTGCTCCTGGTGTTTCCTTGGTGTCACACAGGAATCTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGGGAAGTTTGCTCCTGGTGTTTCCTTGGTGTCACACAGGAATCTT  642

seq1  CTGGGGGAGGAGGTGTGATAAAGCCTTTCTCCTGTAAATACTAGTTGTGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGGAGGAGGTGTGATAAAGCCTTTCTCCTGTAAATACTAGTTGTGT  692

seq1  CCTCTGGGAATTCAAATAACAACAGGAACCAAGGAATGATAATCCCTGCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGGAATTCAAATAACAACAGGAACCAAGGAATGATAATCCCTGCC  742

seq1  TTAAAAACAAGAGGAAAGTCATTACAGATATCTAATGGACCCATGCCTGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAACAAGAGGAAAGTCATTACAGATATCTAATGGACCCATGCCTGT  792

seq1  GGCACAGTGTAGTGGAAAATTGTCATAAAAGAAGTCTATTCCTTCATGCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAGTGTAGTGGAAAATTGTCATAAAAGAAGTCTATTCCTTCATGCT  842

seq1  TGTCCGGGAAGCCCTTGAAGGTCAGCTAGCTCCATTTGGTCCCCTGGTTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCGGGAAGCCCTTGAAGGTCAGCTAGCTCCATTTGGTCCCCTGGTTC  892

seq1  TGCTGTCCTCTACCCAGGATAGTAAGTTTAATTAGCACCAAGGGGACCCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCCTCTACCCAGGATAGTAAGTTTAATTAGCACCAAGGGGACCCA  942

seq1  GTGTGAATGAGCCAGGATGTGGCATGCACTCGGCTTGGTAGTCCATGACA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAATGAGCCAGGATGTGGCATGCACTCGGCTTGGTAGTCCATGACA  992

seq1  TAACCTGTTGGCACATGATTATTGAATCCTTAATTCAGCAGATTATTTGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTGTTGGCACATGATTATTGAATCCTTAATTCAGCAGATTATTTGC  1042

seq1  TTCTTGGGTCATGCCCTAACACAGGATGAACACTGAATTC  1088
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGGTCATGCCCTAACACAGGATGAACACTGAATTC  1082