BAC Information

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BAC

Clone NameB6Ng01-157A03
Chromosome14 (Build37)
Map Location 76,891,808 - 77,001,903
singlet/doubletdoublet
Overlap geneTsc22d1, 2810032E02Rik
Upstream geneGm912, Spert, 4930564B18Rik, Cog3, Slc25a30, LOC100043189, Tpt1, LOC100038852, Gtf2f2, LOC668504, Kctd4, 1200011I18Rik, Nufip1, LOC100043752, 2900040C04Rik
Downstream geneLOC100043753, LOC100043201, 9030625A04Rik, Ccdc122, D230005D02Rik, LOC100043755, LOC676171, EG629678
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157A03.bB6Ng01-157A03.g
ACCDH951356DH951357
length1,118568
definitionDH951356|Mus musculus domesticus DNA, BAC clone: B6Ng01-157A03, 5' end.DH951357|Mus musculus domesticus DNA, BAC clone: B6Ng01-157A03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,000,768 - 77,001,903)(76,891,808 - 76,892,157)
sequence
gaattcagcttgtctcattaggggccccatatgcctactaatccagaaat
tcttgacctgtcattggcagaactcccagagaaatgattagaattattgg
tccacaatcagccacagctgaccagcagtattggctctctcagcttttcc
tctagtgcccatcactcctttcgaggagacagtgcctggttatgtaagcc
tcactcctgtgacttggcatccagtctagtgtcgcccagttggaacaggt
tacatgcagctcaccaatcctttcagactcggcccagcaaagtttcagac
ctgtctgcacctgcacataggccactgctatttgcccacaactctgccca
tgtttcaacagaaactggatcttcctctcgacctcccctagtcctagtgt
acctcactatacagccaagaggccagagttttaatcacaaagatggtggc
tcctcaacagggagatgtctgaaaccatcccagtggggcagggggtaccc
aattaggaggaaaagtggccgtagtctcaaggaacatcggaatagtagag
tccacaatgcaacacacacagaggaaatccttagggatgctcttggctgc
tagcataacaacacgctctaccctcagagatgccctggtcacaggggacc
aagccagggtcagaccaaggggtgacattggaggtgggaaggcatcagga
acaggacagcaatgaaactagaagcccctgtcgctcttaaccatgggaaa
tgagaacttagaaggagagtcaccatgggcgcttagaacattgcttagaa
cattgcattctgacttcagagccccagcacttaaccctttcttgtcctcc
tatccttgaaggagtgagtggtttctgttacacttaattcacccattgct
acaggggctactctgaaagtgctttctttactgacacatttagaagaaat
tgtgaagtgttaatggattttaatagtggttgtgttttctctaacgcagg
ctagctccaataactggagagggctatattcattatcagcttaaggccag
caactggacggaataccttttcagtcctctatgtaactggcttatcctcc
agccaaatcccagagact
gaattctctggctgttttcttatctgtctcacctgtagctgaaggctctg
gaagccagggggcctgaaactactcagccaccttagcctggaagaaatcg
tgatctgccaaattctggtctttatggagaaaattatttctctgattatg
gaagagggctatttctgattgatttcttattcactgccatctacatgtca
gtcaccttaacagtctttccagttgttctgtttttcagtcattgtcccaa
atgacaatgcagcacttgcttacaacagtctccaccccgcccccaccccc
acccccgtgtctgtctgtctgtctctctcggggtggggggtggggggtgt
tgtcacactcatggttctgccaatgcataggaaaggaccgtggagcaaga
ctccatggagttctgttggatacattcttagtaagatgtttgcaaaaaaa
aaattttgaaaagtacgactttataagtgtatgaagatggtttaaatgaa
gtctttgaatactgaaagagatggagttccagttgatcttgtctttttca
ctgttacatcagaaagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_77000768_77001903
seq2: B6Ng01-157A03.b_46_1163 (reverse)

seq1  AGTCTCTTGGGGATTTGGGCTGGGAGGT-AGCCAGGTTAGCATAGAGGAC  49
      |||||||  ||||||| ||||||  | | ||||| |||| ||||||||||
seq2  AGTCTCT--GGGATTT-GGCTGGAGGATAAGCCA-GTTA-CATAGAGGAC  45

seq1  TGAAATAGTGATACTGCTCAGTTGTTGTGCCCTTAAAGCTTGATAAATGA  99
      ||||| ||  || | |  |||||| || |||  | |||| |||| |||||
seq2  TGAAA-AGGTATTCCGTCCAGTTGCTG-GCC--TTAAGC-TGAT-AATGA  89

seq1  ATATAGCCCCTTCTCAGTTATTTGGGAGCTAG-CTGCGTTAAGAGGAAAA  148
      |||||||||  || ||||||||  |||||||| ||||||| ||| |||||
seq2  ATATAGCCCTCTC-CAGTTATT--GGAGCTAGCCTGCGTT-AGA-GAAAA  134

seq1  CACAAACACTTATTAAAAATCCATTAACACTTCACAATTTCTTCTAAATG  198
      ||||| ||| |||| |||||||||||||||||||||||||||||||||||
seq2  CACAACCAC-TATT-AAAATCCATTAACACTTCACAATTTCTTCTAAATG  182

seq1  TTGTCAGTAAAGAAAGCACTTTCAGAGTAGCCCCTTGTAGCAATGGGTGA  248
       ||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  -TGTCAGTAAAGAAAGCACTTTCAGAGTAGCCCC-TGTAGCAATGGGTGA  230

seq1  ATTAAGTGTAACAGAAACCACTCACTCCTTCAAGGATAGGAGGACAAGAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTGTAACAGAAACCACTCACTCCTTCAAGGATAGGAGGACAAGAA  280

seq1  AGGGTTAAGTGCTGGGGCTCTGAAGTCAGAATGCAATGTTCTAAGCAATG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTAAGTGCTGGGGCTCTGAAGTCAGAATGCAATGTTCTAAGCAATG  330

seq1  TTCTAAGCGCCCATGGTGACTCTCCTTCTAAGTTCTCATTTCCCATGGTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGCGCCCATGGTGACTCTCCTTCTAAGTTCTCATTTCCCATGGTT  380

seq1  AAGAGCGACAGGGGCTTCTAGTTTCATTGCTGTCCTGTTCCTGATGCCTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCGACAGGGGCTTCTAGTTTCATTGCTGTCCTGTTCCTGATGCCTT  430

seq1  CCCACCTCCAATGTCACCCCTTGGTCTGACCCTGGCTTGGTCCCCTGTGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTCCAATGTCACCCCTTGGTCTGACCCTGGCTTGGTCCCCTGTGA  480

seq1  CCAGGGCATCTCTGAGGGTAGAGCGTGTTGTTATGCTAGCAGCCAAGAGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGCATCTCTGAGGGTAGAGCGTGTTGTTATGCTAGCAGCCAAGAGC  530

seq1  ATCCCTAAGGATTTCCTCTGTGTGTGTTGCATTGTGGACTCTACTATTCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTAAGGATTTCCTCTGTGTGTGTTGCATTGTGGACTCTACTATTCC  580

seq1  GATGTTCCTTGAGACTACGGCCACTTTTCCTCCTAATTGGGTACCCCCTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTCCTTGAGACTACGGCCACTTTTCCTCCTAATTGGGTACCCCCTG  630

seq1  CCCCACTGGGATGGTTTCAGACATCTCCCTGTTGAGGAGCCACCATCTTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACTGGGATGGTTTCAGACATCTCCCTGTTGAGGAGCCACCATCTTT  680

seq1  GTGATTAAAACTCTGGCCTCTTGGCTGTATAGTGAGGTACACTAGGACTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTAAAACTCTGGCCTCTTGGCTGTATAGTGAGGTACACTAGGACTA  730

seq1  GGGGAGGTCGAGAGGAAGATCCAGTTTCTGTTGAAACATGGGCAGAGTTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGTCGAGAGGAAGATCCAGTTTCTGTTGAAACATGGGCAGAGTTG  780

seq1  TGGGCAAATAGCAGTGGCCTATGTGCAGGTGCAGACAGGTCTGAAACTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAAATAGCAGTGGCCTATGTGCAGGTGCAGACAGGTCTGAAACTTT  830

seq1  GCTGGGCCGAGTCTGAAAGGATTGGTGAGCTGCATGTAACCTGTTCCAAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGCCGAGTCTGAAAGGATTGGTGAGCTGCATGTAACCTGTTCCAAC  880

seq1  TGGGCGACACTAGACTGGATGCCAAGTCACAGGAGTGAGGCTTACATAAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCGACACTAGACTGGATGCCAAGTCACAGGAGTGAGGCTTACATAAC  930

seq1  CAGGCACTGTCTCCTCGAAAGGAGTGATGGGCACTAGAGGAAAAGCTGAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCACTGTCTCCTCGAAAGGAGTGATGGGCACTAGAGGAAAAGCTGAG  980

seq1  AGAGCCAATACTGCTGGTCAGCTGTGGCTGATTGTGGACCAATAATTCTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCAATACTGCTGGTCAGCTGTGGCTGATTGTGGACCAATAATTCTA  1030

seq1  ATCATTTCTCTGGGAGTTCTGCCAATGACAGGTCAAGAATTTCTGGATTA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTCTCTGGGAGTTCTGCCAATGACAGGTCAAGAATTTCTGGATTA  1080

seq1  GTAGGCATATGGGGCCCCTAATGAGACAAGCTGAATTC  1136
      ||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCATATGGGGCCCCTAATGAGACAAGCTGAATTC  1118

seq1: chr14_76891808_76892157
seq2: B6Ng01-157A03.g_65_414

seq1  GAATTCTCTGGCTGTTTTCTTATCTGTCTCACCTGTAGCTGAAGGCTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGGCTGTTTTCTTATCTGTCTCACCTGTAGCTGAAGGCTCTG  50

seq1  GAAGCCAGGGGGCCTGAAACTACTCAGCCACCTTAGCCTGGAAGAAATCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCAGGGGGCCTGAAACTACTCAGCCACCTTAGCCTGGAAGAAATCG  100

seq1  TGATCTGCCAAATTCTGGTCTTTATGGAGAAAATTATTTCTCTGATTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGCCAAATTCTGGTCTTTATGGAGAAAATTATTTCTCTGATTATG  150

seq1  GAAGAGGGCTATTTCTGATTGATTTCTTATTCACTGCCATCTACATGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGGCTATTTCTGATTGATTTCTTATTCACTGCCATCTACATGTCA  200

seq1  GTCACCTTAACAGTCTTTCCAGTTGTTCTGTTTTTCAGTCATTGTCCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTTAACAGTCTTTCCAGTTGTTCTGTTTTTCAGTCATTGTCCCAA  250

seq1  ATGACAATGCAGCACTTGCTTACAACAGTCTCCACCCCGCCCCCACCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAATGCAGCACTTGCTTACAACAGTCTCCACCCCGCCCCCACCCCC  300

seq1  ACCCCCGTGTCTGTCTGTCTGTCTCTCTCGGGGTGGGGGGTGGGGGGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCGTGTCTGTCTGTCTGTCTCTCTCGGGGTGGGGGGTGGGGGGTGT  350