BAC Information

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BAC

Clone NameB6Ng01-157A20
Chromosome14 (Build37)
Map Location 121,535,210 - 121,536,362
singlet/doubletsinglet
Overlap geneFarp1
Upstream geneLOC100043831, Mbnl2, Rap2a, LOC668835, LOC668837, Ranbp5
Downstream geneLOC100043837, Stk24, Slc15a1, LOC100043577, Dock9, LOC668843, Phgdhl1, Gpr18, Ebi2, Timm8a2, Tm9sf2, LOC621710
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-157A20.bB6Ng01-157A20.g
ACCDH951390DH951391
length1,2331,134
definitionDH951390|Mus musculus domesticus DNA, BAC clone: B6Ng01-157A20, 5' end.DH951391|Mus musculus domesticus DNA, BAC clone: B6Ng01-157A20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagcatagcgacgcactattggcttattcaaacattaacagaaag
aacacagtgcatcaggactttgttcctgtgggctgggggcttatctttgt
tcacttaacaaccagttgatgtatatgactttactcggcgccaaggggta
acagaaaggaggttccggccagatggtgtgaacttagataatgtagcccc
atttgtccttgaataccttttcatctttacggccaagatattctttggaa
tgccttatcaacagccatgccttggcctgcctgggggcttgttctgcttt
gttctcagtcccagatggggcagtgggctcttaaacaactcacaagttac
aatattttatcttccttcaataggagccagaggaagaatttcaattactt
taaaaatattttactgattattattgggagggtacaggtgtgtggtgcat
ggagtcctgtctctccttctgcctttcttctggttcagggatcaggattt
gctgcgaggctcacacaacaagcacctttacctgctggccccaaatgtga
agattttggatatttgtttcttaacattgaaagtgccctgtctgtctgtc
tgtctgtttctctgtctgtctgtctctctctctgaatttttgtggtactg
gggatttaattcttggtctggagcatgctaggcaagtattctaccactga
gccgagtcacccagccttctcacacacagaattttaaatattctagaaac
tatatcaagaacataaagaggagcaagcaaaattaattttagtaatactt
tgataatttcctgtatcagcttataataacagttatctagtaggatattt
tacattgttttccttggtattaaacctttgaagtcggtatggtgcattag
ccatccttgtcaattcaaacctagattcaagtagacactcacagcctttt
gttctgagtggaccctctacacatcagatgattagtgcaggttctgttgt
cttttgcaacatggctatggctttgcaccttcccttggttcagcagcaag
gacaaaggctcaaccaatgcttctgctcccagtgagcctaatggaacggc
tcctagagtacacttctgtctggagtgtttcagggcgctctgcttattcg
aatggccttgaatctttagagaacagtcattatctcaaggcaactcatgc
tatagatgagccacaggtatggcctgtacttag
gaattccttattgcatgcctgtatcactcactcggagaggatttgatccc
tgagggtcctgccctttgtcgtgtttgtggcttagccctatgacaggaac
acgcatgtactattaaatagcatttacttttataaaaagtgtctgagtct
catctacagttaatatgtggagtgtgtaaattcatatgtatttgagtcgc
aagacgagaaggatgtctacgtttatcttacagaccgtgctgagttttgt
tcttggtgcatgaacttggatggatggctgctaggaaactatccttactt
gcttttctctcgacgaggagatagaggctgacaggggagtgccctgctca
cgaccaccttgctcaggattctgcaagtccagactaccacaccctcagtg
tgactccattcggggagtagggatggctttatctaagtcaatggaaaagt
cagataactacagaaagatctgacacctcacagtttcataaagcccgtgg
tagaccatggtgacttgtgatagtaaaatggtgaatgcatgcatgatgtt
aatagtacatgcaacggcagagtaattacttatgaatctagactctagtg
acctttagcgcttgaacctctaaaaatagttatttggtctgtctaacttt
cctgacttctcagtctgagagtcccacagctgaaagaaaattggagcatg
tgacatcgctcagtaatttaacacttcaggacaatccttgatgctcatct
agacttagtaggctccagagaatgttgttgttgttgctatttttctttaa
tctgagaaaggaagtcacatgacctttcttatgttacttgaaggtatatc
cccaagacaagctgatggtagccgtgtatgagaggtgcgtgcttgaactc
ctggtacagcaggaggtgcagctggcttgatgtgctctttggaagctcta
gccacctgtgcttagtctctaaggatcggggaccttctcatcgtacctat
cactcatagcttgtgctgtggggatcctggtgatcagtataactgtagaa
agatctaaacgtcaaggtctccagctgatatttagaagaacgcattcaaa
taaggtgtgccaaacttttcagttgaattggcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_121535210_121536362
seq2: B6Ng01-157A20.g_71_1204

seq1  GAATTCCTTATTGCATGCCTGTATCACTCACTCGGAGAGGATTTGATCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTATTGCATGCCTGTATCACTCACTCGGAGAGGATTTGATCCC  50

seq1  TGAGGGTCCTGCCCTTTGTCGTGTTTGTGGCTTAGCCCTATGACAGGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTCCTGCCCTTTGTCGTGTTTGTGGCTTAGCCCTATGACAGGAAC  100

seq1  ACGCATGTACTATTAAATAGCATTTACTTTTATAAAAAGTGTCTGAGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCATGTACTATTAAATAGCATTTACTTTTATAAAAAGTGTCTGAGTCT  150

seq1  CATCTACAGTTAATATGTGGAGTGTGTAAATTCATATGTATTTGAGTCGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTACAGTTAATATGTGGAGTGTGTAAATTCATATGTATTTGAGTCGC  200

seq1  AAGACGAGAAGGATGTCTACGTTTATCTTACAGACCGTGCTGAGTTTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACGAGAAGGATGTCTACGTTTATCTTACAGACCGTGCTGAGTTTTGT  250

seq1  TCTTGGTGCATGAACTTGGATGGATGGCTGCTAGGAAACTATCCTTACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTGCATGAACTTGGATGGATGGCTGCTAGGAAACTATCCTTACTT  300

seq1  GCTTTTCTCTCGACGAGGAGATAGAGGCTGACAGGGGAGTGCCCTGCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTCTCTCGACGAGGAGATAGAGGCTGACAGGGGAGTGCCCTGCTCA  350

seq1  CGACCACCTTGCTCAGGATTCTGCAAGTCCAGACTACCACACCCTCAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACCACCTTGCTCAGGATTCTGCAAGTCCAGACTACCACACCCTCAGTG  400

seq1  TGACTCCATTCGGGGAGTAGGGATGGCTTTATCTAAGTCAATGGAAAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCCATTCGGGGAGTAGGGATGGCTTTATCTAAGTCAATGGAAAAGT  450

seq1  CAGATAACTACAGAAAGATCTGACACCTCACAGTTTCATAAAGCCCGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAACTACAGAAAGATCTGACACCTCACAGTTTCATAAAGCCCGTGG  500

seq1  TAGACCATGGTGACTTGTGATAGTAAAATGGTGAATGCATGCATGATGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCATGGTGACTTGTGATAGTAAAATGGTGAATGCATGCATGATGTT  550

seq1  AATAGTACATGCAACGGCAGAGTAATTACTTATGAATCTAGACTCTAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTACATGCAACGGCAGAGTAATTACTTATGAATCTAGACTCTAGTG  600

seq1  ACCTTTAGCGCTTGAACCTCTAAAAATAGTTATTTGGTCTGTCTAACTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTAGCGCTTGAACCTCTAAAAATAGTTATTTGGTCTGTCTAACTTT  650

seq1  CCTGACTTCTCAGTCTGAGAGTCCCACAGCTGAAAGAAAATTGGAGCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTTCTCAGTCTGAGAGTCCCACAGCTGAAAGAAAATTGGAGCATG  700

seq1  TGACATCGCTCAGTAATTTAACACTTCAGGACAATCCTTGATGCTCATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATCGCTCAGTAATTTAACACTTCAGGACAATCCTTGATGCTCATCT  750

seq1  AGACTTAGTAGGCTCCAGAGAATGTTGTTGTTGTTGCTATTTTTCTTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTAGTAGGCTCCAGAGAATGTTGTTGTTGTTGCTATTTTTCTTTAA  800

seq1  TCTGAGAAAGGAAGTCACATGACC-TTCTTATGTTACTTGAAGGTATATC  849
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCTGAGAAAGGAAGTCACATGACCTTTCTTATGTTACTTGAAGGTATATC  850

seq1  CCCAAGACAAGCTGATGGTAGCCGTGTAATGAGAGGTGCGGTGCTTGAAC  899
      ||||||||||||||||||||||||||| ||||||||||| ||||||||||
seq2  CCCAAGACAAGCTGATGGTAGCCGTGT-ATGAGAGGTGC-GTGCTTGAAC  898

seq1  TCCTGGGTACAGCAGGAGGTGCAGGCTGGCTTGAATGTGCTCTTTGGAAG  949
      |||| |||||||||||||||||| ||||||||| ||||||||||||||||
seq2  TCCT-GGTACAGCAGGAGGTGCA-GCTGGCTTG-ATGTGCTCTTTGGAAG  945

seq1  CTCTAGCCACCTGTGGCTTAGTTCTCTAAGGATTCCGGGGGACCTTTCTC  999
      |||||||||||||| |||||| |||||||||||    ||||||| |||||
seq2  CTCTAGCCACCTGT-GCTTAG-TCTCTAAGGAT---CGGGGACC-TTCTC  989

seq1  ATCCGTACCTATCCACTCATAGCCTGTGCTGT-GGGACCCTGGTGATCAA  1048
      || ||||||||| |||||||||| |||||||| |||| |||||||||| |
seq2  AT-CGTACCTAT-CACTCATAGCTTGTGCTGTGGGGATCCTGGTGATC-A  1036

seq1  GTATAACTGTAGAAAAATCTAACCGTCCAAGTTCTCAGGGTGGTATTTTT  1098
      ||||||||||||||| |||||| ||| |||| ||||  | ||  || |||
seq2  GTATAACTGTAGAAAGATCTAAACGT-CAAGGTCTCCAGCTG--ATATTT  1083

seq1  AGAAGAACTCATTCAAATA--GTGTGGCACCAACATTTTTCAGTTTGATT  1146
      |||||||| ||||||||||  |||||   |||| | |||||||||  |  
seq2  AGAAGAACGCATTCAAATAAGGTGTG---CCAA-ACTTTTCAGTTGAA--  1127

seq1  TTGGCAG  1153
      |||||||
seq2  TTGGCAG  1134