BAC Information

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BAC

Clone NameB6Ng01-158M13
Chromosome6 (Build37)14 (Build37)
Map Location 18,835,357 - 18,835,96892,577,836 - 92,578,882
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158M13.bB6Ng01-158M13.g
ACCDH952641DH952642
length9851,040
definitionDH952641|Mus musculus domesticus DNA, BAC clone: B6Ng01-158M13, 5' end.DH952642|Mus musculus domesticus DNA, BAC clone: B6Ng01-158M13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,357 - 18,835,968)(92,577,836 - 92,578,882)
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaactccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacatgccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggtttatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagcaatttgtacatcttttcagtgctggtgtttgtatcca
gagatctgcacagagcaggcaaaaactattctcagctatgatcttatccc
ttaaaatactggagaatggtgatgaaaaaattcgtaaaagttcattgcat
ttaatgtagacatagcatatttattcatctgtaccataggagcaaataat
ttcagttcattttgtatggtagatcttgtttggtaattagctatctgtat
actttaccctgttaattctaataattaaaggttcatctttacaccacttt
tgttttttgggggagtacaaggtaatacacagagcagtaacagaccttga
cattcaataatgaccaataatatttttaacatgtt
gaattctcatgaatacagaaggactttaagtactttgttagaattcatgc
atttacaccagtcttcaacacgccatttagtgtcacatattgtcatctag
catggaaccataatgacatctacattatttagattctcttagattctatt
ttgtgaatatagagcatttaataaaaatttgggggcaaaataataacaaa
tgctcttatgttgttgttttttttttcaacacaaatgacttcttattttt
ctttctgattaaatactagaaaagaagttcattcgacaatgacttcttac
catccattggggcccacgttattctgttgcataaagtgaaattaggatta
ccatttcactaatttttctaaagctttccatcctgcttgaaaggcaagag
tagctatttattgtggttgtaatatgattatacactttgacttttgaaaa
tacataggagctaatgatcagtgctagataatggcataggtgaatcaatt
agctgagtcactgagagtatggttgacatgtctaggttcagcttaatcct
tgagacacatacgttgaaagacaataactaatatgactggttctgcacct
tgacacaaacataaacacacacatacacaaacacacacttctaaataggt
gggcataagatctcatgtctattatgccagcacttatacgacttagtagg
agggtttttccagttgttatttattttgtaagtttaaaagcaatagggat
taaataaggagctctaggttagcctgggtttacatgctccctcctgtttc
aaacaatatgctaggaagtaaataagtgagaagtgatagagaaagatagt
ttaaaacaaaaagagaaatgcaaataaagaattgctataagtcatctttc
tgggttattaatttcagttcatatcctacctatagtagaaaaataacata
tatacttatatactgcaaacctacttcagaattctcattctatagccatg
taaggtaattctttcagtgctgaatgttacacacccacgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835357_18835968
seq2: B6Ng01-158M13.b_48_660 (reverse)

seq1  GCTTTACTACAGAGCAATTGTGGTAAAAACTGCATGGTACTGGTATAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTACTACAGAGCAATTGTGGTAAAAACTGCATGGTACTGGTATAGAG  50

seq1  ACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAGATGAACCCA  100
      |||||||||||||||||||||||||||||||||||||||| || ||||||
seq2  ACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATAAACCCA  100

seq1  CACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTG  150

seq1  GAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTAT  200
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GAAGAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGTTAT  200

seq1  CTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTAAGGTC  250
      | |||||||||||| |||||||||||||||||||||| ||||||||||||
seq2  CATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTAAGGTC  250

seq1  AAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACT  300
      |||||||| |||||||| ||||||||||||||||||||||||||||||||
seq2  AAATCTAAATGGATCAAAGAACTTCACATAAAACCAGAGACACTGAAACT  300

seq1  TATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGGGGAAA  350
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAA  350

seq1  AGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAATCGAC  399
      | ||||||||||||||||||||||| |||||||| || | |||||| |||
seq2  AATTCCTGAACAGAACAGCAATGGCATGTGCTGTAAGATCGAGAATTGAC  400

seq1  AAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACACCGT  450

seq1  CAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATC  499
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CAATAAGACAAAAAGGCCACCAACAGATTGGGAAAGGATCTTTACCTATC  500

seq1  CTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAGAAG  550

seq1  GTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCAGAACT  599
      ||||| |||||||||||||| ||||||||||| |||||||||||||||||
seq2  GTGGAGTTCAGAAAATCAAACAACCCCATTAAAAAATGGGGCTCAGAACT  600

seq1  GAACAAAGAATTC  612
      |||||||||||||
seq2  GAACAAAGAATTC  613

seq1: chr14_92577836_92578882
seq2: B6Ng01-158M13.g_68_1107

seq1  GAATTCTCATGAATACAGAAGGACTTTAAGTACTTTGTTAGAATTCATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATGAATACAGAAGGACTTTAAGTACTTTGTTAGAATTCATGC  50

seq1  ATTTACACCAGTCTTCAACACGCCATTTAGTGTCACATATTGTCATCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACACCAGTCTTCAACACGCCATTTAGTGTCACATATTGTCATCTAG  100

seq1  CATGGAACCATAATGACATCTACATTATTTAGATTCTCTTAGATTCTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAACCATAATGACATCTACATTATTTAGATTCTCTTAGATTCTATT  150

seq1  TTGTGAATATAGAGCATTTAATAAAAATTTGGGGGCAAAATAATAACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAATATAGAGCATTTAATAAAAATTTGGGGGCAAAATAATAACAAA  200

seq1  TGCTCTTATGTTGTTGTTTTTTTTTTCAACACAAATGACTTCTTATTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTATGTTGTTGTTTTTTTTTTCAACACAAATGACTTCTTATTTTT  250

seq1  CTTTCTGATTAAATACTAGAAAAGAAGTTCATTCGACAATGACTTCTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGATTAAATACTAGAAAAGAAGTTCATTCGACAATGACTTCTTAC  300

seq1  CATCCATTGGGGCCCACGTTATTCTGTTGCATAAAGTGAAATTAGGATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATTGGGGCCCACGTTATTCTGTTGCATAAAGTGAAATTAGGATTA  350

seq1  CCATTTCACTAATTTTTCTAAAGCTTTCCATCCTGCTTGAAAGGCAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCACTAATTTTTCTAAAGCTTTCCATCCTGCTTGAAAGGCAAGAG  400

seq1  TAGCTATTTATTGTGGTTGTAATATGATTATACACTTTGACTTTTGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTATTTATTGTGGTTGTAATATGATTATACACTTTGACTTTTGAAAA  450

seq1  TACATAGGAGCTAATGATCAGTGCTAGATAATGGCATAGGTGAATCAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAGGAGCTAATGATCAGTGCTAGATAATGGCATAGGTGAATCAATT  500

seq1  AGCTGAGTCACTGAGAGTATGGTTGACATGTCTAGGTTCAGCTTAATCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGTCACTGAGAGTATGGTTGACATGTCTAGGTTCAGCTTAATCCT  550

seq1  TGAGACACATACGTTGAAAGACAATAACTAATATGACTGGTTCTGCACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACACATACGTTGAAAGACAATAACTAATATGACTGGTTCTGCACCT  600

seq1  TGACACAAACATAAACACACACATACACAAACACACACTTCTAAATAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACAAACATAAACACACACATACACAAACACACACTTCTAAATAGGT  650

seq1  GGGCATAAGATCTCATGTCTATTATGCCAGCACTTATACGACTTAGTAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATAAGATCTCATGTCTATTATGCCAGCACTTATACGACTTAGTAGG  700

seq1  AGGGTTTTTCCAGTTGTTATTTATTTTGTAAGTTTAAAAGCAATAGGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTTTCCAGTTGTTATTTATTTTGTAAGTTTAAAAGCAATAGGGAT  750

seq1  TAAATAAGGAGCTCTAGGTTAGCCTGGGTTTACATGCTCCCTCCTGTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAGGAGCTCTAGGTTAGCCTGGGTTTACATGCTCCCTCCTGTTTC  800

seq1  AAACAATATGCTAGGAAGTAAATAAGTGAGAAGTGATAGAGAAAGATAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATATGCTAGGAAGTAAATAAGTGAGAAGTGATAGAGAAAGATAGT  850

seq1  TTAAAAACAAAAAGAGAAATGCAAATAAAGAATTGCTATAAGTCATCTTT  900
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TT-AAAACAAAAAGAGAAATGCAAATAAAGAATTGCTATAAGTCATCTTT  899

seq1  CTGGGTTATTAATTTCAGTTCAATATCCTACCTATAGTAAGAAAAATAAC  950
      ||||||||||||||||||||| |||||||||||||||| |||||||||||
seq2  CTGGGTTATTAATTTCAGTTC-ATATCCTACCTATAGT-AGAAAAATAAC  947

seq1  ATATATACTTATATACTGCCAAACCTACTTCAAGAATTCTCATTCTATAA  1000
      |||||||||||||||||| |||||||||||| |||||||||||||||| |
seq2  ATATATACTTATATACTG-CAAACCTACTTC-AGAATTCTCATTCTAT-A  994

seq1  GCCATGTAAGGTAATTCTTTCAGTGCTGAAATGTTACACACACACGC  1047
      |||||||||||||||||||||||||||| |||||||||||| |||||
seq2  GCCATGTAAGGTAATTCTTTCAGTGCTG-AATGTTACACACCCACGC  1040