BAC Information

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BAC

Clone NameB6Ng01-158O22
Chromosome14 (Build37)
Map Location 58,418,492 - 58,509,531
singlet/doubletdoublet
Overlap geneSap18, F630043A04Rik, Mrp63, Zdhhc20
Upstream gene9830124H08Rik, LOC219106, LOC668118, Zmym2, LOC100042817, B020004C17Rik, Gja3, Gjb2, LOC100043515, Gjb6, LOC668140, Cryl1, LOC668090, AU040096, Ift88, Il17d, N6amt2, Xpo4, Lats2
Downstream geneEfha1, LOC668160, Fgf9, LOC100043554, EG668177
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-158O22.bB6Ng01-158O22.g
ACCDH952745DH952746
length1,0401,097
definitionDH952745|Mus musculus domesticus DNA, BAC clone: B6Ng01-158O22, 5' end.DH952746|Mus musculus domesticus DNA, BAC clone: B6Ng01-158O22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,508,495 - 58,509,531)(58,418,492 - 58,419,596)
sequence
gaattcattcctctccccttgcgcatccccatccctctcgtcacccagtc
ctagatggcctcctacacatccttagcactctcctctcttttccaccaag
gcacccccaaatcccatgggcgggcctgagcagaagccccgccccaactt
caggccccgcctccttcggccgggtagccccaccccctacggggattgcc
aggcgcgggactaggggcggagcggcaggatgcggggcaggggcggaccc
ggtccaggcgccgggaggggcggagttgcagcgtcgcccttcacagctcg
cagcgggatgagaggcgggcccggaggcgggcccgagggcggggtcaggg
gcggacccgggccaggcgcagggaggggcggagttgtggcgtcgcccttc
gccactgcttgcggcggcggagcctcgggggcggggaagctggcgacagg
gccgctggggtcttgtggtcctacagaatcgtgggcagcgggacccggca
gtcagcagaggaacatggcgccctggacactctggcgctgctgccaacgc
gtggtgggctgggttccggtgctcttcatcacctttgtggtcgtctggtc
ctactacgcgtacgtggtggagctgtgcgtgagtgagtacgggaggcgcg
ggcggcgggccgggccgcgggtggcaggccgaggcctcggcgccgcgttc
tgattccgcggggcggcctgcgcttccccagcccgtgggttccacgtccg
agggttccggcccgcgcttctccggcggtgggggcccctgtccgtgggtt
tctgcccacggctcgctgctcgaggggtcccgagttcgggcctgcgcgcc
gcccacgctccaagcttccgggtggctgcagtcgccttggggctcccacc
cttctgtgacggaatgctcacaagggcctttccttttgaactagagaacc
ccttctgagacggcttgtgagtcagttttggctaaacactccgctacaca
cggcacaagagatccttttccttccagaattgtggctccc
gaattctggccaggtaaaatttagttgcaaaaatacataagaaggtaaca
gttgtctgaagttttataacttattttattacacagtgaactacatacag
ttatgaaaaaataagattttacttgaactatgcacactggtgtatgtata
gtttgtgtcagtttcgatattatatcttccaaattgtaatttgtttttta
tgtatatgtgtgtttaccttcatgtatgtgtgtgccccgcataaatgcct
ggtgcctactgaggtcacaagtgggtatcagatctctgggactggagtta
gaaatggctgtgagctgctctgttggtgcgggagttgaactcagttcttc
tgcaagagtgacagtgtccctccgtctgaaagactgagttctgttacagg
aacatggagaaataaatacctggcgcagaaaacgggggacagtgtggtcc
ttctgggtattttccctccatgcattgagtacggcgatgtggagatttgt
aacgttcacagtaacactgcagggcgttctttagctctctccttggtacc
gttccatcagggttgtcattctgaagtgtctctctagggttctgccgttt
gttccagtgcacagaatgctatttcaactttgcctttcacttacctcttt
gttggcaaaagcagtgtaaagatgaactaaactgactgttgctgccatgt
ttacattttcagttaccttgccctggattgtgctgtattagcacaaggga
ctgtatttagttctgagttcagataagtatttttaatttaataatggctt
aagttgtaaaaggggcctgcagtttgtcttaacatttcatgttcttggct
ttaggattcctttattttaaaaaaaaattttttttggttatttttgtgta
taggtgcattgtgtaagtgctacagcttttatgtcagaggacatctttgg
aatattttttctatcacatttacttgagagttctggggattgaacttgga
cagcagcttatgtagaagttgactacctgctgagccgtcccactggcaaa
ttaatttgttagtgtggcgtatcgaagtgtcgtagcacatgtgtgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_58508495_58509531
seq2: B6Ng01-158O22.b_47_1086 (reverse)

seq1  GGGAGCAACAA-TCTGGGAGGAAAA-GATTTCTTTGTG-CGTGTGT-GCG  46
      |||||| |||| ||||| ||||||| ||| || ||||| ||||||| |||
seq2  GGGAGCCACAATTCTGGAAGGAAAAGGATCTC-TTGTGCCGTGTGTAGCG  49

seq1  TGTGT-TTTAGCC-AAACTGACCTCACAAGCCGTCTCAGAAGGGGTTCTC  94
       | || ||||||| ||||||| ||||||||||||||||||||||||||||
seq2  -GAGTGTTTAGCCAAAACTGA-CTCACAAGCCGTCTCAGAAGGGGTTCTC  97

seq1  TAGTTCAAAAGGAAAGGCCTTTGTGAGCATTCCGTCACAGAAGGGTGGGA  144
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TAGTTCAAAAGGAAAGGCCCTTGTGAGCATTCCGTCACAGAAGGGTGGGA  147

seq1  GCCCCAAGGCGACTGCAGCCACCCGGAAGCTTGGAGCGTGGGCGGCGCGC  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAAGGCGACTGCAGCCACCCGGAAGCTTGGAGCGTGGGCGGCGCGC  197

seq1  AGGCCCGAACTCGGGACCCCTCGAGCAGCGAGCCGTGGGCAGAAACCCAC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCGAACTCGGGACCCCTCGAGCAGCGAGCCGTGGGCAGAAACCCAC  247

seq1  GGACAGGGGCCCCCACCGCCGGAGAAGCGCGGGCCGGAACCCTCGGACGT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGGGGCCCCCACCGCCGGAGAAGCGCGGGCCGGAACCCTCGGACGT  297

seq1  GGAACCCACGGGCTGGGGAAGCGCAGGCCGCCCCGCGGAATCAGAACGCG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCCACGGGCTGGGGAAGCGCAGGCCGCCCCGCGGAATCAGAACGCG  347

seq1  GCGCCGAGGCCTCGGCCTGCCACCCGCGGCCCGGCCCGCCGCCCGCGCCT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCGAGGCCTCGGCCTGCCACCCGCGGCCCGGCCCGCCGCCCGCGCCT  397

seq1  CCCGTACTCACTCACGCACAGCTCCACCACGTACGCGTAGTAGGACCAGA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTACTCACTCACGCACAGCTCCACCACGTACGCGTAGTAGGACCAGA  447

seq1  CGACCACAAAGGTGATGAAGAGCACCGGAACCCAGCCCACCACGCGTTGG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACCACAAAGGTGATGAAGAGCACCGGAACCCAGCCCACCACGCGTTGG  497

seq1  CAGCAGCGCCAGAGTGTCCAGGGCGCCATGTTCCTCTGCTGACTGCCGGG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCGCCAGAGTGTCCAGGGCGCCATGTTCCTCTGCTGACTGCCGGG  547

seq1  TCCCGCTGCCCACGATTCTGTAGGACCACAAGACCCCAGCGGCCCTGTCG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGCTGCCCACGATTCTGTAGGACCACAAGACCCCAGCGGCCCTGTCG  597

seq1  CCAGCTTCCCCGCCCCCGAGGCTCCGCCGCCGCAAGCAGTGGCGAAGGGC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTCCCCGCCCCCGAGGCTCCGCCGCCGCAAGCAGTGGCGAAGGGC  647

seq1  GACGCCACAACTCCGCCCCTCCCTGCGCCTGGCCCGGGTCCGCCCCTGAC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGCCACAACTCCGCCCCTCCCTGCGCCTGGCCCGGGTCCGCCCCTGAC  697

seq1  CCCGCCCTCGGGCCCGCCTCCGGGCCCGCCTCTCATCCCGCTGCGAGCTG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCCCTCGGGCCCGCCTCCGGGCCCGCCTCTCATCCCGCTGCGAGCTG  747

seq1  TGAAGGGCGACGCTGCAACTCCGCCCCTCCCGGCGCCTGGACCGGGTCCG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGGCGACGCTGCAACTCCGCCCCTCCCGGCGCCTGGACCGGGTCCG  797

seq1  CCCCTGCCCCGCATCCTGCCGCTCCGCCCCTAGTCCCGCGCCTGGCAATC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGCCCCGCATCCTGCCGCTCCGCCCCTAGTCCCGCGCCTGGCAATC  847

seq1  CCCGTAGGGGGTGGGGCTACCCGGCCGAAGGAGGCGGGGCCTGAAGTTGG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTAGGGGGTGGGGCTACCCGGCCGAAGGAGGCGGGGCCTGAAGTTGG  897

seq1  GGCGGGGCTTCTGCTCAGGCCCGCCCATGGGATTTGGGGGTGCCTTGGTG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGGGCTTCTGCTCAGGCCCGCCCATGGGATTTGGGGGTGCCTTGGTG  947

seq1  GAAAAGAGAGGAGAGTGCTAAGGATGTGTAGGAGGCCATCTAGGACTGGG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAGAGGAGAGTGCTAAGGATGTGTAGGAGGCCATCTAGGACTGGG  997

seq1  TGACGAGAGGGATGGGGATGCGCAAGGGGAGAGGAATGAATTC  1037
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGAGAGGGATGGGGATGCGCAAGGGGAGAGGAATGAATTC  1040

seq1: chr14_58418492_58419596
seq2: B6Ng01-158O22.g_70_1166

seq1  GAATTCTGGCCAGGTAAAATTTAGTTGCAAAAATACATAAGAAGGTAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGCCAGGTAAAATTTAGTTGCAAAAATACATAAGAAGGTAACA  50

seq1  GTTGTCTGAAGTTTTATAACTTATTTTATTACACAGTGAACTACATACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCTGAAGTTTTATAACTTATTTTATTACACAGTGAACTACATACAG  100

seq1  TTATGAAAAAATAAGATTTTACTTGAACTATGCACACTGGTGTATGTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAAAAAATAAGATTTTACTTGAACTATGCACACTGGTGTATGTATA  150

seq1  GTTTGTGTCAGTTTCGATATTATATCTTCCAAATTGTAATTTGTTTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGTCAGTTTCGATATTATATCTTCCAAATTGTAATTTGTTTTTTA  200

seq1  TGTATATGTGTGTTTACCTTCATGTATGTGTGTGCCCCGCATAAATGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATGTGTGTTTACCTTCATGTATGTGTGTGCCCCGCATAAATGCCT  250

seq1  GGTGCCTACTGAGGTCACAAGTGGGTATCAGATCTCTGGGACTGGAGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCTACTGAGGTCACAAGTGGGTATCAGATCTCTGGGACTGGAGTTA  300

seq1  GAAATGGCTGTGAGCTGCTCTGTTGGTGCGGGAGTTGAACTCAGTTCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGCTGTGAGCTGCTCTGTTGGTGCGGGAGTTGAACTCAGTTCTTC  350

seq1  TGCAAGAGTGACAGTGTCCCTCCGTCTGAAAGACTGAGTTCTGTTACAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGAGTGACAGTGTCCCTCCGTCTGAAAGACTGAGTTCTGTTACAGG  400

seq1  AACATGGAGAAATAAATACCTGGCGCAGAAAACGGGGGACAGTGTGGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGGAGAAATAAATACCTGGCGCAGAAAACGGGGGACAGTGTGGTCC  450

seq1  TTCTGGGTATTTTCCCTCCATGCATTGAGTACGGCGATGTGGAGATTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGTATTTTCCCTCCATGCATTGAGTACGGCGATGTGGAGATTTGT  500

seq1  AACGTTCACAGTAACACTGCAGGGCGTTCTTTAGCTCTCTCCTTGGTACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTTCACAGTAACACTGCAGGGCGTTCTTTAGCTCTCTCCTTGGTACC  550

seq1  GTTCCATCAGGGTTGTCATTCTGAAGTGTCTCTCTAGGGTTCTGCCGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCATCAGGGTTGTCATTCTGAAGTGTCTCTCTAGGGTTCTGCCGTTT  600

seq1  GTTCCAGTGCACAGAATGCTATTTCAACTTTGCCTTTCACTTACCTCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAGTGCACAGAATGCTATTTCAACTTTGCCTTTCACTTACCTCTTT  650

seq1  GTTGGCAAAAGCAGTGTAAAGATGAACTAAACTGACTGTTGCTGCCATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCAAAAGCAGTGTAAAGATGAACTAAACTGACTGTTGCTGCCATGT  700

seq1  TTACATTTTCAGTTACCTTGCCCTGGATTGTGCTGTATTAGCACAAGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTTTCAGTTACCTTGCCCTGGATTGTGCTGTATTAGCACAAGGGA  750

seq1  CTGTATTTAGTTCTGAGTTCAGATAAGTATTTTTAATTTAATAATGGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTTAGTTCTGAGTTCAGATAAGTATTTTTAATTTAATAATGGCTT  800

seq1  AAGTTGTAAAAGGGGCCTGCAGTTTGTCTTAACATTTCATGTTCTTGGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGTAAAAGGGGCCTGCAGTTTGTCTTAACATTTCATGTTCTTGGCT  850

seq1  TTAGGATTCCTTTATTTTAAAAAAAAATTTTTTTTTGGTTATTTTTGTGT  900
      ||||||||||||||||||||||||||| ||||||||||||||||||||| 
seq2  TTAGGATTCCTTTATTTTAAAAAAAAA-TTTTTTTTGGTTATTTTTGTG-  898

seq1  TATAGGTGCATTGTGTAAGTGCTACAGCTTTTATGTCAGAGGACATCTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TATAGGTGCATTGTGTAAGTGCTACAGCTTTTATGTCAGAGGACATC-TT  947

seq1  TGGAATA-TTTTTCTATCCACATTTACTTGAGAGTTCTGGGGATTGAACT  999
      ||||||| ||||||||| ||||||||||||||||||||||||||||||||
seq2  TGGAATATTTTTTCTAT-CACATTTACTTGAGAGTTCTGGGGATTGAACT  996

seq1  TGGGACAGCCAGCTTATGTAGTAAGTGACTACCTGCTGAGCCGTCCCACT  1049
      | |||||| |||||||||||| |  |||||||||||||||||||||||||
seq2  T-GGACAG-CAGCTTATGTAGAAGTTGACTACCTGCTGAGCCGTCCCACT  1044

seq1  GGCAGATTTATTTTGTGTATGTGTGGCGTATGGGAGTGTCGTAGCACATG  1099
      |||| ||| |||   |||  ||||||||||| | ||||||||||||||||
seq2  GGCAAATTAATT---TGTTAGTGTGGCGTATCGAAGTGTCGTAGCACATG  1091

seq1  TGTGGA  1105
      ||||||
seq2  TGTGGA  1097