BAC Information

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BAC

Clone NameB6Ng01-159F09
Chromosome14 (Build37)
Map Location 96,851,304 - 96,852,431
singlet/doubletsinglet
Overlap geneKlhl1
Upstream gene4921530L21Rik
Downstream geneLOC100043366, LOC668654
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159F09.bB6Ng01-159F09.g
ACCDH953029DH953030
length4161,116
definitionDH953029|Mus musculus domesticus DNA, BAC clone: B6Ng01-159F09, 5' end.DH953030|Mus musculus domesticus DNA, BAC clone: B6Ng01-159F09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttgtgtaattctaaccatgcaagtgaaaggtctatatgacaagtacttc
aactctctgaagaaagaaatcgaataccttagaaggtgctagcagctaac
ctttggactgagcacagggtccccaatggaggagctagaaaaagaaccaa
aggagctgaaggggtttgctgccccatagaagtaacaacaataaccagta
cccccagagctcccagggactaaaccaccaaccaaagagtacacatggag
agacccatggctccagctgcattggtaacagaggatggtcttgtaggtca
tcaataggaggagagacccttggtcctgtgaaggctcgatgccccagtgt
agggtaatgccagcatagggaagcagaagtgggtgggttggtgagcaggg
gggcggggggggagat

gaattcatatgcttagtaatgatattaaagtattctttttatattttgct
ttactaaattgaaatcactaaagtgtgacaattggagtactggatggata
ttaggagaattttcatttacaatccaggtcaccatattaaaccataaagg
gcatacagttttggacattattgattaaatatgaatagatgaaaatagtg
ttaaggaatacacaatgccttaatggaatccattttaattaaaaataaaa
ttaaacatatttttggttaacagtatatttttgacttctttatttcctta
ctcttgctaaactggcaagaaaaatcatgttcaaaccttttgaggaacac
agtgccttctgataatctttcgcattatagaaagattttagtttccatat
tgctggcagagtcatacatttcagagaaaaagcaaagaagtagtagaaaa
catttcacagtgtgatatgaaatatagtaacgaggaatttgaggggattg
acttcatccacataatctacacaaacacacacacatacacacacacttac
acacacacacacacacaaatgtaaaacccagggttcacctatgagaacaa
aaatgtgtgacattagtgtttccaagtctcgcttactttgtttaaaaatg
gtttcctgcaagtgttatgctatcttctacttcctgaatagaatttaatt
atgtggttctgtatcaagttttctgttgacagatatcttagaatagtgaa
cattttaaaagcaaatgtgaatcgtcctggaaataaatattgatatgaag
gccactctggtgaataaattatagctttctgacatatgaactgttgaagt
gaagacaggtcatataaccactgcacattcactttcttgagaaactccac
gttaattttttttttatagtaatgtaccagcgtcagcgtactagcagcaa
tgttgttggtccttctatcatgatgatattcattcagacagatgaaatga
atagcaaagcagtatctatttgcattttcttgacagctaagatgttgaat
gctttcaaatttattggcattttattatttcttaaagtccctactataca
tttcccatgtattatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_96851304_96852431
seq2: B6Ng01-159F09.g_67_1182 (reverse)

seq1  AATAATACATGGGATAATGATAT-GTA-GGACTCTAAAGAATAAATAAAA  48
      |||||||||||||| |||| ||| ||| ||||| | |||||  |||||||
seq2  AATAATACATGGGA-AATG-TATAGTAGGGACT-TTAAGAAATAATAAAA  47

seq1  ATTGCCAATAAATATTTGAAAGCATTCAACATCCTTAGCTGTCAGGAAAA  98
        |||||||||  ||||||||||||||||||| ||||||||||| |||||
seq2  --TGCCAATAA--ATTTGAAAGCATTCAACAT-CTTAGCTGTCAAGAAAA  92

seq1  TGCAAATAGATACTGCTTTGCTATTTCATTTCATTCCTGTCTGAATGGAT  148
      ||||||||||||||||||||||| ||||||||||  ||||||||||| ||
seq2  TGCAAATAGATACTGCTTTGCTA-TTCATTTCAT--CTGTCTGAATGAAT  139

seq1  ATCATCATGATAAGAAGGGCCAACCACATTTGCTGCTAGTACGGCTGACG  198
      ||||||||||| |||||| ||||| ||| ||||||||||||| |||||||
seq2  ATCATCATGAT-AGAAGGACCAACAACA-TTGCTGCTAGTAC-GCTGACG  186

seq1  CTGGTACATTACTATAAAAAAAAAATTAACGTGGAGTTTTCTCAAGAAAG  248
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTGGTACATTACTATAAAAAAAAAATTAACGTGGAG-TTTCTCAAGAAAG  235

seq1  TGAATGTGCAGTGGTTATATGACCTGTCTTCACTTCAACAGTTCATATGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTGCAGTGGTTATATGACCTGTCTTCACTTCAACAGTTCATATGT  285

seq1  CAGAAAGCTATAATTTATTCACCAGAGTGGCCTTCATATCAATATTTA-T  347
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CAGAAAGCTATAATTTATTCACCAGAGTGGCCTTCATATCAATATTTATT  335

seq1  TCCAGGACGATTCACATTTGCTTTTAAAATGTTCACTATTCTAAGATATC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGACGATTCACATTTGCTTTTAAAATGTTCACTATTCTAAGATATC  385

seq1  TGTCAACAGAAAACTTGATACAGAACCACATAATTAAATTCTATTCAGGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAACAGAAAACTTGATACAGAACCACATAATTAAATTCTATTCAGGA  435

seq1  AGTAGAAGATAGCATAACACTTGCAGGAAACCATTTTTAAACAAAGTAAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAAGATAGCATAACACTTGCAGGAAACCATTTTTAAACAAAGTAAG  485

seq1  CGAGACTTGGAAACACTAATGTCACACATTTTTGTTCTCATAGGTGAACC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGACTTGGAAACACTAATGTCACACATTTTTGTTCTCATAGGTGAACC  535

seq1  CTGGGTTTTACATTTGTGTGTGTGTGTGTGTGTAAGTGTGTGTGTATGTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTTTACATTTGTGTGTGTGTGTGTGTGTAAGTGTGTGTGTATGTG  585

seq1  TGTGTGTTTGTGTAGATTATGTGGATGAAGTCAATCCCCTCAAATTCCTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTTGTGTAGATTATGTGGATGAAGTCAATCCCCTCAAATTCCTC  635

seq1  GTTACTATATTTCATATCACACTGTGAAATGTTTTCTACTACTTCTTTGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTATATTTCATATCACACTGTGAAATGTTTTCTACTACTTCTTTGC  685

seq1  TTTTTCTCTGAAATGTATGACTCTGCCAGCAATATGGAAACTAAAATCTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTCTGAAATGTATGACTCTGCCAGCAATATGGAAACTAAAATCTT  735

seq1  TCTATAATGCGAAAGATTATCAGAAGGCACTGTGTTCCTCAAAAGGTTTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAATGCGAAAGATTATCAGAAGGCACTGTGTTCCTCAAAAGGTTTG  785

seq1  AACATGATTTTTCTTGCCAGTTTAGCAAGAGTAAGGAAATAAAGAAGTCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGATTTTTCTTGCCAGTTTAGCAAGAGTAAGGAAATAAAGAAGTCA  835

seq1  AAAATATACTGTTAACCAAAAATATGTTTAATTTTATTTTTAATTAAAAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATACTGTTAACCAAAAATATGTTTAATTTTATTTTTAATTAAAAT  885

seq1  GGATTCCATTAAGGCATTGTGTATTCCTTAACACTATTTTCATCTATTCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCCATTAAGGCATTGTGTATTCCTTAACACTATTTTCATCTATTCA  935

seq1  TATTTAATCAATAATGTCCAAAACTGTATGCCCTTTATGGTTTAATATGG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAATCAATAATGTCCAAAACTGTATGCCCTTTATGGTTTAATATGG  985

seq1  TGACCTGGATTGTAAATGAAAATTCTCCTAATATCCATCCAGTACTCCAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTGGATTGTAAATGAAAATTCTCCTAATATCCATCCAGTACTCCAA  1035

seq1  TTGTCACACTTTAGTGATTTCAATTTAGTAAAGCAAAATATAAAAAGAAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACACTTTAGTGATTTCAATTTAGTAAAGCAAAATATAAAAAGAAT  1085

seq1  ACTTTAATATCATTACTAAGCATATGAATTC  1128
      |||||||||||||||||||||||||||||||
seq2  ACTTTAATATCATTACTAAGCATATGAATTC  1116


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