BAC Information

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BAC

Clone NameB6Ng01-159O05
Chromosome14 (Build37)
Map Location 38,460,001 - 38,460,663
singlet/doubletsinglet
Overlap genenone
Upstream geneGcap14, LOC100040341, LOC670331, Rgr, Lrrc21, Lrrc22, Pcdh21, 2610528A11Rik, Ghitm
Downstream geneLOC382871, LOC382872, Nrg3, LOC100041521
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159O05.bB6Ng01-159O05.g
ACCDH953420DH953421
length1,174942
definitionDH953420|Mus musculus domesticus DNA, BAC clone: B6Ng01-159O05, 5' end.DH953421|Mus musculus domesticus DNA, BAC clone: B6Ng01-159O05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtacccaatttttaatagggttatttagttt
tctggagtccaacttcttgagttttatatatattggatattagcccccta
caggactttggattggaaaagatcttttcccaatctgttggttgctattt
tgtcttattgagcttacagaagctttgcaatttcatgaggtcctatttgt
caattctcaatcttacagcacaagccattgctgttccgttcaggaatctt
tcccctatgctgatattttcaaggctcttccccactttcacctatataag
tttcagtgttgctggttttatgtagagttccttgattcacttagacttga
gctttgtacaaagggataaaaatgaatcaattcaaattattctacatgct
atctgccagttgagccagcaccatttgttgaagatgctgtcttctttcca
caggatggttttagttcctttgtcaaagatcaagtgatcataggtgtgtg
ggttcacttctgggtcttcaattctattccgttcacctacctgactgtcg
ctgtaccagtaccacatagttttaatcacaattgctcgatagtacagctt
gaggtcagacatggtgattcccccagaggttcttttattcttgagaatag
tttttgctatcctaggtttttttgttatttcagatgaatttgcaaatttc
cctttgtaatttgttggagaattgagttagaattttgatggggatttcat
tgaatctgaagattgcttttggtaggatagccatttttgctatattaatc
ctgccaatccatgagtatgggagatctttcattttctgagatcttctttg
atttctttcttcatagacttgaagttcttaacatacagatcttttacttc
cttagttagagtcacaccaaggcattttatactatttgtgactattttga
agagtgttgttccctaatttcttctcagcctgtttatcccttgttgtaga
gaaggccaattatttgtctgagtcaattttgtatcatccacttcacctga
atgtttaggaaggctctgtggcaatttgggggcactatagtgaactcatc
aaatcaactggaaaacggtattagacatctcttccaattgattccctcga
acttctttgtgtatatgataggtg
gaattccatggtgagagaatcactacagactcagtgtcattcaagacaaa
atctagaaaagcagtcactacccttaaagtctgtagatggggagaaggga
actacagcattgtttttatctccctcaaggatttatagcatcagaccata
cactcatgtactgttcctccctaagttcagaagaattcctataattagaa
ggaaacccaaatgaccatctatcatgtttctggtgttaaggagtgcactg
tgcccacgataattcctacactgaagtcctaacccacaagtagaaatgaa
actgttcaaagccataaagataaagcagaatgtgctgaatttctttatcc
aaggaaatctagttaagaggaaaacctaaggttacacacaaaggacaaac
aaaagttacatacaataaggatacctcctgtggcaatggaaagacagtat
ctccccccaccccaacccctgctgccctgcactcctggccaaaaggaggc
atgcttagaaacatccgattctgcctatgtcttttgacttctaatctcta
gaaaacaaataaataaatttctgttgttgaaaccacctgtctgtagaatt
ccatgaaactgtgaactttacctcctccatcacagttcccaaaataatga
ctctgagactaaattaattatgaacaaatgcttaagccataaaattttct
cattttctgatcagcttgtaatttatacaatccatttattctcttctatg
tatgccacatggtttgctatctctcctcagtctcactgcagctctggggt
gaaatatcccacccctgactctaatctagaatcctgtctcccttatgtaa
gtcatatctcctatttcctgcctaatatcttttgcctaagctataaacca
acagattgttttttattgacaggtgatgctttcatgcattat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_38460001_38460663
seq2: B6Ng01-159O05.g_68_730 (reverse)

seq1  TTTAGTCTCAGAGTCATTATTTTGGGAACTGTGATGGAGGAGGTAAAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTCTCAGAGTCATTATTTTGGGAACTGTGATGGAGGAGGTAAAGTT  50

seq1  CACAGTTTCATGGAATTCTACAGACAGGTGGTTTCAACAACAGAAATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTTCATGGAATTCTACAGACAGGTGGTTTCAACAACAGAAATTTA  100

seq1  TTTATTTGTTTTCTAGAGATTAGAAGTCAAAAGACATAGGCAGAATCGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTGTTTTCTAGAGATTAGAAGTCAAAAGACATAGGCAGAATCGGA  150

seq1  TGTTTCTAAGCATGCCTCCTTTTGGCCAGGAGTGCAGGGCAGCAGGGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTAAGCATGCCTCCTTTTGGCCAGGAGTGCAGGGCAGCAGGGGTT  200

seq1  GGGGTGGGGGGAGATACTGTCTTTCCATTGCCACAGGAGGTATCCTTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGGGGGAGATACTGTCTTTCCATTGCCACAGGAGGTATCCTTATT  250

seq1  GTATGTAACTTTTGTTTGTCCTTTGTGTGTAACCTTAGGTTTTCCTCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTAACTTTTGTTTGTCCTTTGTGTGTAACCTTAGGTTTTCCTCTTA  300

seq1  ACTAGATTTCCTTGGATAAAGAAATTCAGCACATTCTGCTTTATCTTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGATTTCCTTGGATAAAGAAATTCAGCACATTCTGCTTTATCTTTAT  350

seq1  GGCTTTGAACAGTTTCATTTCTACTTGTGGGTTAGGACTTCAGTGTAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTGAACAGTTTCATTTCTACTTGTGGGTTAGGACTTCAGTGTAGGA  400

seq1  ATTATCGTGGGCACAGTGCACTCCTTAACACCAGAAACATGATAGATGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCGTGGGCACAGTGCACTCCTTAACACCAGAAACATGATAGATGGT  450

seq1  CATTTGGGTTTCCTTCTAATTATAGGAATTCTTCTGAACTTAGGGAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGGTTTCCTTCTAATTATAGGAATTCTTCTGAACTTAGGGAGGAA  500

seq1  CAGTACATGAGTGTATGGTCTGATGCTATAAATCCTTGAGGGAGATAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACATGAGTGTATGGTCTGATGCTATAAATCCTTGAGGGAGATAAAA  550

seq1  ACAATGCTGTAGTTCCCTTCTCCCCATCTACAGACTTTAAGGGTAGTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCTGTAGTTCCCTTCTCCCCATCTACAGACTTTAAGGGTAGTGAC  600

seq1  TGCTTTTCTAGATTTTGTCTTGAATGACACTGAGTCTGTAGTGATTCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTCTAGATTTTGTCTTGAATGACACTGAGTCTGTAGTGATTCTCT  650

seq1  CACCATGGAATTC  663
      |||||||||||||
seq2  CACCATGGAATTC  663