BAC Information

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BAC

Clone NameB6Ng01-160B19
Chromosome14 (Build37)
Map Location 45,552,042 - 45,553,159
singlet/doubletsinglet
Overlap genenone
Upstream geneEar-ps10, EG630952, EG666621, LOC100041356, LOC100041364, LOC100041371, LOC100041376, Ear-ps2, Ang-ps1, Ear2, LOC100041393, LOC100041422, EG666638, 4930503E14Rik, EG666647, EG624862, EG666660, EG666667, EG546250, EG666675, LOC100041494, LOC100041497, EG666678, LOC676402, BC061237, LOC434476, EG666707, LOC100042570, LOC666723, LOC673290, EG666725, EG624966, EG666744, Ptgdr
Downstream genePtger2, LOC100041591, 5730420B22Rik, LOC100041611, 6330416L11Rik, Ero1l, Psmc6, Styx, Gnpnat1, Plekhc1, EG382884, Ddhd1, EG637379, LOC666834, LOC100041685
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160B19.bB6Ng01-160B19.g
ACCDH953574DH953575
length1,0821,165
definitionDH953574|Mus musculus domesticus DNA, BAC clone: B6Ng01-160B19, 5' end.DH953575|Mus musculus domesticus DNA, BAC clone: B6Ng01-160B19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgcatattataaaccacaatgcaagtataccacacaagccta
caggacaagtcattgtagaaagatctaactgtaccttaaaagaatcgcta
atagagctggagagatagctcagcagctaagagccctggctgctcttcca
aaggtcctaagttcaaatcccagcaatacacattgtggctcacaatcatc
tgtgatgagatctgatgccctcttctggggtgtctgaagacagctacagt
gagcagggcctgagcaagcagggctggagcaagagctggagagttggctc
agcgattaagagcactgactgctcttctggagatcctgagttcaaatccc
agcaaccacacagtagctcacaaccatttgtaatgtgttagaatcctact
gtcttcttgtgtgtctgaaaacagctacagtgtacttacatatgataaaa
catttttttaaaagttcaatattttaaaaaaggaaagaaatgcttataaa
gcaaaaaggaagaataaagatccccagggatggacgaaataatgctctgt
taatgttaaactctctgaacactaatgagaaaggaacaacaggggctaaa
agacactggattatagaaaagagtagaattaaatttacctacatactata
gggatatgttaacatcagaagtcagaaatgtattgtgctggggacatcaa
tttgttcatattaccacagaaaacgaaaagctgtggataccatcagatct
ttttaaaactctgggccctgacccaaacagagcaatgaagagcacctgac
caatcaggcatttccctggcagccagcaactcctagacagaaatatcagc
acctaaccacaggcaggcctatgggaaggacttggtctcctgcaaaggac
ctatcctcaatgcagctcacacagctatgagcaggacaacaaaatcatgc
tgatacagcatctgaaagccaagtagcacatagcaaagcttcaagagctg
ggacagagacagagactttgaaagatctgcaagccaagatgtagaagata
ggtgcccagaataagaaattcatgaagcagta
gaattcatagccaaaccttgtcaataaacagtgaatgatttaggaataga
tgggaaacttcatggtgcatgcagaattcagagttctggtctcaggaagt
aaagaatttttcttgaatggaaacactacaaaactctcagtagaatgcag
gaaaaggtggatgggcctcattcttactttgggcctactgtacccaaata
cagggagggattcatccctatactatttgattggaatgcatgctgcattg
ctttccaggctaagagaaaatcagctacccaaactataactattactttt
tcattacctattttctcaagttctacataaaggttattcatctgactacc
tgagagacagtgtgggcttctgactaccccaccatccccccagacacctt
ggatctttgtcatagtgatattgcatagctcaagatggtagacaaagaca
acacaatcaatttggaaaggctttacatgttttttccactattttactgg
agagtttaggtagcattttacaatgcactcagcacacccaggtcaagaag
gcagaaggaacagatgtcaatgccagagcccatcctgaaattatggatcc
attaaaattgaggtttcgctggacccaaggactgttcatcctctatccat
ccaattgagtcttaggtatcttatgaatacaggatcgtattccaatctcc
aacagactcaggcctagaactgggaactcaaaaaggtagaaactggagaa
gtgagagctaatgggactacgaagaagcaatccaaatccctgttggcctt
tgttcacagatgcctattttgtctggttgttttggagatagagagaatgt
ggggatttagcttttgaagaatggacataaagtttagaatttgatgttgc
cctgtccctgactcttctatgcagtacaggagtttcatgcaagaatgggg
tgtaatcaaagatttcatgaaaccatggctattatgacatgtctcctctc
agcagctgcacactaacacattactcaactgtgtaagtaggcaggatagt
ttctgtctctagaaccagaaccctggtatcgactgttgttcatgattgac
ctatatgaatttattggaatcgtctaagatcctagaagacgtatatccca
tgcttacaactttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_45552042_45553159
seq2: B6Ng01-160B19.b_46_1127

seq1  GAATTCTCTGCATATTATAAACCACAATGCAAGTATACCACACAAGCCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCATATTATAAACCACAATGCAAGTATACCACACAAGCCTA  50

seq1  CAGGACAAGTCATTGTAGAAAGATCTAACTGTACCTTAAAAGAATCGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAAGTCATTGTAGAAAGATCTAACTGTACCTTAAAAGAATCGCTA  100

seq1  ATAGAGCTGGAGAGATAGCTCAGCAGCTAAGAGCCCTGGCTGCTCTTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGCTGGAGAGATAGCTCAGCAGCTAAGAGCCCTGGCTGCTCTTCCA  150

seq1  AAGGTCCTAAGTTCAAATCCCAGCAATACACATTGTGGCTCACAATCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCCTAAGTTCAAATCCCAGCAATACACATTGTGGCTCACAATCATC  200

seq1  TGTGATGAGATCTGATGCCCTCTTCTGGGGTGTCTGAAGACAGCTACAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGAGATCTGATGCCCTCTTCTGGGGTGTCTGAAGACAGCTACAGT  250

seq1  GAGCAGGGCCTGAGCAAGCAGGGCTGGAGCAAGAGCTGGAGAGTTGGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGGGCCTGAGCAAGCAGGGCTGGAGCAAGAGCTGGAGAGTTGGCTC  300

seq1  AGCGATTAAGAGCACTGACTGCTCTTCTGGAGATCCTGAGTTCAAATCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGATTAAGAGCACTGACTGCTCTTCTGGAGATCCTGAGTTCAAATCCC  350

seq1  AGCAACCACACAGTAGCTCACAACCATTTGTAATGTGTTAGAATCCTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACCACACAGTAGCTCACAACCATTTGTAATGTGTTAGAATCCTACT  400

seq1  GTCTTCTGGTGTGTCTGAAAACAGCTACAGTGTACTTACATATGATAAAA  450
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTTGTGTGTCTGAAAACAGCTACAGTGTACTTACATATGATAAAA  450

seq1  CATTTTTTTAAAAGTTCAATATTTTAAAAAAGGAAAGAAATGCTTATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTTAAAAGTTCAATATTTTAAAAAAGGAAAGAAATGCTTATAAA  500

seq1  GCAAAAAGGAAGAATAAAGATCCCCAGGGATGGACGAAATAATGCTCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAAGGAAGAATAAAGATCCCCAGGGATGGACGAAATAATGCTCTGT  550

seq1  TAATGTTAAACTCTCTGAACACTAATGAGAAAGGAACAACAGGGGCTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTAAACTCTCTGAACACTAATGAGAAAGGAACAACAGGGGCTAAA  600

seq1  AGACACTGGATTATAGAAAAGAGTAGAATTAAATTTACCTACATACTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACTGGATTATAGAAAAGAGTAGAATTAAATTTACCTACATACTATA  650

seq1  GGGATATGTTAACATCAGAAGTCAGAAATGTATTGTGCTGGGGACATCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATATGTTAACATCAGAAGTCAGAAATGTATTGTGCTGGGGACATCAA  700

seq1  TTTGTTCATATTACCACAGAAAACGAAAAGCTGTGGATACCATCAGATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCATATTACCACAGAAAACGAAAAGCTGTGGATACCATCAGATCT  750

seq1  TTTTAAAACTCTGGGCCCTGACCCAAACAGAGCAATGAAGAGCACCTGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAACTCTGGGCCCTGACCCAAACAGAGCAATGAAGAGCACCTGAC  800

seq1  CAATCAGGGCATTTCCCTGGCAGCCAGCAACTCCTAGACAAGAAAATATC  850
      |||||| |||||||||||||||||||||||||||||||||   |||||||
seq2  CAATCA-GGCATTTCCCTGGCAGCCAGCAACTCCTAGACA--GAAATATC  847

seq1  AGCACCTAACCACAGGCAGGCCTATGGGAAGGACTTTGGTCTCCTGCAAA  900
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGCACCTAACCACAGGCAGGCCTATGGGAAGGAC-TTGGTCTCCTGCAAA  896

seq1  AGGGACCTATCCTCAATGCAGCTCAACAACAGGCTAATGAGCAGGACAAA  950
        |||||||||||||||||||||||   ||| ||| ||||||||||||| 
seq2  --GGACCTATCCTCAATGCAGCTCA--CACA-GCT-ATGAGCAGGACAA-  939

seq1  ACAAAAATCAATGCTGAATACAGCATCCTGAAAGCCCAAGTAGCAACCAT  1000
         |||||| |||||| ||||||||| ||||||| ||||||||||  |||
seq2  --CAAAATC-ATGCTG-ATACAGCAT-CTGAAAG-CCAAGTAGCA--CAT  981

seq1  AAGCAAAAGCTTCACAGAGCTGGGAACAGAGACCAAGAGACTTTGAAAAG  1050
       ||| ||||||||| ||||||||| ||||||||  |||||||||||||  
seq2  -AGC-AAAGCTTCA-AGAGCTGGG-ACAGAGAC--AGAGACTTTGAAA--  1023

seq1  AATCTGCAAAGCACAAGATGTTAGAAGATAAGGTGGCCCAGGAAATAAGA  1100
       |||||| |||| ||||||| |||||||| |||| ||||||  |||||||
seq2  GATCTGC-AAGC-CAAGATG-TAGAAGAT-AGGT-GCCCAG--AATAAGA  1066

seq1  AAATTTCATGAAGCAGTA  1118
      ||  ||||||||||||||
seq2  AA--TTCATGAAGCAGTA  1082