BAC Information

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BAC

Clone NameB6Ng01-160M17
Chromosome14 (Build37)
Map Location 13,622,383 - 13,724,907
singlet/doubletdoublet
Overlap geneCadps, EG432822
Upstream genePtprg, LOC100042441, 3830406C13Rik, EG667072, Fezf2
Downstream geneLOC100042022, LOC100042026, EG328354, Synpr, A430083B19Rik, EG382844, LOC100042045, Gm281
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160M17.bB6Ng01-160M17.g
ACCDH954074DH954075
length616662
definitionDH954074|Mus musculus domesticus DNA, BAC clone: B6Ng01-160M17, 5' end.DH954075|Mus musculus domesticus DNA, BAC clone: B6Ng01-160M17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,724,292 - 13,724,907)(13,622,383 - 13,623,040)
sequence
gaattcttatattcatctgcccttctgtgtccagaaaataatgtttcctg
tagttacccaatgattcctgtgtgtgggagtgaccatacatgttcaatgt
aaatctgagtatccttcaatctcttatgttctgcatgttggacacctata
ggtctctgtgttaaccatcatgttagtttagcaaaatggtagtagtagat
tctcctatatggcttatgaccattctaatcatgttctcggcccattaatg
gtggtagatgtgggttttacgttttggagcaaaacttaaaagcattcact
gattatcctcataatttttatgccactattgcaccaatgggaatgtctca
ccaggtcagttatttttgttgtacacaggggtgggcaggatacaactgat
gattttgtcctccagtatcatgcatgatactggatctgtaggcaggtctg
taaactagaccattttgttttactttcttatttatttttaaacatagatt
cttttctcatataatatatcccggttatagtttccgctccttctgcttcc
tctctacttcctctcccctccagatccattcagggccaaaaagtgggagt
gggtgggtaggggagt
gaattctcacctgaggaataccgaatggctgagaagcacctgaagaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattattggtg
gaattgcaagcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactgctggaggatcctacaatacctctcctgggc
atatatccagaagacctggcactttcaaggttgagttaactcatccacac
atatgcaaatgtggacttttagcatcaagtacactctagtctcagaggag
cgtaaaggagagcaagagttgtctatttctgaagccaaaatttaatcaac
agagtgaagactaagtctggacagattaggttacttttttgggagttgat
gggtggggttggtggcatggacttttcaccccaaaggctgtggggaagat
tctgaaaagtcataaaagcgacaaaccctagaaatttcatttgaaaaagg
aagaaagaagctgcacattttttccattccatagtgtcatggtgatcatt
ttccccagatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_13724292_13724907
seq2: B6Ng01-160M17.b_48_663 (reverse)

seq1  ACTCCCCTACCCACCCACTCCCACTTTTTGGCCCTGAATGGATCTGGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCCTACCCACCCACTCCCACTTTTTGGCCCTGAATGGATCTGGAGG  50

seq1  GGAGAGGAAGTAGAGAGGAAGCAGAAGGAGCGGAAACTATAACCGGGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGAAGTAGAGAGGAAGCAGAAGGAGCGGAAACTATAACCGGGATA  100

seq1  TATTATATGAGAAAAGAATCTATGTTTAAAAATAAATAAGAAAGTAAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATATGAGAAAAGAATCTATGTTTAAAAATAAATAAGAAAGTAAAAC  150

seq1  AAAATGGTCTAGTTTACAGACCTGCCTACAGATCCAGTATCATGCATGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGTCTAGTTTACAGACCTGCCTACAGATCCAGTATCATGCATGAT  200

seq1  ACTGGAGGACAAAATCATCAGTTGTATCCTGCCCACCCCTGTGTACAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGGACAAAATCATCAGTTGTATCCTGCCCACCCCTGTGTACAACA  250

seq1  AAAATAACTGACCTGGTGAGACATTCCCATTGGTGCAATAGTGGCATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAACTGACCTGGTGAGACATTCCCATTGGTGCAATAGTGGCATAAA  300

seq1  AATTATGAGGATAATCAGTGAATGCTTTTAAGTTTTGCTCCAAAACGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGAGGATAATCAGTGAATGCTTTTAAGTTTTGCTCCAAAACGTAA  350

seq1  AACCCACATCTACCACCATTAATGGGCCGAGAACATGATTAGAATGGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCACATCTACCACCATTAATGGGCCGAGAACATGATTAGAATGGTCA  400

seq1  TAAGCCATATAGGAGAATCTACTACTACCATTTTGCTAAACTAACATGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCATATAGGAGAATCTACTACTACCATTTTGCTAAACTAACATGAT  450

seq1  GGTTAACACAGAGACCTATAGGTGTCCAACATGCAGAACATAAGAGATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAACACAGAGACCTATAGGTGTCCAACATGCAGAACATAAGAGATTG  500

seq1  AAGGATACTCAGATTTACATTGAACATGTATGGTCACTCCCACACACAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATACTCAGATTTACATTGAACATGTATGGTCACTCCCACACACAGG  550

seq1  AATCATTGGGTAACTACAGGAAACATTATTTTCTGGACACAGAAGGGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATTGGGTAACTACAGGAAACATTATTTTCTGGACACAGAAGGGCAG  600

seq1  ATGAATATAAGAATTC  616
      ||||||||||||||||
seq2  ATGAATATAAGAATTC  616

seq1: chr14_13622383_13623040
seq2: B6Ng01-160M17.g_68_728

seq1  GAATTCTCACCTGAGGAATACCGAATGGCTGAGAAGCACCTGAAGAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTGAGGAATACCGAATGGCTGAGAAGCACCTGAAGAAATG  50

seq1  TTCAGCATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT  100

seq1  TCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC  150

seq1  AGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTATTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTATTGGTG  200

seq1  GAATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCAGTTCCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCAGTTCCTCA  250

seq1  GAAAATTGGACATAGTACTGCTGGAGGATCCTACAATACCTCTCCTGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTGGACATAGTACTGCTGGAGGATCCTACAATACCTCTCCTGGGC  300

seq1  ATATATCCAGAAGACCTGGCACTTTCAAGGTTGAGTTAACTCATCCACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCCAGAAGACCTGGCACTTTCAAGGTTGAGTTAACTCATCCACAC  350

seq1  ATATGCAAATGTGGACTTTTAGCATCAAGTACACTCTAGTCTCAGAGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCAAATGTGGACTTTTAGCATCAAGTACACTCTAGTCTCAGAGGAG  400

seq1  CGTAAAGGAGAGCAAGAGTTGTCTATTTCTGAAGCCAAAATTTAATCAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAAAGGAGAGCAAGAGTTGTCTATTTCTGAAGCCAAAATTTAATCAAC  450

seq1  AGAGTGAAGACTAAGTCTGGACAGATTAGGTTACTTTTTTGGGAGTTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGAAGACTAAGTCTGGACAGATTAGGTTACTTTTTTGGGAGTTGAT  500

seq1  GGGTGGGGTTGGTGGCATGGAC-TTTCACCCCAAAGGCTGTGGGGAAGAT  549
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GGGTGGGGTTGGTGGCATGGACTTTTCACCCCAAAGGCTGTGGGGAAGAT  550

seq1  TCTGAAAAGTCATAAAAGCGACAAACCCTAGAAATTTCATTTGAAAAAGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAAGTCATAAAAGCGACAAACCCTAGAAATTTCATTTGAAAAAGG  600

seq1  AAGAAAGAAGCTGCACA-TTTTTCCATTCAATAGTGTCATGGTGATCA-T  647
      ||||||||||||||||| ||||||||||| |||||||||||||||||| |
seq2  AAGAAAGAAGCTGCACATTTTTTCCATTCCATAGTGTCATGGTGATCATT  650

seq1  TTCCCCAGATG  658
      |||||||||||
seq2  TTCCCCAGATG  661