BAC Information

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BAC

Clone NameB6Ng01-161K21
Chromosome14 (Build37)
Map Location 121,165,437 - 121,425,466
singlet/doubletdoublet
Overlap geneLOC668837, Ranbp5
Upstream geneHs6st3, LOC100043830, Oxgr1, Gabarapl2-ps, LOC100043831, Mbnl2, Rap2a, LOC668835
Downstream geneFarp1, LOC100043837, Stk24, Slc15a1, LOC100043577, Dock9, LOC668843, Phgdhl1, Gpr18, Ebi2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-161K21.bB6Ng01-161K21.g
ACCDH954727DH954728
length982419
definitionDH954727|Mus musculus domesticus DNA, BAC clone: B6Ng01-161K21, 5' end.DH954728|Mus musculus domesticus DNA, BAC clone: B6Ng01-161K21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,424,486 - 121,425,466)(121,165,437 - 121,165,861)
sequence
gaattccacatggtggcagccctagatgaagagccacaggtggccgatgc
ctgcagagagagggggcgtcaggtgagctcccatgcaggttacaacccaa
agcggtcaccatgggcatgtatacatacagttagatggctcagtgcatta
tatacacatgtgtgcatatgtatacacgcacacatgtgcatacatgtaac
aataacgaagagatcatgggtttaggagtggacctggaaggagctggagg
agaacagaaggatgggagtgttgtacacacactgctagtgagggaagttc
tttttttttttcaattttttattaggtattttcttcatttacatttcaaa
tgctatcccgaaagtcccctataccctcccccaccccctgctcctctacc
cacccactcgcagtgagagaagttcttaaaaaataaaattactaccctct
atagacagtaagaactttactttttcccctctttactttccctactagag
cgcgatgagaaatttaggaggagcgcgtaagaaagctgtaggctgtagcc
ctttagaatctggcccatgatgtccttcaggagagggtctaccactcgtg
ataggaacttggagtgttttcattgttcagaagtgcactgctttctggct
tggcagctgccgcatgagctcactgctgtggaattgcaacgagttgattt
ctgagaggtagagaacagaacggggtttccagagcctggagcaggggcag
tgagagccaggtggtagaggaaggttgggtgaccatgtgataagaagctt
atgaaatagtactatagttgtagcaacttgtagtatactgaatcttttag
tagaagaggtttaaataattttaccttaaagaaataataaaagcctgaag
gtaatagataatgtccactcaaattgggacagactccctctcccctcaca
actcctttgtgtgtgtcaattgtgtgtatatg
ctttctgtggcacaagtcaagatctaggtttccccatcagagatctctga
aaagacatgatcgggctacctggctgttaacatctgctgctgctgctgct
gctgctgctgctgctgctgctgctgctgctgctgctgctgctgacaatct
gaagtaatgggtctgagatggaaatgcgacagatagaagagatatgaaac
ttgcatatcataatgtaacgtgggctacacggatacttggcatcactagt
aagaaatagtgaaaagggtgagtcgccagcaaccttcccagcacctattc
ccaatatcggcattatgcggtgtggccatctgcctagctcagctcagcca
atgaggggccagctacccagctcagccaatgagaggccaactgcccagct
cagccaatgggaggggggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_121424486_121425466
seq2: B6Ng01-161K21.b_47_1028 (reverse)

seq1  CATATACACACAAATAGACACACACAAAGGAAGTTGTGA-GAGAGAGAGA  49
      ||||||||||| ||| |||||||||||||| |||||||| | ||||| ||
seq2  CATATACACAC-AATTGACACACACAAAGG-AGTTGTGAGGGGAGAGGGA  48

seq1  GTCTGTCCCAATTTGAGT-GACATTATCTATTACC-TCAAGCTTTTATTA  97
      |||||||||||||||||| |||||||||||||||| ||| ||||||||||
seq2  GTCTGTCCCAATTTGAGTGGACATTATCTATTACCTTCAGGCTTTTATTA  98

seq1  TTTCTTTAAGGTAAAAATATTTAAACCTCTTCTACTAAAAAAATTCAGTA  147
      |||||||||||||||| ||||||||||||||||||| |||| ||||||||
seq2  TTTCTTTAAGGTAAAATTATTTAAACCTCTTCTACT-AAAAGATTCAGTA  147

seq1  TACTACAAGTTGCTACAACTATAGTACTA-TTCAATAGCTTCTTATCACA  196
      ||||||||||||||||||||||||||||| ||||  ||||||||||||||
seq2  TACTACAAGTTGCTACAACTATAGTACTATTTCATAAGCTTCTTATCACA  197

seq1  TGGTCACCCAACCTTCCTCTACCACCTGGCTCTCACTGCCCCTGCTCCAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCACCCAACCTTCCTCTACCACCTGGCTCTCACTGCCCCTGCTCCAG  247

seq1  GCTCTGGAAACCCCGTTCTGTTCTCTACCTCTCAGAAATCAACTCGTTGC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGAAACCCCGTTCTGTTCTCTACCTCTCAGAAATCAACTCGTTGC  297

seq1  AATTCCACAGCAGTGAGCTCATGCGGCAGCTGCCAAGCCAGAAAGCAGTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCACAGCAGTGAGCTCATGCGGCAGCTGCCAAGCCAGAAAGCAGTG  347

seq1  CACTTCTGAACAATGAAAACACTCCAAGTTCCTATCACGAGTGGTAGACC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTGAACAATGAAAACACTCCAAGTTCCTATCACGAGTGGTAGACC  397

seq1  CTCTCCTGAAGGACATCATGGGCCAGATTCTAAAGGGCTACAGCCTACAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTGAAGGACATCATGGGCCAGATTCTAAAGGGCTACAGCCTACAG  447

seq1  CTTTCTTACGCGCTCCTCCTAAATTTCTCATCGCGCTCTAGTAGGGAAAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTACGCGCTCCTCCTAAATTTCTCATCGCGCTCTAGTAGGGAAAG  497

seq1  TAAAGAGGGGAAAAAGTAAAGTTCTTACTGTCTATAGAGGGTAGTAATTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGGGGAAAAAGTAAAGTTCTTACTGTCTATAGAGGGTAGTAATTT  547

seq1  TATTTTTTAAGAACTTCTCTCACTGCGAGTGGGTGGGTAGAGGAGCAGGG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTAAGAACTTCTCTCACTGCGAGTGGGTGGGTAGAGGAGCAGGG  597

seq1  GGTGGGGGAGGGTATAGGGGACTTTCGGGATAGCATTTGAAATGTAAATG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGGGAGGGTATAGGGGACTTTCGGGATAGCATTTGAAATGTAAATG  647

seq1  AAGAAAATACCTAATAAAAAATTGAAAAAAAAAAAGAACTTCCCTCACTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATACCTAATAAAAAATTGAAAAAAAAAAAGAACTTCCCTCACTA  697

seq1  GCAGTGTGTGTACAACACTCCCATCCTTCTGTTCTCCTCCAGCTCCTTCC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGTGTGTACAACACTCCCATCCTTCTGTTCTCCTCCAGCTCCTTCC  747

seq1  AGGTCCACTCCTAAACCCATGATCTCTTCGTTATTGTTACATGTATGCAC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCACTCCTAAACCCATGATCTCTTCGTTATTGTTACATGTATGCAC  797

seq1  ATGTGTGCGTGTATACATATGCACACATGTGTATATAATGCACTGAGCCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGCGTGTATACATATGCACACATGTGTATATAATGCACTGAGCCA  847

seq1  TCTAACTGTATGTATACATGCCCATGGTGACCGCTTTGGGTTGTAACCTG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACTGTATGTATACATGCCCATGGTGACCGCTTTGGGTTGTAACCTG  897

seq1  CATGGGAGCTCACCTGACGCCCCCTCTCTCTGCAGGCATCGGCCACCTGT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGAGCTCACCTGACGCCCCCTCTCTCTGCAGGCATCGGCCACCTGT  947

seq1  GGCTCTTCATCTAGGGCTGCCACCATGTGGAATTC  981
      |||||||||||||||||||||||||||||||||||
seq2  GGCTCTTCATCTAGGGCTGCCACCATGTGGAATTC  982

seq1: chr14_121165437_121165861
seq2: B6Ng01-161K21.g_67_491

seq1  GAATTCCTTTCTGTGGCACAAGTCAAGATCTAGGTTTCCCCATCAGAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTCTGTGGCACAAGTCAAGATCTAGGTTTCCCCATCAGAGAT  50

seq1  CTCTGAAAAGACATGATCGGGCTACCTGGCTGTTAACATCTGCTGCTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAAAAGACATGATCGGGCTACCTGGCTGTTAACATCTGCTGCTGCT  100

seq1  GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGA  150

seq1  CAATCTGAAGTAATGGGTCTGAGATGGAAATGCGACAGATAGAAGAGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTGAAGTAATGGGTCTGAGATGGAAATGCGACAGATAGAAGAGATA  200

seq1  TGAAACTTGCATATCATAATGTAACGTGGGCTACACGGATACTTGGCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTTGCATATCATAATGTAACGTGGGCTACACGGATACTTGGCATC  250

seq1  ACTAGTAAGAAATAGTGAAAAGGGTGAGTCGCCAGCAACCTTCCCAGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTAAGAAATAGTGAAAAGGGTGAGTCGCCAGCAACCTTCCCAGCAC  300

seq1  CTATTCCCAATATCGGCATTATGCGGTGTGGCCATCTGCCTAGCTCAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCCCAATATCGGCATTATGCGGTGTGGCCATCTGCCTAGCTCAGCT  350

seq1  CAGCCAATGAGGGGCCAGCTACCCAGCTCAGCCAATGAGAGGCCAACTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAATGAGGGGCCAGCTACCCAGCTCAGCCAATGAGAGGCCAACTGC  400

seq1  CCAGCTCAGCCAATGGGAGGGGGGC  425
      |||||||||||||||||||||||||
seq2  CCAGCTCAGCCAATGGGAGGGGGGC  425